RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 TRMT10CQ7L0Y3 403 aaKnown RBP16.87■□□□□ 0.29
VARS2-207ENST00000476162 PRUNE1Q86TP1 453 aa16.87■□□□□ 0.29
VARS2-207ENST00000476162 C3orf20Q8ND61 904 aa16.87■□□□□ 0.29
VARS2-207ENST00000476162 MDM1Q8TC05 714 aa16.87■□□□□ 0.29
VARS2-207ENST00000476162 ZNF473Q8WTR7 871 aaKnown RBP16.87■□□□□ 0.29
VARS2-207ENST00000476162 SLITRK1Q96PX8 696 aa16.87■□□□□ 0.29
VARS2-207ENST00000476162 BCO2Q9BYV7 579 aa16.87■□□□□ 0.29
VARS2-207ENST00000476162 DNAJC17Q9NVM6 304 aaKnown RBP16.87■□□□□ 0.29
VARS2-207ENST00000476162 TJP2Q9UDY2 1190 aa16.87■□□□□ 0.29
VARS2-207ENST00000476162 ANAPC5Q9UJX4 755 aa16.87■□□□□ 0.29
VARS2-207ENST00000476162 PDHXO00330 501 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 MAGEB2O15479 319 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 FAM107AO95990 144 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 ATF7P17544 494 aaPredicted RBP16.86■□□□□ 0.29
VARS2-207ENST00000476162 RAD23BP54727 409 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 CCNA1P78396 465 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 TAP1Q03518 808 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 PIGHQ14442 188 aaPredicted RBP16.86■□□□□ 0.29
VARS2-207ENST00000476162 PTPN20Q4JDL3 420 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 FAM228AQ86W67 206 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 LINC01465Q8N7H1 131 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 PPTC7Q8NI37 304 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 ACSF2Q96CM8 615 aaPredicted RBP16.86■□□□□ 0.29
VARS2-207ENST00000476162 RBM41Q96IZ5 413 aaKnown RBP16.86■□□□□ 0.29
VARS2-207ENST00000476162 TMEM109Q9BVC6 243 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 TRAIPQ9BWF2 469 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 PDZD7Q9H5P4 517 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 CYTH4Q9UIA0 394 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 MGAMO43451 1857 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 ANK1P16157 1881 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 SRRM3A6NNA2 597 aaPredicted RBP16.86■□□□□ 0.29
VARS2-207ENST00000476162 GOLGA8SH3BPF8 625 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 TRAPPC3O43617 180 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 ACSL3O95573 720 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 MCF2P10911 925 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 MKRN3Q13064 507 aaKnown RBP16.86■□□□□ 0.29
VARS2-207ENST00000476162 SNCBQ16143 134 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 LRRC38Q5VT99 294 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 CCDC89Q8N998 374 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 PWWP2AQ96N64 755 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 C16orf70Q9BSU1 422 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 SMYD3Q9H7B4 428 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 ZNF408Q9H9D4 720 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 VTA1Q9NP79 307 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 GGA2Q9UJY4 613 aa16.86■□□□□ 0.29
VARS2-207ENST00000476162 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.85■□□□□ 0.29
VARS2-207ENST00000476162 GMNCA6NCL1 334 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 RASGRF2O14827 1237 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 MED7O43513 233 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 ARF4P18085 180 aaPredicted RBP16.85■□□□□ 0.29
VARS2-207ENST00000476162 RFC1P35251 1148 aaPredicted RBP16.85■□□□□ 0.29
VARS2-207ENST00000476162 TNFAIP2Q03169 654 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 SLC10A6Q3KNW5 377 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 GSTA5Q7RTV2 222 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 IFNLR1Q8IU57 520 aaPredicted RBP16.85■□□□□ 0.29
VARS2-207ENST00000476162 ARMC2Q8NEN0 867 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 CXorf38Q8TB03 319 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 RAPGEF5Q92565 580 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 TWNKQ96RR1 684 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 LHX5Q9H2C1 402 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 CNOT10Q9H9A5 744 aaKnown RBP16.85■□□□□ 0.29
VARS2-207ENST00000476162 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.85■□□□□ 0.29
VARS2-207ENST00000476162 HMGXB4Q9UGU5 601 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 STRIP2Q9ULQ0 834 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 TJP3O95049 919 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 PAEPP09466 180 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 CDR1P51861 262 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 CAV1Q03135 178 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 SPOCD1Q6ZMY3 1216 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 CROCCP2Q86T23 111 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 CEP57Q86XR8 500 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 PARP9Q8IXQ6 854 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 NIPA2Q8N8Q9 360 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 SLC4A11Q8NBS3 891 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 GTF3C2Q8WUA4 911 aaPredicted RBP16.85■□□□□ 0.29
VARS2-207ENST00000476162 DNPEPQ9ULA0 475 aa16.85■□□□□ 0.29
VARS2-207ENST00000476162 LIASO43766 372 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 ITGBL1O95965 494 aaPredicted RBP16.84■□□□□ 0.29
VARS2-207ENST00000476162 AGTP01019 485 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 KRT3P12035 628 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 EZRP15311 586 aaKnown RBP16.84■□□□□ 0.29
VARS2-207ENST00000476162 IBSPP21815 317 aaPredicted RBP16.84■□□□□ 0.29
VARS2-207ENST00000476162 POLR2BP30876 1174 aaKnown RBP16.84■□□□□ 0.29
VARS2-207ENST00000476162 AUHQ13825 339 aaKnown RBP16.84■□□□□ 0.29
VARS2-207ENST00000476162 MTHFD1LQ6UB35 978 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 JOSD2Q8TAC2 188 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 NLRP7Q8WX94 980 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 KATNBL1Q9H079 304 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 RBM47A0AV96 593 aaKnown RBP16.84■□□□□ 0.29
VARS2-207ENST00000476162 LRRD1A4D1F6 860 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 SIGLEC16A6NMB1 481 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 BTBD19C9JJ37 291 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 H3BRB1 525 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 SNAI1O95863 264 aaPredicted RBP16.84■□□□□ 0.29
VARS2-207ENST00000476162 KLRC2P26717 231 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 PSMC1P62191 440 aaKnown RBP16.84■□□□□ 0.29
VARS2-207ENST00000476162 LONRF1Q17RB8 773 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 RNF187Q5TA31 235 aaPredicted RBP16.84■□□□□ 0.29
VARS2-207ENST00000476162 EMID1Q96A84 441 aaPredicted RBP16.84■□□□□ 0.29
VARS2-207ENST00000476162 MS4A4AQ96JQ5 239 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms