RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 HINFPQ9BQA5 517 aa12.23□□□□□ -0.45
NUDCD3-206ENST00000475952 ACBD6Q9BR61 282 aa12.23□□□□□ -0.45
NUDCD3-206ENST00000475952 GPR88Q9GZN0 384 aa12.23□□□□□ -0.45
NUDCD3-206ENST00000475952 DNAJC25Q9H1X3 360 aa12.23□□□□□ -0.45
NUDCD3-206ENST00000475952 GDPD2Q9HCC8 539 aa12.23□□□□□ -0.45
NUDCD3-206ENST00000475952 DDX43Q9NXZ2 648 aaKnown RBP12.23□□□□□ -0.45
NUDCD3-206ENST00000475952 ABI2Q9NYB9 513 aaPredicted RBP12.23□□□□□ -0.45
NUDCD3-206ENST00000475952 SIX4Q9UIU6 781 aa12.23□□□□□ -0.45
NUDCD3-206ENST00000475952 FRYQ5TBA9 3013 aa12.23□□□□□ -0.45
NUDCD3-206ENST00000475952 ASPMQ8IZT6 3477 aa12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 KRBA1A5PL33 1030 aa12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 GOLGA6L4A6NEF3 574 aa12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 STK25O00506 426 aa12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 PCSK1P29120 753 aa12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 LHX1P48742 406 aa12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 TAF12Q16514 161 aa12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 INTS6LQ5JSJ4 861 aaKnown RBP12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 TRAPPC11Q7Z392 1133 aa12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 TMC8Q8IU68 726 aa12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 DCLK2Q8N568 766 aa12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 TTC9BQ8N6N2 239 aa12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 RUBCNQ92622 972 aa12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 SHDQ96IW2 340 aa12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 RPP25Q9BUL9 199 aaKnown RBP12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 SLITRK6Q9H5Y7 841 aa12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 TBC1D17Q9HA65 648 aa12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 ZFP14Q9HCL3 533 aa12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 PCDHB5Q9Y5E4 795 aa12.22□□□□□ -0.45
NUDCD3-206ENST00000475952 A0A1W2PRU2 124 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 PDXKO00764 312 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 CALUO43852 315 aaPredicted RBP12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 MOSPD3O75425 235 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 SOAT2O75908 522 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 RHOBTB3O94955 611 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 CLSTN1O94985 981 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 ZNF202O95125 648 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 PRR29P0C7W0 189 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 GJA1P17302 382 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 ATF6P18850 670 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 FCARP24071 287 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 GABRR2P28476 465 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 GPC5P78333 572 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 DPYDQ12882 1025 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 TRPC3Q13507 836 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 TEAD2Q15562 447 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 RSPO4Q2I0M5 234 aaPredicted RBP12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 ARHGAP15Q53QZ3 475 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 FAM78AQ5JUQ0 283 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 DNAJB7Q7Z6W7 309 aaPredicted RBP12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 LRRTM3Q86VH5 581 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 SLC9A9Q8IVB4 645 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 SHKBP1Q8TBC3 707 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 ZSCAN18Q8TBC5 510 aaPredicted RBP12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 TMEM174Q8WUU8 243 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 DNASE1L2Q92874 299 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 SMARCD2Q92925 531 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 E2F7Q96AV8 911 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 ASB16Q96NS5 453 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 LPIN3Q9BQK8 851 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 LRRC3Q9BY71 257 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 KCTD10Q9H3F6 313 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 GOLPH3LQ9H4A5 285 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 ABCB6Q9NP58 842 aa12.21□□□□□ -0.45
NUDCD3-206ENST00000475952 ATG2BQ96BY7 2078 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 ZZEF1O43149 2961 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 GABRDO14764 452 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 NR3C1P04150 777 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 SP9P0CG40 484 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 HAPLN1P10915 354 aaPredicted RBP12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 PSMC3P17980 439 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 ACAT1P24752 427 aaKnown RBP12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 CDC25CP30307 473 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 AP3M2P53677 418 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 TNNC1P63316 161 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 PRKCQQ04759 706 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 BIRC3Q13489 604 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 SNW1Q13573 536 aaKnown RBP12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 KCNB1Q14721 858 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 MLF2Q15773 248 aaPredicted RBP12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 SOWAHAQ2M3V2 549 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 TANGO2Q6ICL3 276 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 PHLDB3Q6NSJ2 640 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 ZC3H14Q6PJT7 736 aaKnown RBP12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 C4orf50Q6ZRC1 276 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 OSTM1Q86WC4 334 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 SPATA2LQ8IUW3 424 aaPredicted RBP12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 DEPDC1BQ8WUY9 529 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 FUBP3Q96I24 572 aaKnown RBP eCLIP12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 MMS19Q96T76 1030 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 PI4K2AQ9BTU6 479 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 ATXN3LQ9H3M9 355 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 DLGAP2Q9P1A6 1054 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 ZMYM5Q9UJ78 669 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 ATRXP46100 2492 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 KIAA1549LQ6ZVL6 1849 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 CEP295Q9C0D2 2601 aa12.2□□□□□ -0.46
NUDCD3-206ENST00000475952 NRG2O14511 850 aaPredicted RBP12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 PHACTR2O75167 634 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 STAU1O95793 577 aaKnown RBP12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 WARSP23381 471 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms