RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 WDTC1Q8N5D0 677 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 C3orf58Q8NDZ4 430 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 SPATA18Q8TC71 538 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 UBE2Q2Q8WVN8 375 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 PAWRQ96IZ0 340 aaKnown RBP14.55□□□□□ -0.08
TRAF4-210ENST00000475329 PAAF1Q9BRP4 392 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 DPEP3Q9H4B8 488 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 ABCB6Q9NP58 842 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 TMEM39AQ9NV64 488 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 PARVAQ9NVD7 372 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 HESX1Q9UBX0 185 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 CHORDC1Q9UHD1 332 aaPredicted RBP14.55□□□□□ -0.08
TRAF4-210ENST00000475329 ANAPC7Q9UJX3 599 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 TSPAN16Q9UKR8 245 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 STXBP5LQ9Y2K9 1186 aa14.55□□□□□ -0.08
TRAF4-210ENST00000475329 PTPRDP23468 1912 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 CES2O00748 559 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 GABRDO14764 452 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 SRGAP2O75044 1071 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 PDGFRBP09619 1106 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 SETSIPP0DME0 302 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 RFC2P35250 354 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 LHX1P48742 406 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 TAP1Q03518 808 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 DSC1Q08554 894 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 PDCLQ13371 301 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 MESDQ14696 234 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 PTPN20Q4JDL3 420 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 C2CD6Q53TS8 623 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 PPP1R26Q5T8A7 1209 aaPredicted RBP14.54□□□□□ -0.08
TRAF4-210ENST00000475329 DNAJC24Q6P3W2 148 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 DCLRE1AQ6PJP8 1040 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 NECAB2Q7Z6G3 386 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 C12orf29Q8N999 325 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 IPO4Q8TEX9 1081 aaKnown RBP14.54□□□□□ -0.08
TRAF4-210ENST00000475329 RABGGTAQ92696 567 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 CAPZA3Q96KX2 299 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 FAM193BQ96PV7 902 aaPredicted RBP14.54□□□□□ -0.08
TRAF4-210ENST00000475329 SYNCQ9H7C4 482 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 FAM49BQ9NUQ9 324 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 TBC1D13Q9NVG8 400 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 PACSIN2Q9UNF0 486 aaPredicted RBP14.54□□□□□ -0.08
TRAF4-210ENST00000475329 PATJQ8NI35 1801 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 ALPK3Q96L96 1907 aa14.54□□□□□ -0.08
TRAF4-210ENST00000475329 NLRC5Q86WI3 1866 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 MIF4GDA9UHW6 222 aaKnown RBP14.53□□□□□ -0.08
TRAF4-210ENST00000475329 CTIFO43310 598 aaKnown RBP14.53□□□□□ -0.08
TRAF4-210ENST00000475329 HCRTO43612 131 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 B3GAT3O94766 335 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 IGFBP6P24592 240 aaPredicted RBP14.53□□□□□ -0.08
TRAF4-210ENST00000475329 LMO2P25791 158 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 GPD2P43304 727 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 DNA2P51530 1060 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 GSCP56915 257 aaPredicted RBP14.53□□□□□ -0.08
TRAF4-210ENST00000475329 RNASELQ05823 741 aaKnown RBP14.53□□□□□ -0.08
TRAF4-210ENST00000475329 MAMLD1Q13495 774 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 PTPROQ16827 1216 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 LRRC26Q2I0M4 334 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 TCTN1Q2MV58 587 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 TIGD5Q53EQ6 642 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 CYP4A22Q5TCH4 519 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 LLGL2Q6P1M3 1020 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 CNKSR3Q6P9H4 555 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 DEFB128Q7Z7B8 93 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 PHLDB2Q86SQ0 1253 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 METTL23Q86XA0 190 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 B3GALNT2Q8NCR0 500 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 C3orf20Q8ND61 904 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 UBA3Q8TBC4 463 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 RSPH1Q8WYR4 309 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 HES6Q96HZ4 224 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 PBKQ96KB5 322 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 PSMB7Q99436 277 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 MIS12Q9H081 205 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 DDX43Q9NXZ2 648 aaKnown RBP14.53□□□□□ -0.08
TRAF4-210ENST00000475329 WDR35Q9P2L0 1181 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 CYTH4Q9UIA0 394 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 LCMT1Q9UIC8 334 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 DSEQ9UL01 958 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 VWA8A3KMH1 1905 aa14.53□□□□□ -0.08
TRAF4-210ENST00000475329 CTAGE15A4D2H0 777 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 EFCAB8A8MWE9 144 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 TMEM189-UBE2V1I3L0A0 370 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 M0QZQ0 153 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 ZNF185O15231 689 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 SPOPO43791 374 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 TADA3O75528 432 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 DDHD2O94830 711 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 CTAGE8P0CG41 777 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 CCDC130P13994 396 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 CXCR5P32302 372 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 GABRB2P47870 512 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 BCAT1P54687 386 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 PKDCCQ504Y2 493 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 CCDC181Q5TID7 509 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 CTAGE6Q86UF2 777 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 NPAS4Q8IUM7 802 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 CTAGE4Q8IX94 777 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 LRRN4CLQ8ND94 238 aa14.52□□□□□ -0.09
TRAF4-210ENST00000475329 FEZF2Q8TBJ5 459 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms