RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 NAP1L1P55209 391 aaKnown RBP12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 MYO1EQ12965 1108 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 DUSP4Q13115 394 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 DUOXA2Q1HG44 320 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 CENPPQ6IPU0 288 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 GRAMD1CQ8IYS0 662 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 DCP1BQ8IZD4 617 aaKnown RBP12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 TMEM86AQ8N2M4 240 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 OR10T2Q8NGX3 314 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 SPATA18Q8TC71 538 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 FNBP1Q96RU3 617 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 MTMR12Q9C0I1 747 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 ZCWPW1Q9H0M4 648 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 CXorf56Q9H5V9 222 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 ASAH2Q9NR71 780 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 UTP6Q9NYH9 597 aaKnown RBP12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 ASB3Q9Y575 518 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 KLRC4O43908 158 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 HUS1O60921 280 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 AVPR2P30518 371 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 TUFMP49411 452 aaKnown RBP12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 NDUFA8P51970 172 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 EPHA5P54756 1037 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 IRX1P78414 480 aaPredicted RBP12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 SLC5A9Q2M3M2 681 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 KMT5BQ4FZB7 885 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 SLC39A12Q504Y0 691 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 PRSS36Q5K4E3 855 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 WSCD1Q658N2 575 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 PARM1Q6UWI2 310 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 FSIP1Q8NA03 581 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 SPPL2BQ8TCT7 592 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 FGF14Q92915 247 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 CHAMP1Q96JM3 812 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 SLC2A4RGQ9NR83 387 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 GDAP2Q9NXN4 497 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 CEP72Q9P209 647 aa12.35□□□□□ -0.43
HLA-DOB-208ENST00000475235 UQCRHLA0A096LP55 91 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 BICDL2A1A5D9 508 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 CLIC2O15247 247 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 NARSO43776 548 aaKnown RBP12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 EXOC3O60645 756 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 FGF19O95750 216 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 PDGFBP01127 241 aaPredicted RBP12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 RPN1P04843 607 aaKnown RBP12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 UQCRHP07919 91 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 CFHP08603 1231 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 CYP2J2P51589 502 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 CLCN5P51795 746 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 MYL7Q01449 175 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 TSPY1Q01534 308 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 BFSP1Q12934 665 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 STK4Q13043 487 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 PSMD6Q15008 389 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 NFE2Q16621 373 aaPredicted RBP12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 DPH6Q7L8W6 267 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 ITIH5Q86UX2 942 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 TOP6BLQ8N6T0 577 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 RDH13Q8NBN7 331 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 ATAD1Q8NBU5 361 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 TMEM174Q8WUU8 243 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 ING5Q8WYH8 240 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 MCRS1Q96EZ8 462 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 TMEM209Q96SK2 561 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 RTP3Q9BQQ7 232 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 ACBD6Q9BR61 282 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 GPR88Q9GZN0 384 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 CWC15Q9P013 229 aaKnown RBP12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 SIX4Q9UIU6 781 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 SNX9Q9Y5X1 595 aa12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 PDCD11Q14690 1871 aaKnown RBP12.34□□□□□ -0.43
HLA-DOB-208ENST00000475235 GOLGA6L4A6NEF3 574 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 ECI2O75521 394 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 VNN2O95498 520 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 DLATP10515 647 aaKnown RBP12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 CEBPBP17676 345 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 TNNI1P19237 187 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 LHX1P48742 406 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 VCPP55072 806 aaKnown RBP12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 CYP24A1Q07973 514 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 VEPH1Q14D04 833 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 MGAT5BQ3V5L5 792 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 LMBRD2Q68DH5 695 aaPredicted RBP12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 SASS6Q6UVJ0 657 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 ZSCAN30Q86W11 494 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 SIX5Q8N196 739 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 PDCL2Q8N4E4 241 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 KIAA0895Q8NCT3 520 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 OR5B17Q8NGF7 314 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 CCDC127Q96BQ5 260 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 HPDLQ96IR7 371 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 CGRRF1Q99675 332 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 SEPT5Q99719 369 aaPredicted RBP12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 CRISPLD1Q9H336 500 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 DDX43Q9NXZ2 648 aaKnown RBP12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 L1RE1Q9UN81 338 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 SLC27A5Q9Y2P5 690 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 C2orf16Q68DN1 1984 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 PTPRJQ12913 1337 aa12.33□□□□□ -0.44
HLA-DOB-208ENST00000475235 PDXKO00764 312 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms