RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 TRIM68Q6AZZ1 485 aa26.82■■□□□ 1.88
TMEM54-205ENST00000475208 STRA6Q9BX79 667 aa26.82■■□□□ 1.88
TMEM54-205ENST00000475208 EBF3Q9H4W6 596 aa26.82■■□□□ 1.88
TMEM54-205ENST00000475208 MRPL44Q9H9J2 332 aaKnown RBP26.82■■□□□ 1.88
TMEM54-205ENST00000475208 SEL1LQ9UBV2 794 aa26.82■■□□□ 1.88
TMEM54-205ENST00000475208 MAGED2Q9UNF1 606 aaPredicted RBP26.82■■□□□ 1.88
TMEM54-205ENST00000475208 EXOC7Q9UPT5 735 aa26.82■■□□□ 1.88
TMEM54-205ENST00000475208 DENND4CQ5VZ89 1909 aa26.81■■□□□ 1.88
TMEM54-205ENST00000475208 PRPF40AO75400 957 aaKnown RBP26.81■■□□□ 1.88
TMEM54-205ENST00000475208 NFE2Q16621 373 aaPredicted RBP26.81■■□□□ 1.88
TMEM54-205ENST00000475208 TMEM196Q5HYL7 178 aa26.81■■□□□ 1.88
TMEM54-205ENST00000475208 TXNDC8Q6A555 127 aa26.81■■□□□ 1.88
TMEM54-205ENST00000475208 FSTL4Q6MZW2 842 aa26.81■■□□□ 1.88
TMEM54-205ENST00000475208 BRSK2Q8IWQ3 736 aa26.81■■□□□ 1.88
TMEM54-205ENST00000475208 PDCL2Q8N4E4 241 aa26.81■■□□□ 1.88
TMEM54-205ENST00000475208 MRPS31Q92665 395 aaKnown RBP26.81■■□□□ 1.88
TMEM54-205ENST00000475208 SAAL1Q96ER3 474 aa26.81■■□□□ 1.88
TMEM54-205ENST00000475208 KIF9Q9HAQ2 790 aa26.81■■□□□ 1.88
TMEM54-205ENST00000475208 TDP1Q9NUW8 608 aa26.81■■□□□ 1.88
TMEM54-205ENST00000475208 TBC1D7Q9P0N9 293 aa26.81■■□□□ 1.88
TMEM54-205ENST00000475208 CCDC39Q9UFE4 941 aa26.81■■□□□ 1.88
TMEM54-205ENST00000475208 L1RE1Q9UN81 338 aa26.81■■□□□ 1.88
TMEM54-205ENST00000475208 AGAP1Q9UPQ3 857 aa26.81■■□□□ 1.88
TMEM54-205ENST00000475208 CLIC4Q9Y696 253 aa26.81■■□□□ 1.88
TMEM54-205ENST00000475208 TPRP12270 2363 aaKnown RBP26.81■■□□□ 1.88
TMEM54-205ENST00000475208 VPS37CA5D8V6 355 aaPredicted RBP26.8■■□□□ 1.88
TMEM54-205ENST00000475208 OTOL1A6NHN0 477 aaPredicted RBP26.8■■□□□ 1.88
TMEM54-205ENST00000475208 MYMKA6NI61 221 aa26.8■■□□□ 1.88
TMEM54-205ENST00000475208 ITGB3P05106 788 aa26.8■■□□□ 1.88
TMEM54-205ENST00000475208 CSH1P0DML2 217 aa26.8■■□□□ 1.88
TMEM54-205ENST00000475208 CSH2P0DML3 217 aa26.8■■□□□ 1.88
TMEM54-205ENST00000475208 GRSF1Q12849 480 aaKnown RBP eCLIP26.8■■□□□ 1.88
TMEM54-205ENST00000475208 L1TD1Q5T7N2 865 aaKnown RBP26.8■■□□□ 1.88
TMEM54-205ENST00000475208 SDHAF4Q5VUM1 108 aa26.8■■□□□ 1.88
TMEM54-205ENST00000475208 C1orf127Q8N9H9 656 aa26.8■■□□□ 1.88
TMEM54-205ENST00000475208 ZSWIM2Q8NEG5 633 aa26.8■■□□□ 1.88
TMEM54-205ENST00000475208 RIN3Q8TB24 985 aa26.8■■□□□ 1.88
TMEM54-205ENST00000475208 LEO1Q8WVC0 666 aaPredicted RBP26.8■■□□□ 1.88
TMEM54-205ENST00000475208 CHFRQ96EP1 664 aa26.8■■□□□ 1.88
TMEM54-205ENST00000475208 ACCSQ96QU6 501 aa26.8■■□□□ 1.88
TMEM54-205ENST00000475208 UPF2Q9HAU5 1272 aaKnown RBP26.8■■□□□ 1.88
TMEM54-205ENST00000475208 OBSL1O75147 1896 aa26.8■■□□□ 1.88
TMEM54-205ENST00000475208 RALGAPA1Q6GYQ0 2036 aa26.8■■□□□ 1.88
TMEM54-205ENST00000475208 GDF9O60383 454 aa26.79■■□□□ 1.88
TMEM54-205ENST00000475208 ADRB1P08588 477 aa26.79■■□□□ 1.88
TMEM54-205ENST00000475208 ARSAP15289 507 aa26.79■■□□□ 1.88
TMEM54-205ENST00000475208 GAP43P17677 238 aa26.79■■□□□ 1.88
TMEM54-205ENST00000475208 PXNP49023 591 aaPredicted RBP26.79■■□□□ 1.88
TMEM54-205ENST00000475208 PPM1JQ5JR12 505 aa26.79■■□□□ 1.88
TMEM54-205ENST00000475208 MON1AQ86VX9 555 aa26.79■■□□□ 1.88
TMEM54-205ENST00000475208 DDX43Q9NXZ2 648 aaKnown RBP26.79■■□□□ 1.88
TMEM54-205ENST00000475208 FBXO2Q9UK22 296 aaPredicted RBP26.79■■□□□ 1.88
TMEM54-205ENST00000475208 EPG5Q9HCE0 2579 aa26.79■■□□□ 1.88
TMEM54-205ENST00000475208 TRDMT1O14717 391 aaKnown RBP26.78■■□□□ 1.88
TMEM54-205ENST00000475208 FOXD2O60548 495 aaPredicted RBP26.78■■□□□ 1.88
TMEM54-205ENST00000475208 HUS1O60921 280 aa26.78■■□□□ 1.88
TMEM54-205ENST00000475208 GCNT3O95395 438 aa26.78■■□□□ 1.88
TMEM54-205ENST00000475208 ACAT1P24752 427 aaKnown RBP26.78■■□□□ 1.88
TMEM54-205ENST00000475208 DDR2Q16832 855 aa26.78■■□□□ 1.88
TMEM54-205ENST00000475208 RRAGBQ5VZM2 374 aa26.78■■□□□ 1.88
TMEM54-205ENST00000475208 CC2D1AQ6P1N0 951 aaPredicted RBP26.78■■□□□ 1.88
TMEM54-205ENST00000475208 GAB3Q8WWW8 586 aa26.78■■□□□ 1.88
TMEM54-205ENST00000475208 DNAJC19Q96DA6 116 aa26.78■■□□□ 1.88
TMEM54-205ENST00000475208 ACBD6Q9BR61 282 aa26.78■■□□□ 1.88
TMEM54-205ENST00000475208 RBAKQ9NYW8 714 aaPredicted RBP26.78■■□□□ 1.88
TMEM54-205ENST00000475208 ZNF638Q14966 1978 aaKnown RBP26.78■■□□□ 1.88
TMEM54-205ENST00000475208 ACACBO00763 2458 aa26.77■■□□□ 1.88
TMEM54-205ENST00000475208 SOBPA7XYQ1 873 aa26.77■■□□□ 1.88
TMEM54-205ENST00000475208 TADA3O75528 432 aa26.77■■□□□ 1.88
TMEM54-205ENST00000475208 CYP2F1P24903 491 aa26.77■■□□□ 1.88
TMEM54-205ENST00000475208 CASP5P51878 434 aa26.77■■□□□ 1.88
TMEM54-205ENST00000475208 RPL10AP62906 217 aaKnown RBP26.77■■□□□ 1.88
TMEM54-205ENST00000475208 MYL7Q01449 175 aa26.77■■□□□ 1.88
TMEM54-205ENST00000475208 INTS6LQ5JSJ4 861 aaKnown RBP26.77■■□□□ 1.88
TMEM54-205ENST00000475208 SV2BQ7L1I2 683 aa26.77■■□□□ 1.88
TMEM54-205ENST00000475208 LRRC52Q8N7C0 313 aa26.77■■□□□ 1.88
TMEM54-205ENST00000475208 CACTINQ8WUQ7 758 aaKnown RBP26.77■■□□□ 1.88
TMEM54-205ENST00000475208 FAM84AQ96KN4 292 aa26.77■■□□□ 1.88
TMEM54-205ENST00000475208 ABCB6Q9NP58 842 aa26.77■■□□□ 1.88
TMEM54-205ENST00000475208 UXTQ9UBK9 157 aaPredicted RBP26.77■■□□□ 1.88
TMEM54-205ENST00000475208 SLC8A2Q9UPR5 921 aa26.77■■□□□ 1.88
TMEM54-205ENST00000475208 CACNA1BQ00975 2339 aa26.77■■□□□ 1.88
TMEM54-205ENST00000475208 AXIN1O15169 862 aa26.76■■□□□ 1.87
TMEM54-205ENST00000475208 ATG13O75143 517 aa26.76■■□□□ 1.87
TMEM54-205ENST00000475208 RNF40O75150 1001 aa26.76■■□□□ 1.87
TMEM54-205ENST00000475208 RPP40O75818 363 aaKnown RBP26.76■■□□□ 1.87
TMEM54-205ENST00000475208 LDHAP00338 332 aaKnown RBP26.76■■□□□ 1.87
TMEM54-205ENST00000475208 EGFP01133 1207 aa26.76■■□□□ 1.87
TMEM54-205ENST00000475208 GARTP22102 1010 aa26.76■■□□□ 1.87
TMEM54-205ENST00000475208 TXLNAP40222 546 aa26.76■■□□□ 1.87
TMEM54-205ENST00000475208 AMPD2Q01433 879 aa26.76■■□□□ 1.87
TMEM54-205ENST00000475208 ZNF268Q14587 947 aaPredicted RBP26.76■■□□□ 1.87
TMEM54-205ENST00000475208 PDGFRLQ15198 375 aa26.76■■□□□ 1.87
TMEM54-205ENST00000475208 SCARA3Q6AZY7 606 aa26.76■■□□□ 1.87
TMEM54-205ENST00000475208 SYCP3Q8IZU3 236 aa26.76■■□□□ 1.87
TMEM54-205ENST00000475208 TMEM86AQ8N2M4 240 aa26.76■■□□□ 1.87
TMEM54-205ENST00000475208 CLIC6Q96NY7 704 aa26.76■■□□□ 1.87
TMEM54-205ENST00000475208 PKMYT1Q99640 499 aa26.76■■□□□ 1.87
TMEM54-205ENST00000475208 ITGA11Q9UKX5 1188 aa26.76■■□□□ 1.87
TMEM54-205ENST00000475208 SRPRBQ9Y5M8 271 aaKnown RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms