RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 NELFBQ8WX92 580 aa12.74□□□□□ -0.37
CLIP2-204ENST00000474962 SMARCD2Q92925 531 aa12.74□□□□□ -0.37
CLIP2-204ENST00000474962 NKD2Q969F2 451 aaPredicted RBP12.74□□□□□ -0.37
CLIP2-204ENST00000474962 TRMT61BQ9BVS5 477 aaKnown RBP12.74□□□□□ -0.37
CLIP2-204ENST00000474962 KCTD10Q9H3F6 313 aa12.74□□□□□ -0.37
CLIP2-204ENST00000474962 ASAH2Q9NR71 780 aa12.74□□□□□ -0.37
CLIP2-204ENST00000474962 ANO10Q9NW15 660 aa12.74□□□□□ -0.37
CLIP2-204ENST00000474962 TRAF3IP3Q9Y228 551 aa12.74□□□□□ -0.37
CLIP2-204ENST00000474962 R4GN57 208 aa12.74□□□□□ -0.37
CLIP2-204ENST00000474962 SCN1AP35498 2009 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 A0A1W2PRU2 124 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 CETN3O15182 167 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 IL18RAPO95256 599 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 FGFR1OPO95684 399 aaKnown RBP12.73□□□□□ -0.37
CLIP2-204ENST00000474962 CYP11A1P05108 521 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 SP9P0CG40 484 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 NR2F2P24468 414 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 TFAMQ00059 246 aaKnown RBP12.73□□□□□ -0.37
CLIP2-204ENST00000474962 POU5F1Q01860 360 aaKnown RBP12.73□□□□□ -0.37
CLIP2-204ENST00000474962 PAK1Q13153 545 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 FZD5Q13467 585 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 SURF1Q15526 300 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 EDRF1Q3B7T1 1238 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 SLC39A12Q504Y0 691 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 STXBP5Q5T5C0 1151 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 CEP135Q66GS9 1140 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 VITQ6UXI7 678 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 TPRG1Q6ZUI0 275 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 GAREM2Q75VX8 874 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 TMC8Q8IU68 726 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 C12orf56Q8IXR9 622 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 ZSCAN18Q8TBC5 510 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-204ENST00000474962 RSPRY1Q96DX4 576 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 ZNF334Q9HCZ1 680 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-204ENST00000474962 RBAKQ9NYW8 714 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-204ENST00000474962 CTNND2Q9UQB3 1225 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 F5P12259 2224 aa12.73□□□□□ -0.37
CLIP2-204ENST00000474962 KPNA7A9QM74 516 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 PPP1R3GB7ZBB8 358 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 PSMC3P17980 439 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 BMP6P22004 513 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 PAX3P23760 479 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 GDI1P31150 447 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 TAF6P49848 677 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 STX17P56962 302 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 FKBP3Q00688 224 aaKnown RBP12.72□□□□□ -0.37
CLIP2-204ENST00000474962 SNRNP35Q16560 246 aaKnown RBP12.72□□□□□ -0.37
CLIP2-204ENST00000474962 STX1AQ16623 288 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 CT47A1Q5JQC4 288 aaPredicted RBP12.72□□□□□ -0.37
CLIP2-204ENST00000474962 ZNF852Q6ZMS4 543 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 RBM43Q6ZSC3 357 aaKnown RBP12.72□□□□□ -0.37
CLIP2-204ENST00000474962 METTL23Q86XA0 190 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 SLC9A9Q8IVB4 645 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 LEMD2Q8NC56 503 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 CACTINQ8WUQ7 758 aaKnown RBP12.72□□□□□ -0.37
CLIP2-204ENST00000474962 LRRC3BQ96PB8 259 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 FNBP1Q96RU3 617 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 LPIN3Q9BQK8 851 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 BCO2Q9BYV7 579 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 NAT10Q9H0A0 1025 aaKnown RBP12.72□□□□□ -0.37
CLIP2-204ENST00000474962 ZCWPW1Q9H0M4 648 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 SLITRK6Q9H5Y7 841 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 BRD9Q9H8M2 597 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 TRPV4Q9HBA0 871 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 LTB4R2Q9NPC1 389 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 SPATA6Q9NWH7 488 aaPredicted RBP12.72□□□□□ -0.37
CLIP2-204ENST00000474962 DSEQ9UL01 958 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 AGAP1Q9UPQ3 857 aa12.72□□□□□ -0.37
CLIP2-204ENST00000474962 R3HCC1Q9Y3T6 440 aaKnown RBP12.72□□□□□ -0.37
CLIP2-204ENST00000474962 NCANO14594 1321 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 HEPACAM2A8MVW5 462 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 CCDC192P0DO97 292 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 KRT13P13646 458 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 CD44P16070 742 aaKnown RBP12.71□□□□□ -0.37
CLIP2-204ENST00000474962 TARSP26639 723 aaKnown RBP12.71□□□□□ -0.37
CLIP2-204ENST00000474962 PSMC2P35998 433 aaKnown RBP12.71□□□□□ -0.37
CLIP2-204ENST00000474962 PLD1Q13393 1074 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 NFIL3Q16649 462 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 MGAT5BQ3V5L5 792 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 ANKRD40Q6AI12 368 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 ARID3BQ8IVW6 561 aaPredicted RBP12.71□□□□□ -0.37
CLIP2-204ENST00000474962 MFSD6LQ8IWD5 586 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 THEM5Q8N1Q8 247 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 CSGALNACT2Q8N6G5 542 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 C1orf127Q8N9H9 656 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 CXorf38Q8TB03 319 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 GIPC2Q8TF65 315 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 PSMG2Q969U7 264 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 CLDN23Q96B33 292 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 NELL2Q99435 816 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 SEPT5Q99719 369 aaPredicted RBP12.71□□□□□ -0.37
CLIP2-204ENST00000474962 MKNK1Q9BUB5 465 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 OSBPL6Q9BZF3 934 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 ATXN3LQ9H3M9 355 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 PDE11AQ9HCR9 933 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 TMLHEQ9NVH6 421 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 RWDD2AQ9UIY3 292 aa12.71□□□□□ -0.37
CLIP2-204ENST00000474962 GVINP1Q7Z2Y8 2422 aa12.71□□□□□ -0.38
CLIP2-204ENST00000474962 ANK1P16157 1881 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 SYCE3A1L190 88 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms