RNA–Protein interactions for RNA: ENST00000474707.1

RABGAP1-208, Transcript of RAB GTPase activating protein 1, human

TSL 3

Gene RABGAP1, Length 670 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RABGAP1-208	ENST00000474707	NANOS2	P60321	138 aa	Known RBP	4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	TCF15	Q12870	199 aa		4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	HABP2	Q14520	560 aa	Predicted RBP	4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	CCDC93	Q567U6	631 aa		4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	TRIM72	Q6ZMU5	477 aa		4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	AFAP1L2	Q8N4X5	818 aa		4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	HDAC10	Q969S8	669 aa		4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	CNPPD1	Q9BV87	410 aa		4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	FSD1L	Q9BXM9	530 aa		4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	VPS33B	Q9H267	617 aa		4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	RLIM	Q9NVW2	624 aa		4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	SH2B3	Q9UQQ2	575 aa		4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	F2RL2	O00254	374 aa		4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	SLC16A3	O15427	465 aa	Known RBP	4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	ALPL	P05186	524 aa		4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	ENG	P17813	658 aa		4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	ATP5F1	P24539	256 aa	Predicted RBP	4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	CLCN2	P51788	898 aa		4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	ZNF135	P52742	658 aa	Predicted RBP	4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	PSMC1	P62191	440 aa	Known RBP	4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	KRT78	Q8N1N4	520 aa		4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	ACRBP	Q8NEB7	543 aa		4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	CLPTM1L	Q96KA5	538 aa		4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	PPP1R10	Q96QC0	940 aa	Known RBP	4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	BRD9	Q9H8M2	597 aa		4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	GPR35	Q9HC97	309 aa		4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	SIDT1	Q9NXL6	827 aa	Known RBP	4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	TUBD1	Q9UJT1	453 aa		4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	ZNF112	Q9UJU3	913 aa		4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	ADAMTS5	Q9UNA0	930 aa		4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	SCAF8	Q9UPN6	1271 aa	Known RBP	4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707	IPP	Q9Y573	584 aa		4.19	□□□□□ -1.74
RABGAP1-208	ENST00000474707		H7C1Q1	480 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	FCHO1	O14526	889 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	TLR5	O60602	858 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	TMEM191B	P0C7N4	346 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	SCP2	P22307	547 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	IL10RA	Q13651	578 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	GTF2H3	Q13889	308 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	ERV3-1	Q14264	604 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	RBMS2	Q15434	407 aa	Known RBP	4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	TRIM71	Q2Q1W2	868 aa	Known RBP	4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	TREML2	Q5T2D2	321 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	FCRL6	Q6DN72	434 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	LHFPL2	Q6ZUX7	228 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	PPP1R32	Q7Z5V6	425 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	UBXN4	Q92575	508 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	LYZL4	Q96KX0	146 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	FAM118B	Q9BPY3	351 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	CAAP1	Q9H8G2	361 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	AGAP1	Q9UPQ3	857 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	RAD54B	Q9Y620	910 aa		4.18	□□□□□ -1.74
RABGAP1-208	ENST00000474707	PRSS29P	A6NIE9	313 aa		4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	TRIM75P	A6NK02	468 aa		4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	KRTAP9-6	A8MVA2	160 aa		4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	NT5C1B-RDH14	C9J2C7	533 aa		4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707		K7ESF4	209 aa		4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	ENPP3	O14638	875 aa		4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	VPS4B	O75351	444 aa		4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	EYA4	O95677	639 aa		4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	GJB1	P08034	283 aa		4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	CYP2A6	P11509	494 aa	Predicted RBP	4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	PRF1	P14222	555 aa		4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	IL1R2	P27930	398 aa		4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	CYP2C19	P33261	490 aa		4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	SOX5	P35711	763 aa		4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	GCLC	P48506	637 aa	Predicted RBP	4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	GYS2	P54840	703 aa		4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	LEXM	Q3ZCV2	418 aa		4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	C9orf47	Q6ZRZ4	202 aa		4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	WASHC2A	Q641Q2	1341 aa		4.17	□□□□□ -1.74
RABGAP1-208	ENST00000474707	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	CD8B2	A6NJW9	211 aa		4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	POC1B-GALNT4	F8VUJ3	575 aa		4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	HTRA2	O43464	458 aa	Predicted RBP	4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	NDUFS2	O75306	463 aa		4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	USP1	O94782	785 aa		4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	KIF20A	O95235	890 aa		4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	NPS	P0C0P6	89 aa		4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	MAL	P21145	153 aa		4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	EDNRB	P24530	442 aa		4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	HTR6	P50406	440 aa		4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	KRTAP10-5	P60370	271 aa		4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	C3orf36	Q3SXR2	165 aa		4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	CERKL	Q49MI3	558 aa	Predicted RBP	4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	C10orf25	Q5T742	122 aa		4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	MEX3C	Q5U5Q3	659 aa	Known RBP	4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	KIRREL2	Q6UWL6	708 aa		4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	GALNT4	Q8N4A0	578 aa		4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	RP9	Q8TA86	221 aa	Known RBP	4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	DAZAP1	Q96EP5	407 aa	Known RBP	4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	CFAP97	Q9P2B7	532 aa		4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	LIMCH1	Q9UPQ0	1083 aa		4.16	□□□□□ -1.74
RABGAP1-208	ENST00000474707	FAM90A8P	A6NJQ4	464 aa		4.15	□□□□□ -1.75
RABGAP1-208	ENST00000474707	ADAM10	O14672	748 aa		4.15	□□□□□ -1.75
RABGAP1-208	ENST00000474707	GPR39	O43194	453 aa		4.15	□□□□□ -1.75
RABGAP1-208	ENST00000474707	ABLIM3	O94929	683 aa		4.15	□□□□□ -1.75

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