RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 UPP1Q16831 310 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 EDRF1Q3B7T1 1238 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 USP41Q3LFD5 358 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 IQCEQ6IPM2 695 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 CCDC70Q6NSX1 233 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 ELMSAN1Q6PJG2 1045 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 FOXR2Q6PJQ5 311 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 CRELD2Q6UXH1 353 aaPredicted RBP4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 TMC7Q7Z402 723 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 SPRED2Q7Z698 418 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 DNAAF5Q86Y56 855 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 VPS52Q8N1B4 723 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 RNF10Q8N5U6 811 aaKnown RBP4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 FAM71BQ8TC56 605 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 MICAL1Q8TDZ2 1067 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 PPM1EQ8WY54 764 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 SYN2Q92777 582 aaPredicted RBP4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 SAAL1Q96ER3 474 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 ANKRD36BP1Q96IX9 119 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 FBXL18Q96ME1 805 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 TCF25Q9BQ70 676 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 CBWD1Q9BRT8 395 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 SELENOOQ9BVL4 669 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 EMILIN2Q9BXX0 1053 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 OXCT2Q9BYC2 517 aaPredicted RBP4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 ZBP1Q9H171 429 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 NUCKS1Q9H1E3 243 aaKnown RBP4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 PCIF1Q9H4Z3 704 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 RABEP2Q9H5N1 569 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 FAM204AQ9H8W3 233 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 VIPAS39Q9H9C1 493 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 MARCH5Q9NX47 278 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 HCSTQ9UBK5 93 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 DPP7Q9UHL4 492 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 HPCAL4Q9UM19 191 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 PACSIN2Q9UNF0 486 aaPredicted RBP4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 TRAF3IP3Q9Y228 551 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 FRMD4BQ9Y2L6 1034 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 PRG3Q9Y2Y8 225 aaPredicted RBP4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 HYOU1Q9Y4L1 999 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 IRAK3Q9Y616 596 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 TISP43B9A030 160 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 NT5C1B-RDH14C9J2C7 533 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 H7C4K7 107 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 RBAK-RBAKDNI3L0D1 243 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 AGPSO00116 658 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 CLIC2O15247 247 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 EXOC3O60645 756 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 SLC34A2O95436 690 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 CXCL14O95715 111 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 FTCDO95954 541 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 EFEMP2O95967 443 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 TNNC2P02585 160 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 NR3C1P04150 777 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 URODP06132 367 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 DNAJB1P25685 340 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 PNPLA4P41247 253 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 CYP2J2P51589 502 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 MARSP56192 900 aaKnown RBP4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 DSG1Q02413 1049 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 CYP24A1Q07973 514 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 PSMD6Q15008 389 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 ZBTB6Q15916 424 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 SNRNP35Q16560 246 aaKnown RBP4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 SLC18A3Q16572 532 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 SEZ6Q53EL9 994 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 TCEAL5Q5H9L2 206 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 GLRA4Q5JXX5 417 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 ZBTB41Q5SVQ8 909 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 PLPP4Q5VZY2 271 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 JADE1Q6IE81 842 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 FUT10Q6P4F1 479 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 LRRC31Q6UY01 552 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 CCDC91Q7Z6B0 441 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 WDR49Q8IV35 697 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 RNF168Q8IYW5 571 aaPredicted RBP4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 CNPY4Q8N129 248 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 EFHBQ8N7U6 833 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 MFSD14AQ96MC6 490 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 ZNF560Q96MR9 790 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 ZMAT2Q96NC0 199 aaKnown RBP4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 FNBP1Q96RU3 617 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 PACSIN1Q9BY11 444 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 ACBD3Q9H3P7 528 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 MED4Q9NPJ6 270 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 MRPL17Q9NRX2 175 aaKnown RBP4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 RBM12Q9NTZ6 932 aaKnown RBP4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 DMAC2Q9NW81 257 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 AIPL1Q9NZN9 384 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 FNIP2Q9P278 1114 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 ITGA11Q9UKX5 1188 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 SUFUQ9UMX1 484 aa4.45□□□□□ -1.7
GAPVD1-216ENST00000474637 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.44□□□□□ -1.7
GAPVD1-216ENST00000474637 C2orf71A6NGG8 1288 aa4.44□□□□□ -1.7
GAPVD1-216ENST00000474637 SYN3O14994 580 aa4.44□□□□□ -1.7
GAPVD1-216ENST00000474637 SLC16A3O15427 465 aaKnown RBP4.44□□□□□ -1.7
GAPVD1-216ENST00000474637 MEFVO15553 781 aaPredicted RBP4.44□□□□□ -1.7
GAPVD1-216ENST00000474637 B4GALT3O60512 393 aa4.44□□□□□ -1.7
GAPVD1-216ENST00000474637 AKAP3O75969 853 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms