RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 WDR87Q6ZQQ6 2873 aa21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 NCANO14594 1321 aa21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 EP300Q09472 2414 aaPredicted RBP21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 SOBPA7XYQ1 873 aa21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 PRPF40AO75400 957 aaKnown RBP21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 CSH1P0DML2 217 aa21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 CSH2P0DML3 217 aa21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 DDX6P26196 483 aaKnown RBP eCLIP21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 KPNA1P52294 538 aaPredicted RBP21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 RPL10AP62906 217 aaKnown RBP21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 PLCB2Q00722 1185 aa21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 PPP2R5DQ14738 602 aa21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 FOXD4L6Q3SYB3 417 aaPredicted RBP21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 INTS6LQ5JSJ4 861 aaKnown RBP21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 FOXD4L3Q6VB84 417 aaPredicted RBP21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 MAMSTRQ6ZN01 415 aa21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 HS2ST1Q7LGA3 356 aa21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 CBWD2Q8IUF1 395 aa21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 WDR49Q8IV35 697 aa21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 ADGRF2Q8IZF7 708 aa21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 ZNF687Q8N1G0 1237 aa21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 ATRIPQ8WXE1 791 aa21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 CHRDQ9H2X0 955 aa21.86■■□□□ 1.09
PDLIM4-206ENST00000474421 ZNF638Q14966 1978 aaKnown RBP21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 PVALEFA0A1B0GWK0 134 aa21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 HOXD13P35453 343 aa21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 CDR1P51861 262 aa21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 CYP4F8P98187 520 aa21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 RESP18Q5W5W9 173 aa21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 BPIFB1Q8TDL5 484 aa21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 HPDLQ96IR7 371 aa21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 PI4K2AQ9BTU6 479 aa21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 FAM126AQ9BYI3 521 aaPredicted RBP21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 PRMT8Q9NR22 394 aaPredicted RBP21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 AGPAT3Q9NRZ7 376 aa21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 TMLHEQ9NVH6 421 aa21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 THG1LQ9NWX6 298 aaKnown RBP21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 ZSCAN32Q9NX65 697 aa21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 CGNQ9P2M7 1197 aaKnown RBP21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 UXTQ9UBK9 157 aaPredicted RBP21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 PCDHA7Q9UN72 937 aa21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 SPTBN4Q9H254 2564 aa21.85■■□□□ 1.09
PDLIM4-206ENST00000474421 GABRDO14764 452 aa21.84■■□□□ 1.09
PDLIM4-206ENST00000474421 CCNE1P24864 410 aa21.84■■□□□ 1.09
PDLIM4-206ENST00000474421 EHHADHQ08426 723 aa21.84■■□□□ 1.09
PDLIM4-206ENST00000474421 MTAPQ13126 283 aa21.84■■□□□ 1.09
PDLIM4-206ENST00000474421 SNRNP35Q16560 246 aaKnown RBP21.84■■□□□ 1.09
PDLIM4-206ENST00000474421 LMBRD2Q68DH5 695 aaPredicted RBP21.84■■□□□ 1.09
PDLIM4-206ENST00000474421 CELF5Q8N6W0 485 aaKnown RBP21.84■■□□□ 1.09
PDLIM4-206ENST00000474421 OR5B17Q8NGF7 314 aa21.84■■□□□ 1.09
PDLIM4-206ENST00000474421 FUBP3Q96I24 572 aaKnown RBP eCLIP21.84■■□□□ 1.09
PDLIM4-206ENST00000474421 FNBP1Q96RU3 617 aa21.84■■□□□ 1.09
PDLIM4-206ENST00000474421 LMAN1LQ9HAT1 526 aa21.84■■□□□ 1.09
PDLIM4-206ENST00000474421 ZNF292O60281 2723 aa21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 TGFB1I1O43294 461 aa21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 HMGA1P17096 107 aaKnown RBP21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 ACAT1P24752 427 aaKnown RBP21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 AVPR1AP37288 418 aa21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 NLRP12P59046 1061 aa21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 LRRC32Q14392 662 aa21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 SOWAHAQ2M3V2 549 aa21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 CFAP221Q4G0U5 840 aa21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 RALGPS2Q86X27 583 aaPredicted RBP21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 SPATA2LQ8IUW3 424 aaPredicted RBP21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 GPIHBP1Q8IV16 184 aa21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 CEP57L1Q8IYX8 460 aa21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 CMTM8Q8IZV2 173 aa21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 XXYLT1Q8NBI6 393 aa21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 SCFD1Q8WVM8 642 aa21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 MRPS31Q92665 395 aaKnown RBP21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 FAM84AQ96KN4 292 aa21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 PKMYT1Q99640 499 aa21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 SLC46A2Q9BY10 475 aa21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 GTF3C4Q9UKN8 822 aa21.83■■□□□ 1.09
PDLIM4-206ENST00000474421 PTPRJQ12913 1337 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 SLC38A8A6NNN8 435 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 PRAMEF12O95522 483 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 F11P03951 625 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 CYP2F1P24903 491 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 CCR3P51677 355 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 NRLP54845 237 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 MAPRE1Q15691 268 aaKnown RBP21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 BMT2Q1RMZ1 405 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 C4orf50Q6ZRC1 276 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 LIMS2Q7Z4I7 341 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 OSTM1Q86WC4 334 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 ZBTB44Q8NCP5 570 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 RUBCNQ92622 972 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 NELL1Q92832 810 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 TRMT2BQ96GJ1 504 aaKnown RBP21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 LRRC3BQ96PB8 259 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 KIF9Q9HAQ2 790 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 RCOR1Q9UKL0 485 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 CDH9Q9ULB4 789 aa21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 MAGED2Q9UNF1 606 aaPredicted RBP21.82■■□□□ 1.08
PDLIM4-206ENST00000474421 OTOGLQ3ZCN5 2332 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 MYBPHLA2RUH7 354 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 SPECC1L-ADORA2AF8WAN1 911 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 NOL4O94818 638 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 DLATP10515 647 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms