RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 INTS6LQ5JSJ4 861 aaKnown RBP16.96■□□□□ 0.31
CDPF1-205ENST00000474256 TMEM150AQ86TG1 271 aa16.96■□□□□ 0.31
CDPF1-205ENST00000474256 ADGRF2Q8IZF7 708 aa16.96■□□□□ 0.31
CDPF1-205ENST00000474256 HPDLQ96IR7 371 aa16.96■□□□□ 0.31
CDPF1-205ENST00000474256 PI4K2AQ9BTU6 479 aa16.96■□□□□ 0.31
CDPF1-205ENST00000474256 ABCB6Q9NP58 842 aa16.96■□□□□ 0.31
CDPF1-205ENST00000474256 PIAS3Q9Y6X2 628 aa16.96■□□□□ 0.31
CDPF1-205ENST00000474256 LAMTOR5O43504 91 aa16.95■□□□□ 0.3
CDPF1-205ENST00000474256 PRPF40AO75400 957 aaKnown RBP16.95■□□□□ 0.3
CDPF1-205ENST00000474256 F11P03951 625 aa16.95■□□□□ 0.3
CDPF1-205ENST00000474256 SLFN14P0C7P3 912 aa16.95■□□□□ 0.3
CDPF1-205ENST00000474256 TAF12Q16514 161 aa16.95■□□□□ 0.3
CDPF1-205ENST00000474256 ZC3H14Q6PJT7 736 aaKnown RBP16.95■□□□□ 0.3
CDPF1-205ENST00000474256 GPIHBP1Q8IV16 184 aa16.95■□□□□ 0.3
CDPF1-205ENST00000474256 NELFCDQ8IXH7 590 aa16.95■□□□□ 0.3
CDPF1-205ENST00000474256 C12orf56Q8IXR9 622 aa16.95■□□□□ 0.3
CDPF1-205ENST00000474256 YAF2Q8IY57 180 aa16.95■□□□□ 0.3
CDPF1-205ENST00000474256 RDH13Q8NBN7 331 aa16.95■□□□□ 0.3
CDPF1-205ENST00000474256 FAM3CQ92520 227 aa16.95■□□□□ 0.3
CDPF1-205ENST00000474256 GCNAQ96QF7 691 aa16.95■□□□□ 0.3
CDPF1-205ENST00000474256 SLC46A2Q9BY10 475 aa16.95■□□□□ 0.3
CDPF1-205ENST00000474256 SLC39A2Q9NP94 309 aa16.95■□□□□ 0.3
CDPF1-205ENST00000474256 CGNQ9P2M7 1197 aaKnown RBP16.95■□□□□ 0.3
CDPF1-205ENST00000474256 ZMYM5Q9UJ78 669 aa16.95■□□□□ 0.3
CDPF1-205ENST00000474256 GTF3C4Q9UKN8 822 aa16.95■□□□□ 0.3
CDPF1-205ENST00000474256 R3HCC1Q9Y3T6 440 aaKnown RBP16.95■□□□□ 0.3
CDPF1-205ENST00000474256 DPYSL4O14531 572 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 CLIC2O15247 247 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 HCRTO43612 131 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 PRAMEF12O95522 483 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 LMNAP02545 664 aaKnown RBP16.94■□□□□ 0.3
CDPF1-205ENST00000474256 CSH1P0DML2 217 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 CSH2P0DML3 217 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 CYP2F1P24903 491 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 PCSK1P29120 753 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 GPR15P49685 360 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 NLRP12P59046 1061 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 PSMD6Q15008 389 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 KNOP1Q1ED39 458 aaKnown RBP16.94■□□□□ 0.3
CDPF1-205ENST00000474256 CFAP221Q4G0U5 840 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 FAM171BQ6P995 826 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 MAMSTRQ6ZN01 415 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 HS2ST1Q7LGA3 356 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 TRAPPC11Q7Z392 1133 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 GRAMD1CQ8IYS0 662 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 ADSSL1Q8N142 457 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 XXYLT1Q8NBI6 393 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 KBTBD7Q8WVZ9 684 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 MSANTD3Q96H12 275 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 SERTAD1Q9UHV2 236 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 NDRG2Q9UN36 371 aaKnown RBP16.94■□□□□ 0.3
CDPF1-205ENST00000474256 ZDHHC9Q9Y397 364 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 VPS13AQ96RL7 3174 aa16.94■□□□□ 0.3
CDPF1-205ENST00000474256 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.93■□□□□ 0.3
CDPF1-205ENST00000474256 MYBPHLA2RUH7 354 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 SOBPA7XYQ1 873 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 ACTN4O43707 911 aaKnown RBP16.93■□□□□ 0.3
CDPF1-205ENST00000474256 KLRC4O43908 158 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 CST3P01034 146 aaPredicted RBP16.93■□□□□ 0.3
CDPF1-205ENST00000474256 DLATP10515 647 aaKnown RBP16.93■□□□□ 0.3
CDPF1-205ENST00000474256 CCNE1P24864 410 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 CYP2J2P51589 502 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 RPL10AP62906 217 aaKnown RBP16.93■□□□□ 0.3
CDPF1-205ENST00000474256 CYP24A1Q07973 514 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 DDR2Q16832 855 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 CCDC142Q17RM4 750 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 ARHGAP29Q52LW3 1261 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 SDHAF4Q5VUM1 108 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 C1orf228Q6PIY5 440 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 CEP57L1Q8IYX8 460 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 CMTM8Q8IZV2 173 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 BPIFB1Q8TDL5 484 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 CSGALNACT1Q8TDX6 532 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 NELL1Q92832 810 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 PAGE5Q96GU1 130 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 FUBP3Q96I24 572 aaKnown RBP eCLIP16.93■□□□□ 0.3
CDPF1-205ENST00000474256 FNBP1Q96RU3 617 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 CGRRF1Q99675 332 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 GZF1Q9H116 711 aaPredicted RBP16.93■□□□□ 0.3
CDPF1-205ENST00000474256 CHRDQ9H2X0 955 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 C8orf33Q9H7E9 229 aaPredicted RBP16.93■□□□□ 0.3
CDPF1-205ENST00000474256 PRMT8Q9NR22 394 aaPredicted RBP16.93■□□□□ 0.3
CDPF1-205ENST00000474256 RIF1Q5UIP0 2472 aaKnown RBP16.93■□□□□ 0.3
CDPF1-205ENST00000474256 COL4A2P08572 1712 aa16.93■□□□□ 0.3
CDPF1-205ENST00000474256 NOL4O94818 638 aa16.92■□□□□ 0.3
CDPF1-205ENST00000474256 CHRNB1P11230 501 aa16.92■□□□□ 0.3
CDPF1-205ENST00000474256 TNNI1P19237 187 aa16.92■□□□□ 0.3
CDPF1-205ENST00000474256 CMA1P23946 247 aa16.92■□□□□ 0.3
CDPF1-205ENST00000474256 LMO2P25791 158 aa16.92■□□□□ 0.3
CDPF1-205ENST00000474256 DDX6P26196 483 aaKnown RBP eCLIP16.92■□□□□ 0.3
CDPF1-205ENST00000474256 PLCB2Q00722 1185 aa16.92■□□□□ 0.3
CDPF1-205ENST00000474256 CSTF1Q05048 431 aaKnown RBP16.92■□□□□ 0.3
CDPF1-205ENST00000474256 MTAPQ13126 283 aa16.92■□□□□ 0.3
CDPF1-205ENST00000474256 SPATA2LQ8IUW3 424 aaPredicted RBP16.92■□□□□ 0.3
CDPF1-205ENST00000474256 CELF5Q8N6W0 485 aaKnown RBP16.92■□□□□ 0.3
CDPF1-205ENST00000474256 CCDC127Q96BQ5 260 aa16.92■□□□□ 0.3
CDPF1-205ENST00000474256 TRMT2BQ96GJ1 504 aaKnown RBP16.92■□□□□ 0.3
CDPF1-205ENST00000474256 ZFYVE19Q96K21 471 aa16.92■□□□□ 0.3
CDPF1-205ENST00000474256 MYRFLQ96LU7 910 aa16.92■□□□□ 0.3
CDPF1-205ENST00000474256 SYT15Q9BQS2 421 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms