RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ATP2C2O75185 946 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 STAU1O95793 577 aaKnown RBP11.98□□□□□ -0.49
CKS1B-206ENST00000474215 RFX1P22670 979 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 WARSP23381 471 aaKnown RBP11.98□□□□□ -0.49
CKS1B-206ENST00000474215 CYP2F1P24903 491 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 LMO2P25791 158 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 GABRR2P28476 465 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 ATICP31939 592 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 VIPR2P41587 438 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 STARD6P59095 220 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 MYL6P60660 151 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 RPL10AP62906 217 aaKnown RBP11.98□□□□□ -0.49
CKS1B-206ENST00000474215 TCF15Q12870 199 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 SNW1Q13573 536 aaKnown RBP11.98□□□□□ -0.49
CKS1B-206ENST00000474215 FAM171BQ6P995 826 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 SPATA2LQ8IUW3 424 aaPredicted RBP11.98□□□□□ -0.49
CKS1B-206ENST00000474215 GUF1Q8N442 669 aaKnown RBP11.98□□□□□ -0.49
CKS1B-206ENST00000474215 ENGASEQ8NFI3 743 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 TMC2Q8TDI7 906 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 SYAP1Q96A49 352 aaPredicted RBP11.98□□□□□ -0.49
CKS1B-206ENST00000474215 E2F7Q96AV8 911 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 TRMT61BQ9BVS5 477 aaKnown RBP11.98□□□□□ -0.49
CKS1B-206ENST00000474215 IRF2BPLQ9H1B7 796 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 ATXN3LQ9H3M9 355 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 TBC1D17Q9HA65 648 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 CDH9Q9ULB4 789 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 FRMD4BQ9Y2L6 1034 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 TSC2P49815 1807 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 ZDBF2Q9HCK1 2354 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 IKBKBO14920 756 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 TACC1O75410 805 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 C4BPAP04003 597 aaKnown RBP11.97□□□□□ -0.49
CKS1B-206ENST00000474215 PDGFRBP09619 1106 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 PSMC3P17980 439 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 RPL13P26373 211 aaKnown RBP11.97□□□□□ -0.49
CKS1B-206ENST00000474215 CDC25CP30307 473 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 GNL1P36915 607 aaPredicted RBP11.97□□□□□ -0.49
CKS1B-206ENST00000474215 TNNC1P63316 161 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 DLG4P78352 724 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 PRKCQQ04759 706 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 FAM160A1Q05DH4 1040 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 BIRC3Q13489 604 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 PNOCQ13519 176 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 MAPRE1Q15691 268 aaKnown RBP11.97□□□□□ -0.49
CKS1B-206ENST00000474215 MLF2Q15773 248 aaPredicted RBP11.97□□□□□ -0.49
CKS1B-206ENST00000474215 NFIL3Q16649 462 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 DDR2Q16832 855 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 CFAP221Q4G0U5 840 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 ARHGAP15Q53QZ3 475 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 STXBP5Q5T5C0 1151 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 TDRD10Q5VZ19 366 aaKnown RBP11.97□□□□□ -0.49
CKS1B-206ENST00000474215 CEP135Q66GS9 1140 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 VITQ6UXI7 678 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 ARID3BQ8IVW6 561 aaPredicted RBP11.97□□□□□ -0.49
CKS1B-206ENST00000474215 MFSD6LQ8IWD5 586 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 FUBP3Q96I24 572 aaKnown RBP eCLIP11.97□□□□□ -0.49
CKS1B-206ENST00000474215 SYT15Q9BQS2 421 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 MRPL45Q9BRJ2 306 aaKnown RBP11.97□□□□□ -0.49
CKS1B-206ENST00000474215 XYLT2Q9H1B5 865 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 SNX25Q9H3E2 840 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 BRD9Q9H8M2 597 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 IL21Q9HBE4 155 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 RMND1Q9NWS8 449 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 NXF1Q9UBU9 619 aaKnown RBP11.97□□□□□ -0.49
CKS1B-206ENST00000474215 SIT1Q9Y3P8 196 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 MUC6Q6W4X9 2439 aa11.97□□□□□ -0.49
CKS1B-206ENST00000474215 KANSL1LA0AUZ9 987 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 HEPACAM2A8MVW5 462 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 H0Y858 1186 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 MAPK13O15264 365 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 CSH1P0DML2 217 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 CSH2P0DML3 217 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 HMGA1P17096 107 aaKnown RBP11.96□□□□□ -0.49
CKS1B-206ENST00000474215 NR2F2P24468 414 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 MAGEA11P43364 429 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 GPR15P49685 360 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 NLRP12P59046 1061 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 PSMC1P62191 440 aaKnown RBP11.96□□□□□ -0.49
CKS1B-206ENST00000474215 NCOA4Q13772 614 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 GRM2Q14416 872 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 CCDC142Q17RM4 750 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 SGSM1Q2NKQ1 1148 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 GPR158Q5T848 1215 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 C4orf50Q6ZRC1 276 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 GPIHBP1Q8IV16 184 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 CCDC105Q8IYK2 499 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 DTWD2Q8NBA8 298 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 OR6B3Q8NGW1 331 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 MYCBPAPQ8TBZ2 947 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 DEPDC1BQ8WUY9 529 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 IRF7Q92985 503 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 TIGD1Q96MW7 591 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 GSDMAQ96QA5 445 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 GCNAQ96QF7 691 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 MKNK1Q9BUB5 465 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 DDX23Q9BUQ8 820 aaKnown RBP11.96□□□□□ -0.49
CKS1B-206ENST00000474215 TASP1Q9H6P5 420 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 VRTNQ9H8Y1 702 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 CRTAC1Q9NQ79 661 aa11.96□□□□□ -0.49
CKS1B-206ENST00000474215 MAGEC2Q9UBF1 373 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms