RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 KRBA1A5PL33 1030 aa19.95■□□□□ 0.78
CCDC171-206ENST00000474193 DPYSL4O14531 572 aa19.95■□□□□ 0.78
CCDC171-206ENST00000474193 PSMA7O14818 248 aa19.95■□□□□ 0.78
CCDC171-206ENST00000474193 HAPLN1P10915 354 aaPredicted RBP19.95■□□□□ 0.78
CCDC171-206ENST00000474193 NPR3P17342 541 aa19.95■□□□□ 0.78
CCDC171-206ENST00000474193 GABRR2P28476 465 aa19.95■□□□□ 0.78
CCDC171-206ENST00000474193 CDC25CP30307 473 aa19.95■□□□□ 0.78
CCDC171-206ENST00000474193 CCR2P41597 374 aa19.95■□□□□ 0.78
CCDC171-206ENST00000474193 PRCPP42785 496 aa19.95■□□□□ 0.78
CCDC171-206ENST00000474193 TNNC1P63316 161 aa19.95■□□□□ 0.78
CCDC171-206ENST00000474193 TEAD2Q15562 447 aa19.95■□□□□ 0.78
CCDC171-206ENST00000474193 MAPRE1Q15691 268 aaKnown RBP19.95■□□□□ 0.78
CCDC171-206ENST00000474193 COBLL1Q53SF7 1204 aa19.95■□□□□ 0.78
CCDC171-206ENST00000474193 LRRTM3Q86VH5 581 aa19.95■□□□□ 0.78
CCDC171-206ENST00000474193 SPATA2LQ8IUW3 424 aaPredicted RBP19.95■□□□□ 0.78
CCDC171-206ENST00000474193 ZSCAN18Q8TBC5 510 aaPredicted RBP19.95■□□□□ 0.78
CCDC171-206ENST00000474193 IRF7Q92985 503 aa19.95■□□□□ 0.78
CCDC171-206ENST00000474193 ASB16Q96NS5 453 aa19.95■□□□□ 0.78
CCDC171-206ENST00000474193 DACH1Q9UI36 760 aa19.95■□□□□ 0.78
CCDC171-206ENST00000474193 FRMD4BQ9Y2L6 1034 aa19.95■□□□□ 0.78
CCDC171-206ENST00000474193 SIT1Q9Y3P8 196 aa19.95■□□□□ 0.78
CCDC171-206ENST00000474193 SOAT2O75908 522 aa19.94■□□□□ 0.78
CCDC171-206ENST00000474193 FAM163BP0C2L3 166 aa19.94■□□□□ 0.78
CCDC171-206ENST00000474193 GJA1P17302 382 aa19.94■□□□□ 0.78
CCDC171-206ENST00000474193 PSMC3P17980 439 aa19.94■□□□□ 0.78
CCDC171-206ENST00000474193 BIRC3Q13489 604 aa19.94■□□□□ 0.78
CCDC171-206ENST00000474193 MLF2Q15773 248 aaPredicted RBP19.94■□□□□ 0.78
CCDC171-206ENST00000474193 INTS6LQ5JSJ4 861 aaKnown RBP19.94■□□□□ 0.78
CCDC171-206ENST00000474193 C4orf50Q6ZRC1 276 aa19.94■□□□□ 0.78
CCDC171-206ENST00000474193 SLC9A9Q8IVB4 645 aa19.94■□□□□ 0.78
CCDC171-206ENST00000474193 SHKBP1Q8TBC3 707 aa19.94■□□□□ 0.78
CCDC171-206ENST00000474193 DEPDC1BQ8WUY9 529 aa19.94■□□□□ 0.78
CCDC171-206ENST00000474193 DHTKD1Q96HY7 919 aaPredicted RBP19.94■□□□□ 0.78
CCDC171-206ENST00000474193 NELL2Q99435 816 aa19.94■□□□□ 0.78
CCDC171-206ENST00000474193 PI4K2AQ9BTU6 479 aa19.94■□□□□ 0.78
CCDC171-206ENST00000474193 DNAJC25Q9H1X3 360 aa19.94■□□□□ 0.78
CCDC171-206ENST00000474193 SNX25Q9H3E2 840 aa19.94■□□□□ 0.78
CCDC171-206ENST00000474193 ABCB6Q9NP58 842 aa19.94■□□□□ 0.78
CCDC171-206ENST00000474193 MRPS17Q9Y2R5 130 aaKnown RBP19.94■□□□□ 0.78
CCDC171-206ENST00000474193 NCAM2O15394 837 aa19.93■□□□□ 0.78
CCDC171-206ENST00000474193 CSH1P0DML2 217 aa19.93■□□□□ 0.78
CCDC171-206ENST00000474193 CSH2P0DML3 217 aa19.93■□□□□ 0.78
CCDC171-206ENST00000474193 RPL13P26373 211 aaKnown RBP19.93■□□□□ 0.78
CCDC171-206ENST00000474193 ATICP31939 592 aa19.93■□□□□ 0.78
CCDC171-206ENST00000474193 STARD6P59095 220 aa19.93■□□□□ 0.78
CCDC171-206ENST00000474193 SOWAHAQ2M3V2 549 aa19.93■□□□□ 0.78
CCDC171-206ENST00000474193 WDR72Q3MJ13 1102 aa19.93■□□□□ 0.78
CCDC171-206ENST00000474193 CWF19L1Q69YN2 538 aaKnown RBP19.93■□□□□ 0.78
CCDC171-206ENST00000474193 ADSSL1Q8N142 457 aa19.93■□□□□ 0.78
CCDC171-206ENST00000474193 TTC9BQ8N6N2 239 aa19.93■□□□□ 0.78
CCDC171-206ENST00000474193 MLKLQ8NB16 471 aa19.93■□□□□ 0.78
CCDC171-206ENST00000474193 CXorf38Q8TB03 319 aa19.93■□□□□ 0.78
CCDC171-206ENST00000474193 GIPC2Q8TF65 315 aa19.93■□□□□ 0.78
CCDC171-206ENST00000474193 TRPV4Q9HBA0 871 aa19.93■□□□□ 0.78
CCDC171-206ENST00000474193 TMEM63CQ9P1W3 806 aa19.93■□□□□ 0.78
CCDC171-206ENST00000474193 UXTQ9UBK9 157 aaPredicted RBP19.93■□□□□ 0.78
CCDC171-206ENST00000474193 GTF3C4Q9UKN8 822 aa19.93■□□□□ 0.78
CCDC171-206ENST00000474193 CDH9Q9ULB4 789 aa19.93■□□□□ 0.78
CCDC171-206ENST00000474193 KMT2EQ8IZD2 1858 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 KANSL1LA0AUZ9 987 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 BICDL2A1A5D9 508 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 H0Y858 1186 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 GABRDO14764 452 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 ZNF263O14978 683 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 PI15O43692 258 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 ACAT1P24752 427 aaKnown RBP19.92■□□□□ 0.78
CCDC171-206ENST00000474193 GNL1P36915 607 aaPredicted RBP19.92■□□□□ 0.78
CCDC171-206ENST00000474193 NLRP12P59046 1061 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 TCF15Q12870 199 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 GPR158Q5T848 1215 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 KLHL10Q6JEL2 608 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 RBM43Q6ZSC3 357 aaKnown RBP19.92■□□□□ 0.78
CCDC171-206ENST00000474193 TMC8Q8IU68 726 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 MFSD6LQ8IWD5 586 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 DTWD2Q8NBA8 298 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 DNASE1L2Q92874 299 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 FUBP3Q96I24 572 aaKnown RBP eCLIP19.92■□□□□ 0.78
CCDC171-206ENST00000474193 FAM84AQ96KN4 292 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 ZSWIM3Q96MP5 696 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 LPIN3Q9BQK8 851 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 LRRC3Q9BY71 257 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 PLA2G2FQ9BZM2 168 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 KCTD10Q9H3F6 313 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 MAGEC2Q9UBF1 373 aaPredicted RBP19.92■□□□□ 0.78
CCDC171-206ENST00000474193 PTPRJQ12913 1337 aa19.92■□□□□ 0.78
CCDC171-206ENST00000474193 MOSPD3O75425 235 aa19.91■□□□□ 0.78
CCDC171-206ENST00000474193 CST3P01034 146 aaPredicted RBP19.91■□□□□ 0.78
CCDC171-206ENST00000474193 NR3C1P04150 777 aa19.91■□□□□ 0.78
CCDC171-206ENST00000474193 WARSP23381 471 aaKnown RBP19.91■□□□□ 0.78
CCDC171-206ENST00000474193 GDI1P31150 447 aa19.91■□□□□ 0.78
CCDC171-206ENST00000474193 CDR1P51861 262 aa19.91■□□□□ 0.78
CCDC171-206ENST00000474193 CEP135Q66GS9 1140 aa19.91■□□□□ 0.78
CCDC171-206ENST00000474193 CCDC105Q8IYK2 499 aa19.91■□□□□ 0.78
CCDC171-206ENST00000474193 OR6B3Q8NGW1 331 aa19.91■□□□□ 0.78
CCDC171-206ENST00000474193 CSGALNACT1Q8TDX6 532 aa19.91■□□□□ 0.78
CCDC171-206ENST00000474193 PARD3BQ8TEW8 1205 aa19.91■□□□□ 0.78
CCDC171-206ENST00000474193 TMEM174Q8WUU8 243 aa19.91■□□□□ 0.78
CCDC171-206ENST00000474193 SYT15Q9BQS2 421 aa19.91■□□□□ 0.78
CCDC171-206ENST00000474193 TASP1Q9H6P5 420 aa19.91■□□□□ 0.78
CCDC171-206ENST00000474193 DMAC2Q9NW81 257 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms