RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 PDCL2Q8N4E4 241 aa14.42□□□□□ -0.1
COPS7B-219ENST00000474042 LRRC52Q8N7C0 313 aa14.42□□□□□ -0.1
COPS7B-219ENST00000474042 ZSWIM2Q8NEG5 633 aa14.42□□□□□ -0.1
COPS7B-219ENST00000474042 RIN3Q8TB24 985 aa14.42□□□□□ -0.1
COPS7B-219ENST00000474042 SAAL1Q96ER3 474 aa14.42□□□□□ -0.1
COPS7B-219ENST00000474042 ACCSQ96QU6 501 aa14.42□□□□□ -0.1
COPS7B-219ENST00000474042 PKMYT1Q99640 499 aa14.42□□□□□ -0.1
COPS7B-219ENST00000474042 FAM83CQ9BQN1 747 aa14.42□□□□□ -0.1
COPS7B-219ENST00000474042 FAM213AQ9BRX8 229 aa14.42□□□□□ -0.1
COPS7B-219ENST00000474042 RTKNQ9BST9 563 aa14.42□□□□□ -0.1
COPS7B-219ENST00000474042 FGFBP2Q9BYJ0 223 aa14.42□□□□□ -0.1
COPS7B-219ENST00000474042 MRPL44Q9H9J2 332 aaKnown RBP14.42□□□□□ -0.1
COPS7B-219ENST00000474042 ABCB6Q9NP58 842 aa14.42□□□□□ -0.1
COPS7B-219ENST00000474042 HPS4Q9NQG7 708 aa14.42□□□□□ -0.1
COPS7B-219ENST00000474042 L1RE1Q9UN81 338 aa14.42□□□□□ -0.1
COPS7B-219ENST00000474042 EXOC7Q9UPT5 735 aa14.42□□□□□ -0.1
COPS7B-219ENST00000474042 SOBPA7XYQ1 873 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 GCNT3O95395 438 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 ITGB3P05106 788 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 PDCP20941 246 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 GARTP22102 1010 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 GPR15P49685 360 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 TFAMQ00059 246 aaKnown RBP14.41□□□□□ -0.1
COPS7B-219ENST00000474042 TSPY1Q01534 308 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 ALCAMQ13740 583 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 TAF12Q16514 161 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 TMEM196Q5HYL7 178 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 RRAGBQ5VZM2 374 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 SV2BQ7L1I2 683 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 WDR5BQ86VZ2 330 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 STKLD1Q8NE28 680 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 SPATA18Q8TC71 538 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 USP13Q92995 863 aaPredicted RBP14.41□□□□□ -0.1
COPS7B-219ENST00000474042 CLIC6Q96NY7 704 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 GKN1Q9NS71 199 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 THG1LQ9NWX6 298 aaKnown RBP14.41□□□□□ -0.1
COPS7B-219ENST00000474042 RBAKQ9NYW8 714 aaPredicted RBP14.41□□□□□ -0.1
COPS7B-219ENST00000474042 TBC1D7Q9P0N9 293 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 ITGA11Q9UKX5 1188 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 AGAP1Q9UPQ3 857 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 CCL26Q9Y258 94 aa14.41□□□□□ -0.1
COPS7B-219ENST00000474042 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.41□□□□□ -0.1
COPS7B-219ENST00000474042 A0A087X0B3 334 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 OTOL1A6NHN0 477 aaPredicted RBP14.4□□□□□ -0.1
COPS7B-219ENST00000474042 NOL4O94818 638 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 LDHAP00338 332 aaKnown RBP14.4□□□□□ -0.1
COPS7B-219ENST00000474042 CSH1P0DML2 217 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 CSH2P0DML3 217 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 HOXC13P31276 330 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 AVPR1AP37288 418 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 TXLNAP40222 546 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 RUNX3Q13761 415 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 ZNF268Q14587 947 aaPredicted RBP14.4□□□□□ -0.1
COPS7B-219ENST00000474042 INTS6LQ5JSJ4 861 aaKnown RBP14.4□□□□□ -0.1
COPS7B-219ENST00000474042 HEATR6Q6AI08 1181 aaKnown RBP14.4□□□□□ -0.1
COPS7B-219ENST00000474042 SCARA3Q6AZY7 606 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 FSTL4Q6MZW2 842 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 PKN3Q6P5Z2 889 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.4□□□□□ -0.1
COPS7B-219ENST00000474042 OSTM1Q86WC4 334 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 TMEM86AQ8N2M4 240 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 MAB21L3Q8N8X9 362 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 NETO1Q8TDF5 533 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 TRMT2BQ96GJ1 504 aaKnown RBP14.4□□□□□ -0.1
COPS7B-219ENST00000474042 FAM84AQ96KN4 292 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 ACBD6Q9BR61 282 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 CBWD1Q9BRT8 395 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 PI4K2AQ9BTU6 479 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 SEMA4GQ9NTN9 838 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 GDAP2Q9NXN4 497 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 DDX43Q9NXZ2 648 aaKnown RBP14.4□□□□□ -0.1
COPS7B-219ENST00000474042 SIX4Q9UIU6 781 aa14.4□□□□□ -0.1
COPS7B-219ENST00000474042 TRDMT1O14717 391 aaKnown RBP14.39□□□□□ -0.11
COPS7B-219ENST00000474042 SLC30A4O14863 429 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 EXTL3O43909 919 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 HUS1O60921 280 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 PRPF40AO75400 957 aaKnown RBP14.39□□□□□ -0.11
COPS7B-219ENST00000474042 RPL10AP62906 217 aaKnown RBP14.39□□□□□ -0.11
COPS7B-219ENST00000474042 BFSP1Q12934 665 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 USP4Q13107 963 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 CSRP2Q16527 193 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 CCDC142Q17RM4 750 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 SDHAF4Q5VUM1 108 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 TXNDC8Q6A555 127 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 TRIM68Q6AZZ1 485 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 FAM173BQ6P4H8 233 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 CCDC73Q6ZRK6 1079 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 PRR23CQ6ZRP0 262 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 MON1AQ86VX9 555 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 FAM160A2Q8N612 972 aaPredicted RBP14.39□□□□□ -0.11
COPS7B-219ENST00000474042 MRPS31Q92665 395 aaKnown RBP14.39□□□□□ -0.11
COPS7B-219ENST00000474042 MYRFLQ96LU7 910 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 MTMR12Q9C0I1 747 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 TDP1Q9NUW8 608 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 UXTQ9UBK9 157 aaPredicted RBP14.39□□□□□ -0.11
COPS7B-219ENST00000474042 PCDHB13Q9Y5F0 798 aa14.39□□□□□ -0.11
COPS7B-219ENST00000474042 CCDC163A0A0D9SF12 145 aa14.38□□□□□ -0.11
COPS7B-219ENST00000474042 DCDC2BA2VCK2 349 aa14.38□□□□□ -0.11
COPS7B-219ENST00000474042 GOLGA8IPA6NC78 632 aa14.38□□□□□ -0.11
COPS7B-219ENST00000474042 GOLGA8JA6NMD2 632 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms