RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 BICD1Q96G01 975 aa10.4□□□□□ -0.74
MCF2L-223ENST00000473345 PYM1Q9BRP8 204 aaKnown RBP10.4□□□□□ -0.74
MCF2L-223ENST00000473345 LLPHQ9BRT6 129 aaKnown RBP10.4□□□□□ -0.74
MCF2L-223ENST00000473345 PI4K2AQ9BTU6 479 aa10.4□□□□□ -0.74
MCF2L-223ENST00000473345 EDEM2Q9BV94 578 aa10.4□□□□□ -0.74
MCF2L-223ENST00000473345 OXCT2Q9BYC2 517 aaPredicted RBP10.4□□□□□ -0.74
MCF2L-223ENST00000473345 RPF1Q9H9Y2 349 aaKnown RBP10.4□□□□□ -0.74
MCF2L-223ENST00000473345 HSFX1Q9UBD0 423 aa10.4□□□□□ -0.74
MCF2L-223ENST00000473345 DAXXQ9UER7 740 aaPredicted RBP10.4□□□□□ -0.74
MCF2L-223ENST00000473345 DENND4CQ5VZ89 1909 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 VWA3AA6NCI4 1184 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 C2orf78A6NCI8 922 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 HNRNPDLO14979 420 aaKnown RBP10.39□□□□□ -0.75
MCF2L-223ENST00000473345 ACAT1P24752 427 aaKnown RBP10.39□□□□□ -0.75
MCF2L-223ENST00000473345 CYP2F1P24903 491 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 CDC25CP30307 473 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 OPRD1P41143 372 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 LIG4P49917 911 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 NOVA1P51513 510 aaKnown RBP10.39□□□□□ -0.75
MCF2L-223ENST00000473345 USP4Q13107 963 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 DMC1Q14565 340 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 MCM6Q14566 821 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 TMEM132DQ14C87 1099 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 EML3Q32P44 896 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 ARHGAP15Q53QZ3 475 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 ARMCX5Q6P1M9 558 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 UNQ6494/PRO21346Q6UXR6 183 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 DTHD1Q6ZMT9 781 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 ITIH5Q86UX2 942 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 DDX1Q92499 740 aaKnown RBP10.39□□□□□ -0.75
MCF2L-223ENST00000473345 P2RY13Q9BPV8 354 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 MSTO1Q9BUK6 570 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 TIPINQ9BVW5 301 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 FGFBP2Q9BYJ0 223 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 TPSD1Q9BZJ3 242 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 ECT2Q9H8V3 914 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 FSCN3Q9NQT6 498 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 VPS45Q9NRW7 570 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 TDP1Q9NUW8 608 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 GCNT4Q9P109 453 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 SLC8A2Q9UPR5 921 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 NME7Q9Y5B8 376 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 PCDHGA5Q9Y5G8 931 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 AKAP13Q12802 2813 aa10.39□□□□□ -0.75
MCF2L-223ENST00000473345 K7ENM7 598 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 K7EQS6 105 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 SCAMP3O14828 347 aaKnown RBP10.38□□□□□ -0.75
MCF2L-223ENST00000473345 AKAP3O75969 853 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 CD2BP2O95400 341 aaKnown RBP10.38□□□□□ -0.75
MCF2L-223ENST00000473345 CAVIN2O95810 425 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 TUFMP49411 452 aaKnown RBP10.38□□□□□ -0.75
MCF2L-223ENST00000473345 SMTNP53814 917 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 IRX4P78413 519 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 CREB5Q02930 508 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 ZNF252P-AS1Q0IIN9 211 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 GRSF1Q12849 480 aaKnown RBP eCLIP10.38□□□□□ -0.75
MCF2L-223ENST00000473345 FOXC1Q12948 553 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 DHX8Q14562 1220 aaKnown RBP10.38□□□□□ -0.75
MCF2L-223ENST00000473345 MTF1Q14872 753 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 SH3PXD2AQ5TCZ1 1133 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 PMS2CLQ68D20 193 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 TMEM92Q6UXU6 159 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 USP49Q70CQ1 688 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 SYT13Q7L8C5 426 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 MON1AQ86VX9 555 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 GPBP1Q86WP2 473 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 PDCL2Q8N4E4 241 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 CAMKK1Q8N5S9 505 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 KDF1Q8NAX2 398 aaPredicted RBP10.38□□□□□ -0.75
MCF2L-223ENST00000473345 CCSER1Q9C0I3 900 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 ZDHHC4Q9NPG8 344 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 TMEM74BQ9NUR3 256 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 DPP3Q9NY33 737 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 NOL7Q9UMY1 257 aaKnown RBP10.38□□□□□ -0.75
MCF2L-223ENST00000473345 L1RE1Q9UN81 338 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 MAGED2Q9UNF1 606 aaPredicted RBP10.38□□□□□ -0.75
MCF2L-223ENST00000473345 STYXL1Q9Y6J8 313 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 WDFY3Q8IZQ1 3526 aa10.38□□□□□ -0.75
MCF2L-223ENST00000473345 TAF4O00268 1085 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 ATP2C2O75185 946 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 PPP1R37O75864 691 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 NOL4O94818 638 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 FGF19O95750 216 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 USP46P62068 366 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 GTF2BQ00403 316 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 VEPH1Q14D04 833 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 KARSQ15046 597 aaKnown RBP10.37□□□□□ -0.75
MCF2L-223ENST00000473345 C8orf34Q49A92 452 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 KIAA1211LQ6NV74 962 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 RASSF3Q86WH2 238 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 C12orf40Q86WS4 652 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 ARL14EPQ8N8R7 260 aaPredicted RBP10.37□□□□□ -0.75
MCF2L-223ENST00000473345 MDGA1Q8NFP4 955 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 SPPL2BQ8TCT7 592 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 USP33Q8TEY7 942 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 OSCP1Q8WVF1 389 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 RLN3Q8WXF3 142 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 CD101Q93033 1021 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 FNBP1Q96RU3 617 aa10.37□□□□□ -0.75
MCF2L-223ENST00000473345 STRA6Q9BX79 667 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms