RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 SHDQ96IW2 340 aa24.15■■□□□ 1.46
PTP4A1-203ENST00000473334 SYT15Q9BQS2 421 aa24.15■■□□□ 1.46
PTP4A1-203ENST00000473334 ATXN3LQ9H3M9 355 aa24.15■■□□□ 1.46
PTP4A1-203ENST00000473334 CDH9Q9ULB4 789 aa24.15■■□□□ 1.46
PTP4A1-203ENST00000473334 NUP210Q8TEM1 1887 aaPredicted RBP24.15■■□□□ 1.46
PTP4A1-203ENST00000473334 PHACTR2O75167 634 aa24.14■■□□□ 1.45
PTP4A1-203ENST00000473334 CDC25CP30307 473 aa24.14■■□□□ 1.45
PTP4A1-203ENST00000473334 ATICP31939 592 aa24.14■■□□□ 1.45
PTP4A1-203ENST00000473334 TNNC1P63316 161 aa24.14■■□□□ 1.45
PTP4A1-203ENST00000473334 CLDN10P78369 228 aa24.14■■□□□ 1.45
PTP4A1-203ENST00000473334 BIRC3Q13489 604 aa24.14■■□□□ 1.45
PTP4A1-203ENST00000473334 MLF2Q15773 248 aaPredicted RBP24.14■■□□□ 1.45
PTP4A1-203ENST00000473334 ARHGAP15Q53QZ3 475 aa24.14■■□□□ 1.45
PTP4A1-203ENST00000473334 TDRD10Q5VZ19 366 aaKnown RBP24.14■■□□□ 1.45
PTP4A1-203ENST00000473334 SYAP1Q96A49 352 aaPredicted RBP24.14■■□□□ 1.45
PTP4A1-203ENST00000473334 GCNAQ96QF7 691 aa24.14■■□□□ 1.45
PTP4A1-203ENST00000473334 MAPK8IP1Q9UQF2 711 aa24.14■■□□□ 1.45
PTP4A1-203ENST00000473334 FRMD4BQ9Y2L6 1034 aa24.14■■□□□ 1.45
PTP4A1-203ENST00000473334 LMO2P25791 158 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 STARD6P59095 220 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 MYL6P60660 151 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 RPL10AP62906 217 aaKnown RBP24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 PRKCQQ04759 706 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 GRM2Q14416 872 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 NFIL3Q16649 462 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 CCDC142Q17RM4 750 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 WDR72Q3MJ13 1102 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 CFAP221Q4G0U5 840 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 SLC44A4Q53GD3 710 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 STXBP5Q5T5C0 1151 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 CEP135Q66GS9 1140 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 FAM171BQ6P995 826 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 VITQ6UXI7 678 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 SPATA2LQ8IUW3 424 aaPredicted RBP24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 DEPDC1BQ8WUY9 529 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 E2F7Q96AV8 911 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 FUBP3Q96I24 572 aaKnown RBP eCLIP24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 MKNK1Q9BUB5 465 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 IRF2BPLQ9H1B7 796 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 IL21Q9HBE4 155 aa24.13■■□□□ 1.45
PTP4A1-203ENST00000473334 DENND4CQ5VZ89 1909 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 MYBPHLA2RUH7 354 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 TACC1O75410 805 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 FAM163BP0C2L3 166 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 CSH1P0DML2 217 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 CSH2P0DML3 217 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 NR2F2P24468 414 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 CYP2F1P24903 491 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 VIPR2P41587 438 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 GPR15P49685 360 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 PSMC1P62191 440 aaKnown RBP24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 FAM160A1Q05DH4 1040 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 PNOCQ13519 176 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 GPR158Q5T848 1215 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 C4orf50Q6ZRC1 276 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 ENGASEQ8NFI3 743 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 TMC2Q8TDI7 906 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 DNASE1L2Q92874 299 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 MRPL45Q9BRJ2 306 aaKnown RBP24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 TRMT61BQ9BVS5 477 aaKnown RBP24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 XYLT2Q9H1B5 865 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 SNX25Q9H3E2 840 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 VRTNQ9H8Y1 702 aa24.12■■□□□ 1.45
PTP4A1-203ENST00000473334 OBSL1O75147 1896 aa24.11■■□□□ 1.45
PTP4A1-203ENST00000473334 MAPK13O15264 365 aa24.11■■□□□ 1.45
PTP4A1-203ENST00000473334 ATP2C2O75185 946 aa24.11■■□□□ 1.45
PTP4A1-203ENST00000473334 C4BPAP04003 597 aaKnown RBP24.11■■□□□ 1.45
PTP4A1-203ENST00000473334 PDGFRBP09619 1106 aa24.11■■□□□ 1.45
PTP4A1-203ENST00000473334 PSMC3P17980 439 aa24.11■■□□□ 1.45
PTP4A1-203ENST00000473334 DLG4P78352 724 aa24.11■■□□□ 1.45
PTP4A1-203ENST00000473334 CYP4F8P98187 520 aa24.11■■□□□ 1.45
PTP4A1-203ENST00000473334 MAPRE1Q15691 268 aaKnown RBP24.11■■□□□ 1.45
PTP4A1-203ENST00000473334 CCDC105Q8IYK2 499 aa24.11■■□□□ 1.45
PTP4A1-203ENST00000473334 BRD9Q9H8M2 597 aa24.11■■□□□ 1.45
PTP4A1-203ENST00000473334 CRTAC1Q9NQ79 661 aa24.11■■□□□ 1.45
PTP4A1-203ENST00000473334 RMND1Q9NWS8 449 aa24.11■■□□□ 1.45
PTP4A1-203ENST00000473334 PTPRDP23468 1912 aa24.11■■□□□ 1.45
PTP4A1-203ENST00000473334 COL4A3Q01955 1670 aa24.11■■□□□ 1.45
PTP4A1-203ENST00000473334 NCANO14594 1321 aa24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 COL4A2P08572 1712 aa24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 MIA3Q5JRA6 1907 aa24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 HEPACAM2A8MVW5 462 aa24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 HMGA1P17096 107 aaKnown RBP24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 GNL1P36915 607 aaPredicted RBP24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 NCOA4Q13772 614 aa24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 DDR2Q16832 855 aa24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 ZNF699Q32M78 642 aa24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 SDHAF4Q5VUM1 108 aa24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 ARID3BQ8IVW6 561 aaPredicted RBP24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 MFSD6LQ8IWD5 586 aa24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 PJA1Q8NG27 643 aa24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 OR6B3Q8NGW1 331 aa24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 MYLPFQ96A32 169 aa24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 DDX23Q9BUQ8 820 aaKnown RBP24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 TASP1Q9H6P5 420 aa24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 MAGEC2Q9UBF1 373 aaPredicted RBP24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 NXF1Q9UBU9 619 aaKnown RBP24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 SIT1Q9Y3P8 196 aa24.1■■□□□ 1.45
PTP4A1-203ENST00000473334 KANSL1LA0AUZ9 987 aa24.09■■□□□ 1.45
PTP4A1-203ENST00000473334 CLSTN1O94985 981 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms