RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 FAM26FQ5R3K3 315 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 C1orf228Q6PIY5 440 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 DPH6Q7L8W6 267 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 LIMS2Q7Z4I7 341 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 TMEM150AQ86TG1 271 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 SUMF1Q8NBK3 374 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 OR5B17Q8NGF7 314 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 MSANTD3Q96H12 275 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 ANKRD36BP1Q96IX9 119 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 PI4K2AQ9BTU6 479 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 CHRDQ9H2X0 955 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 C8orf33Q9H7E9 229 aaPredicted RBP16.43■□□□□ 0.22
VTI1A-203ENST00000472892 LMAN1LQ9HAT1 526 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 ABCB6Q9NP58 842 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 PRMT8Q9NR22 394 aaPredicted RBP16.43■□□□□ 0.22
VTI1A-203ENST00000472892 PTPRJQ12913 1337 aa16.43■□□□□ 0.22
VTI1A-203ENST00000472892 F5P12259 2224 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 SOBPA7XYQ1 873 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 PRPF40AO75400 957 aaKnown RBP16.42■□□□□ 0.22
VTI1A-203ENST00000472892 F11P03951 625 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 CHRNB1P11230 501 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 CCNE1P24864 410 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 NLRP12P59046 1061 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 SNRPFP62306 86 aaKnown RBP16.42■□□□□ 0.22
VTI1A-203ENST00000472892 CYP4F8P98187 520 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 MYO1EQ12965 1108 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 DUOXA2Q1HG44 320 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 SOWAHAQ2M3V2 549 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 FOXD4L6Q3SYB3 417 aaPredicted RBP16.42■□□□□ 0.22
VTI1A-203ENST00000472892 ARHGAP29Q52LW3 1261 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 RESP18Q5W5W9 173 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 LMBRD2Q68DH5 695 aaPredicted RBP16.42■□□□□ 0.22
VTI1A-203ENST00000472892 FOXD4L3Q6VB84 417 aaPredicted RBP16.42■□□□□ 0.22
VTI1A-203ENST00000472892 UNC13DQ70J99 1090 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 OSTM1Q86WC4 334 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 WDR49Q8IV35 697 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 ZBTB44Q8NCP5 570 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 SCFD1Q8WVM8 642 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 GCNAQ96QF7 691 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 IER2Q9BTL4 223 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 AGPAT3Q9NRZ7 376 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 ZSCAN32Q9NX65 697 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 GTF3C4Q9UKN8 822 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 PCDHGA2Q9Y5H1 932 aa16.42■□□□□ 0.22
VTI1A-203ENST00000472892 PVALEFA0A1B0GWK0 134 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 MYBPHLA2RUH7 354 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 KINO60870 393 aaKnown RBP16.41■□□□□ 0.22
VTI1A-203ENST00000472892 LILRB5O75023 590 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 PRAMEF12O95522 483 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 TNNC2P02585 160 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 HSP90AA1P07900 732 aaKnown RBP16.41■□□□□ 0.22
VTI1A-203ENST00000472892 ACAT1P24752 427 aaKnown RBP16.41■□□□□ 0.22
VTI1A-203ENST00000472892 CYP2F1P24903 491 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 ME1P48163 572 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 GPR15P49685 360 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 PKP1Q13835 747 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 FAM171BQ6P995 826 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 ADGRF2Q8IZF7 708 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 CMTM8Q8IZV2 173 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 CELF5Q8N6W0 485 aaKnown RBP16.41■□□□□ 0.22
VTI1A-203ENST00000472892 BPIFB1Q8TDL5 484 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 ATRIPQ8WXE1 791 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 HPDLQ96IR7 371 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 ZFYVE19Q96K21 471 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 FAM126AQ9BYI3 521 aaPredicted RBP16.41■□□□□ 0.22
VTI1A-203ENST00000472892 FAM13BQ9NYF5 915 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 RCOR1Q9UKL0 485 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 CFAP45Q9UL16 551 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 R3HCC1Q9Y3T6 440 aaKnown RBP16.41■□□□□ 0.22
VTI1A-203ENST00000472892 FANCMQ8IYD8 2048 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 UBE4BO95155 1302 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 TCHHQ07283 1943 aa16.41■□□□□ 0.22
VTI1A-203ENST00000472892 GVINP1Q7Z2Y8 2422 aa16.4■□□□□ 0.22
VTI1A-203ENST00000472892 PATJQ8NI35 1801 aa16.4■□□□□ 0.22
VTI1A-203ENST00000472892 SLC38A8A6NNN8 435 aa16.4■□□□□ 0.22
VTI1A-203ENST00000472892 CSH1P0DML2 217 aa16.4■□□□□ 0.22
VTI1A-203ENST00000472892 CSH2P0DML3 217 aa16.4■□□□□ 0.22
VTI1A-203ENST00000472892 TDGF1P13385 188 aa16.4■□□□□ 0.22
VTI1A-203ENST00000472892 DDX6P26196 483 aaKnown RBP eCLIP16.4■□□□□ 0.22
VTI1A-203ENST00000472892 PCSK1P29120 753 aa16.4■□□□□ 0.22
VTI1A-203ENST00000472892 CASP1P29466 404 aa16.4■□□□□ 0.22
VTI1A-203ENST00000472892 KPNA1P52294 538 aaPredicted RBP16.4■□□□□ 0.22
VTI1A-203ENST00000472892 RPL10AP62906 217 aaKnown RBP16.4■□□□□ 0.22
VTI1A-203ENST00000472892 PLCB2Q00722 1185 aa16.4■□□□□ 0.22
VTI1A-203ENST00000472892 SNRNP35Q16560 246 aaKnown RBP16.4■□□□□ 0.22
VTI1A-203ENST00000472892 DDR2Q16832 855 aa16.4■□□□□ 0.22
VTI1A-203ENST00000472892 BMT2Q1RMZ1 405 aa16.4■□□□□ 0.22
VTI1A-203ENST00000472892 CFAP221Q4G0U5 840 aa16.4■□□□□ 0.22
VTI1A-203ENST00000472892 TSSK4Q6SA08 328 aa16.4■□□□□ 0.22
VTI1A-203ENST00000472892 TRAPPC11Q7Z392 1133 aa16.4■□□□□ 0.22
VTI1A-203ENST00000472892 RALGPS2Q86X27 583 aaPredicted RBP16.4■□□□□ 0.22
VTI1A-203ENST00000472892 FUBP3Q96I24 572 aaKnown RBP eCLIP16.4■□□□□ 0.22
VTI1A-203ENST00000472892 MYRFLQ96LU7 910 aa16.4■□□□□ 0.22
VTI1A-203ENST00000472892 SMG9Q9H0W8 520 aaKnown RBP16.4■□□□□ 0.22
VTI1A-203ENST00000472892 BLZF1Q9H2G9 400 aa16.4■□□□□ 0.22
VTI1A-203ENST00000472892 THG1LQ9NWX6 298 aaKnown RBP16.4■□□□□ 0.22
VTI1A-203ENST00000472892 GTSE1Q9NYZ3 720 aa16.4■□□□□ 0.22
VTI1A-203ENST00000472892 TICRRQ7Z2Z1 1910 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 WDR87Q6ZQQ6 2873 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 ZNF292O60281 2723 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms