RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 PDHA1P08559 390 aa6.03□□□□□ -1.44
CD46-213ENST00000471987 PIM1P11309 404 aaPredicted RBP6.03□□□□□ -1.44
CD46-213ENST00000471987 JUPP14923 745 aa6.03□□□□□ -1.44
CD46-213ENST00000471987 BOP1Q14137 746 aaKnown RBP6.03□□□□□ -1.44
CD46-213ENST00000471987 CCDC157Q569K6 752 aa6.03□□□□□ -1.44
CD46-213ENST00000471987 AARS2Q5JTZ9 985 aaKnown RBP6.03□□□□□ -1.44
CD46-213ENST00000471987 LAYNQ6UX15 382 aa6.03□□□□□ -1.44
CD46-213ENST00000471987 ZNF782Q6ZMW2 699 aaPredicted RBP6.03□□□□□ -1.44
CD46-213ENST00000471987 ZNF804AQ7Z570 1209 aa6.03□□□□□ -1.44
CD46-213ENST00000471987 BRIX1Q8TDN6 353 aaKnown RBP6.03□□□□□ -1.44
CD46-213ENST00000471987 SLC46A1Q96NT5 459 aa6.03□□□□□ -1.44
CD46-213ENST00000471987 HESX1Q9UBX0 185 aa6.03□□□□□ -1.44
CD46-213ENST00000471987 PCDHA1Q9Y5I3 950 aa6.03□□□□□ -1.44
CD46-213ENST00000471987 COL4A3BPQ9Y5P4 624 aa6.03□□□□□ -1.44
CD46-213ENST00000471987 QSOX1O00391 747 aa6.02□□□□□ -1.45
CD46-213ENST00000471987 SLC16A3O15427 465 aaKnown RBP6.02□□□□□ -1.45
CD46-213ENST00000471987 ONECUT2O95948 504 aa6.02□□□□□ -1.45
CD46-213ENST00000471987 ATXN1LP0C7T5 689 aaKnown RBP6.02□□□□□ -1.45
CD46-213ENST00000471987 EXOSC9Q06265 439 aaKnown RBP6.02□□□□□ -1.45
CD46-213ENST00000471987 LONRF3Q496Y0 759 aa6.02□□□□□ -1.45
CD46-213ENST00000471987 SLC44A4Q53GD3 710 aa6.02□□□□□ -1.45
CD46-213ENST00000471987 EMC10Q5UCC4 262 aa6.02□□□□□ -1.45
CD46-213ENST00000471987 ZNF425Q6IV72 752 aa6.02□□□□□ -1.45
CD46-213ENST00000471987 WDR53Q7Z5U6 358 aaPredicted RBP6.02□□□□□ -1.45
CD46-213ENST00000471987 FANCBQ8NB91 859 aa6.02□□□□□ -1.45
CD46-213ENST00000471987 HSPBAP1Q96EW2 488 aa6.02□□□□□ -1.45
CD46-213ENST00000471987 PCDH12Q9NPG4 1184 aa6.02□□□□□ -1.45
CD46-213ENST00000471987 SH3BP4Q9P0V3 963 aa6.02□□□□□ -1.45
CD46-213ENST00000471987 SH2B3Q9UQQ2 575 aa6.02□□□□□ -1.45
CD46-213ENST00000471987 H3BUI4 141 aa6.01□□□□□ -1.45
CD46-213ENST00000471987 IGSF3O75054 1194 aa6.01□□□□□ -1.45
CD46-213ENST00000471987 PRR35P0CG20 571 aa6.01□□□□□ -1.45
CD46-213ENST00000471987 AKAP5P24588 427 aa6.01□□□□□ -1.45
CD46-213ENST00000471987 CERS1P27544 350 aa6.01□□□□□ -1.45
CD46-213ENST00000471987 PXNP49023 591 aaPredicted RBP6.01□□□□□ -1.45
CD46-213ENST00000471987 ZNF134P52741 427 aa6.01□□□□□ -1.45
CD46-213ENST00000471987 EEFSECP57772 596 aaKnown RBP6.01□□□□□ -1.45
CD46-213ENST00000471987 LOXL3P58215 753 aa6.01□□□□□ -1.45
CD46-213ENST00000471987 SSBP2P81877 361 aaPredicted RBP6.01□□□□□ -1.45
CD46-213ENST00000471987 AMOTQ4VCS5 1084 aa6.01□□□□□ -1.45
CD46-213ENST00000471987 MTX3Q5HYI7 312 aa6.01□□□□□ -1.45
CD46-213ENST00000471987 MAVSQ7Z434 540 aa6.01□□□□□ -1.45
CD46-213ENST00000471987 CATIPQ7Z7H3 387 aa6.01□□□□□ -1.45
CD46-213ENST00000471987 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.01□□□□□ -1.45
CD46-213ENST00000471987 CHMP4CQ96CF2 233 aa6.01□□□□□ -1.45
CD46-213ENST00000471987 TTYH3Q9C0H2 523 aa6.01□□□□□ -1.45
CD46-213ENST00000471987 LUC7L2Q9Y383 392 aaKnown RBP6.01□□□□□ -1.45
CD46-213ENST00000471987 H0YIZ8 118 aa6□□□□□ -1.45
CD46-213ENST00000471987 LATS1O95835 1130 aa6□□□□□ -1.45
CD46-213ENST00000471987 IL6RP08887 468 aaPredicted RBP6□□□□□ -1.45
CD46-213ENST00000471987 VCAM1P19320 739 aa6□□□□□ -1.45
CD46-213ENST00000471987 KELP23276 732 aa6□□□□□ -1.45
CD46-213ENST00000471987 PPIFP30405 207 aaKnown RBP6□□□□□ -1.45
CD46-213ENST00000471987 CYP2C18P33260 490 aa6□□□□□ -1.45
CD46-213ENST00000471987 NKX6-1P78426 367 aaPredicted RBP6□□□□□ -1.45
CD46-213ENST00000471987 PLS1Q14651 629 aa6□□□□□ -1.45
CD46-213ENST00000471987 IQCB1Q15051 598 aa6□□□□□ -1.45
CD46-213ENST00000471987 PROSER3Q2NL68 480 aa6□□□□□ -1.45
CD46-213ENST00000471987 TREML2Q5T2D2 321 aa6□□□□□ -1.45
CD46-213ENST00000471987 ZBTB46Q86UZ6 589 aa6□□□□□ -1.45
CD46-213ENST00000471987 ZCRB1Q8TBF4 217 aaKnown RBP6□□□□□ -1.45
CD46-213ENST00000471987 REPS1Q96D71 796 aa6□□□□□ -1.45
CD46-213ENST00000471987 MVB12AQ96EY5 273 aa6□□□□□ -1.45
CD46-213ENST00000471987 SLC35A4Q96G79 324 aa6□□□□□ -1.45
CD46-213ENST00000471987 CDK5RAP3Q96JB5 506 aa6□□□□□ -1.45
CD46-213ENST00000471987 MOGAT1Q96PD6 335 aa6□□□□□ -1.45
CD46-213ENST00000471987 PTDSS2Q9BVG9 487 aa6□□□□□ -1.45
CD46-213ENST00000471987 GTPBP4Q9BZE4 634 aaKnown RBP6□□□□□ -1.45
CD46-213ENST00000471987 NRIP3Q9NQ35 241 aa6□□□□□ -1.45
CD46-213ENST00000471987 HOMER2Q9NSB8 354 aa6□□□□□ -1.45
CD46-213ENST00000471987 ZNF213O14771 459 aa5.99□□□□□ -1.45
CD46-213ENST00000471987 DCLK1O15075 740 aa5.99□□□□□ -1.45
CD46-213ENST00000471987 DNAJB5O75953 348 aa5.99□□□□□ -1.45
CD46-213ENST00000471987 LIPAP38571 399 aa5.99□□□□□ -1.45
CD46-213ENST00000471987 ZNF626Q68DY1 528 aa5.99□□□□□ -1.45
CD46-213ENST00000471987 PCSK9Q8NBP7 692 aaKnown RBP5.99□□□□□ -1.45
CD46-213ENST00000471987 MTFMTQ96DP5 389 aaKnown RBP5.99□□□□□ -1.45
CD46-213ENST00000471987 NUP88Q99567 741 aaPredicted RBP5.99□□□□□ -1.45
CD46-213ENST00000471987 SARS2Q9NP81 518 aaKnown RBP5.99□□□□□ -1.45
CD46-213ENST00000471987 DLL3Q9NYJ7 618 aa5.99□□□□□ -1.45
CD46-213ENST00000471987 SERTAD3Q9UJW9 196 aa5.99□□□□□ -1.45
CD46-213ENST00000471987 PLEKHM1Q9Y4G2 1056 aa5.99□□□□□ -1.45
CD46-213ENST00000471987 UNC5CO95185 931 aa5.98□□□□□ -1.45
CD46-213ENST00000471987 HDCP19113 662 aa5.98□□□□□ -1.45
CD46-213ENST00000471987 EPHB2P29323 1055 aa5.98□□□□□ -1.45
CD46-213ENST00000471987 KCNJ5P48544 419 aa5.98□□□□□ -1.45
CD46-213ENST00000471987 CLCN2P51788 898 aa5.98□□□□□ -1.45
CD46-213ENST00000471987 SOX8P57073 446 aa5.98□□□□□ -1.45
CD46-213ENST00000471987 TUBA4AP68366 448 aa5.98□□□□□ -1.45
CD46-213ENST00000471987 PCID2Q5JVF3 399 aa5.98□□□□□ -1.45
CD46-213ENST00000471987 ARHGAP40Q5TG30 622 aa5.98□□□□□ -1.45
CD46-213ENST00000471987 PRAMEF17Q5VTA0 474 aa5.98□□□□□ -1.45
CD46-213ENST00000471987 NEK8Q86SG6 692 aa5.98□□□□□ -1.45
CD46-213ENST00000471987 TCF7L1Q9HCS4 588 aa5.98□□□□□ -1.45
CD46-213ENST00000471987 DUSP22Q9NRW4 184 aa5.98□□□□□ -1.45
CD46-213ENST00000471987 SMIM22K7EJ46 135 aa5.97□□□□□ -1.45
CD46-213ENST00000471987 LILRA4P59901 499 aa5.97□□□□□ -1.45
CD46-213ENST00000471987 SATB1Q01826 763 aa5.97□□□□□ -1.45
CD46-213ENST00000471987 BRDTQ58F21 947 aaPredicted RBP5.97□□□□□ -1.45
CD46-213ENST00000471987 KHDC1LQ5JSQ8 128 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms