RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 ASXL3Q9C0F0 2248 aa4.21□□□□□ -1.74
LRCH3-213ENST00000471667 RALGAPA1Q6GYQ0 2036 aa4.21□□□□□ -1.74
LRCH3-213ENST00000471667 SIPA1L1O43166 1804 aa4.21□□□□□ -1.74
LRCH3-213ENST00000471667 CCDC171Q6TFL3 1326 aa4.21□□□□□ -1.74
LRCH3-213ENST00000471667 CCDC163A0A0D9SF12 145 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 NOP56O00567 594 aaKnown RBP4.2□□□□□ -1.74
LRCH3-213ENST00000471667 INPPL1O15357 1258 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 OPHN1O60890 802 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 NDUFB10O96000 172 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 NBPF7P0C2Y1 421 aaPredicted RBP4.2□□□□□ -1.74
LRCH3-213ENST00000471667 SMIM10L2AP0DMW4 78 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 SMIM10L2BP0DMW5 78 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 VAV1P15498 845 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 RPL17P18621 184 aaKnown RBP4.2□□□□□ -1.74
LRCH3-213ENST00000471667 CR2P20023 1033 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 POLGP54098 1239 aaPredicted RBP4.2□□□□□ -1.74
LRCH3-213ENST00000471667 UCNP55089 124 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 NCKAP1LP55160 1127 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 TIMM10P62072 90 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 DYNLL1P63167 89 aaKnown RBP4.2□□□□□ -1.74
LRCH3-213ENST00000471667 CXADRP78310 365 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 CLCQ05315 142 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 RNASELQ05823 741 aaKnown RBP4.2□□□□□ -1.74
LRCH3-213ENST00000471667 GABPAQ06546 454 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 ARHGAP1Q07960 439 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 BAATQ14032 418 aaPredicted RBP4.2□□□□□ -1.74
LRCH3-213ENST00000471667 LPIN1Q14693 890 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 WDR43Q15061 677 aaKnown RBP eCLIP4.2□□□□□ -1.74
LRCH3-213ENST00000471667 LY6KQ17RY6 165 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 SEZ6Q53EL9 994 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 CCDC158Q5M9N0 1113 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 TTC39AQ5SRH9 613 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 BROXQ5VW32 411 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 CRTC3Q6UUV7 619 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 RPTNQ6XPR3 784 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 RNF207Q6ZRF8 634 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 GK5Q6ZS86 529 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 CCDC146Q8IYE0 955 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 VPS52Q8N1B4 723 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 MIGA1Q8NAN2 632 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 MED8Q96G25 268 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 ZC3H10Q96K80 434 aaKnown RBP4.2□□□□□ -1.74
LRCH3-213ENST00000471667 SLC6A18Q96N87 628 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 MRPL9Q9BYD2 267 aaKnown RBP4.2□□□□□ -1.74
LRCH3-213ENST00000471667 ANTXR1Q9H6X2 564 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 MAN1C1Q9NR34 630 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 AP5S1Q9NUS5 200 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 UBP1Q9NZI7 540 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 IMPACTQ9P2X3 320 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 ACSL6Q9UKU0 697 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 SLC8A2Q9UPR5 921 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 MRVI1Q9Y6F6 885 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 DDX49Q9Y6V7 483 aaKnown RBP4.2□□□□□ -1.74
LRCH3-213ENST00000471667 WDFY3Q8IZQ1 3526 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 PATJQ8NI35 1801 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 MCM3APO60318 1980 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 ACACAQ13085 2346 aa4.2□□□□□ -1.74
LRCH3-213ENST00000471667 GREB1Q4ZG55 1949 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 TICRRQ7Z2Z1 1910 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 ZMYM2Q9UBW7 1377 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 ZC3H12DA2A288 527 aaKnown RBP4.19□□□□□ -1.74
LRCH3-213ENST00000471667 BCLAF3A2AJT9 711 aaKnown RBP4.19□□□□□ -1.74
LRCH3-213ENST00000471667 TMEM232C9JQI7 657 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 BUB1BO60566 1050 aaPredicted RBP4.19□□□□□ -1.74
LRCH3-213ENST00000471667 N4BP1O75113 896 aaKnown RBP4.19□□□□□ -1.74
LRCH3-213ENST00000471667 ATG13O75143 517 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 GLUD1P00367 558 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 AFPP02771 609 aaKnown RBP4.19□□□□□ -1.74
LRCH3-213ENST00000471667 FTH1P19P0C7X4 201 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 CTSAP10619 480 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 HLA-EP13747 358 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 NME1P15531 152 aaKnown RBP4.19□□□□□ -1.74
LRCH3-213ENST00000471667 CD52P31358 61 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 NFKB2Q00653 900 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 AUHQ13825 339 aaKnown RBP4.19□□□□□ -1.74
LRCH3-213ENST00000471667 TRIP6Q15654 476 aaKnown RBP4.19□□□□□ -1.74
LRCH3-213ENST00000471667 STXBP2Q15833 593 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 PLEKHN1Q494U1 663 aaPredicted RBP4.19□□□□□ -1.74
LRCH3-213ENST00000471667 DGKKQ5KSL6 1271 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 FBXO47Q5MNV8 452 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 KCNV1Q6PIU1 500 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 SLC24A5Q71RS6 500 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 REXO1Q8N1G1 1221 aaKnown RBP4.19□□□□□ -1.74
LRCH3-213ENST00000471667 TSPYL6Q8N831 410 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 ANKRD44Q8N8A2 993 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 TP53I13Q8NBR0 393 aaPredicted RBP4.19□□□□□ -1.74
LRCH3-213ENST00000471667 TMEM52Q8NDY8 209 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 SLC22A17Q8WUG5 538 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 FGF14Q92915 247 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 TNPO1Q92973 898 aaKnown RBP4.19□□□□□ -1.74
LRCH3-213ENST00000471667 NXPE2Q96DL1 559 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 SPATA33Q96N06 139 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 JMJD8Q96S16 334 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 TRIM4Q9C037 500 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 TMEM117Q9H0C3 514 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 RNPEPQ9H4A4 650 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 HEBP1Q9NRV9 189 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 ADAMTS1Q9UHI8 967 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 CDH7Q9ULB5 785 aa4.19□□□□□ -1.74
LRCH3-213ENST00000471667 SYNPO2Q9UMS6 1093 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms