RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 NUP62CLQ9H1M0 184 aa13.28□□□□□ -0.28
LINC00888-202ENST00000471496 CYP4F11Q9HBI6 524 aa13.28□□□□□ -0.28
LINC00888-202ENST00000471496 WDR6Q9NNW5 1121 aaKnown RBP13.28□□□□□ -0.28
LINC00888-202ENST00000471496 TMLHEQ9NVH6 421 aa13.28□□□□□ -0.28
LINC00888-202ENST00000471496 MAFFQ9ULX9 164 aa13.28□□□□□ -0.28
LINC00888-202ENST00000471496 CTNND2Q9UQB3 1225 aa13.28□□□□□ -0.28
LINC00888-202ENST00000471496 INSL5Q9Y5Q6 135 aa13.28□□□□□ -0.28
LINC00888-202ENST00000471496 GREB1Q4ZG55 1949 aa13.27□□□□□ -0.28
LINC00888-202ENST00000471496 SLC16A3O15427 465 aaKnown RBP13.27□□□□□ -0.29
LINC00888-202ENST00000471496 LRRN2O75325 713 aa13.27□□□□□ -0.29
LINC00888-202ENST00000471496 ATICP31939 592 aa13.27□□□□□ -0.29
LINC00888-202ENST00000471496 GCLMP48507 274 aa13.27□□□□□ -0.29
LINC00888-202ENST00000471496 CDR1P51861 262 aa13.27□□□□□ -0.29
LINC00888-202ENST00000471496 NTHL1P78549 312 aa13.27□□□□□ -0.29
LINC00888-202ENST00000471496 BIRC3Q13489 604 aa13.27□□□□□ -0.29
LINC00888-202ENST00000471496 TRPC3Q13507 836 aa13.27□□□□□ -0.29
LINC00888-202ENST00000471496 WDR72Q3MJ13 1102 aa13.27□□□□□ -0.29
LINC00888-202ENST00000471496 GRASPQ7Z6J2 395 aaPredicted RBP13.27□□□□□ -0.29
LINC00888-202ENST00000471496 ATAD1Q8NBU5 361 aa13.27□□□□□ -0.29
LINC00888-202ENST00000471496 SYAP1Q96A49 352 aaPredicted RBP13.27□□□□□ -0.29
LINC00888-202ENST00000471496 RPGRIP1Q96KN7 1286 aa13.27□□□□□ -0.29
LINC00888-202ENST00000471496 ACBD6Q9BR61 282 aa13.27□□□□□ -0.29
LINC00888-202ENST00000471496 MRPL45Q9BRJ2 306 aaKnown RBP13.27□□□□□ -0.29
LINC00888-202ENST00000471496 HCFC1R1Q9NWW0 138 aa13.27□□□□□ -0.29
LINC00888-202ENST00000471496 DDX43Q9NXZ2 648 aaKnown RBP13.27□□□□□ -0.29
LINC00888-202ENST00000471496 POLIQ9UNA4 740 aa13.27□□□□□ -0.29
LINC00888-202ENST00000471496 CLUHO75153 1309 aa13.27□□□□□ -0.29
LINC00888-202ENST00000471496 C2CD4DB7Z1M9 353 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 TNFRSF10AO00220 468 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 PRRG1O14668 218 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 PHACTR2O75167 634 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 ASS1P00966 412 aaKnown RBP13.26□□□□□ -0.29
LINC00888-202ENST00000471496 HLA-DRAP01903 254 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 EPB41P11171 864 aaKnown RBP13.26□□□□□ -0.29
LINC00888-202ENST00000471496 KRT13P13646 458 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 WARSP23381 471 aaKnown RBP13.26□□□□□ -0.29
LINC00888-202ENST00000471496 SP100P23497 879 aaPredicted RBP13.26□□□□□ -0.29
LINC00888-202ENST00000471496 ACAT1P24752 427 aaKnown RBP13.26□□□□□ -0.29
LINC00888-202ENST00000471496 LMO2P25791 158 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 ELF1P32519 619 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 STX17P56962 302 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 DUSP4Q13115 394 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 PAK1Q13153 545 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 SLC39A12Q504Y0 691 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 RBM43Q6ZSC3 357 aaKnown RBP13.26□□□□□ -0.29
LINC00888-202ENST00000471496 FILIP1Q7Z7B0 1213 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 THEM5Q8N1Q8 247 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 TAS1R2Q8TE23 839 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 CEP63Q96MT8 703 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 SDCBP2Q9H190 292 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 CEP72Q9P209 647 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 DNMT3BQ9UBC3 853 aaKnown RBP13.26□□□□□ -0.29
LINC00888-202ENST00000471496 USTQ9Y2C2 406 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 SLC27A5Q9Y2P5 690 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 R3HCC1Q9Y3T6 440 aaKnown RBP13.26□□□□□ -0.29
LINC00888-202ENST00000471496 YIPF1Q9Y548 306 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 DENND4CQ5VZ89 1909 aa13.26□□□□□ -0.29
LINC00888-202ENST00000471496 NRG2O14511 850 aaPredicted RBP13.25□□□□□ -0.29
LINC00888-202ENST00000471496 ATP2C2O75185 946 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 TACC1O75410 805 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 FAM163BP0C2L3 166 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 GTF2H1P32780 548 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 LHX1P48742 406 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 SGSM1Q2NKQ1 1148 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 ZNF699Q32M78 642 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 DPCR1Q3MIW9 517 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 CBWD6Q4V339 395 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 INTS6LQ5JSJ4 861 aaKnown RBP13.25□□□□□ -0.29
LINC00888-202ENST00000471496 CBWD3Q5JTY5 395 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 CBWD5Q5RIA9 395 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 SPOPLQ6IQ16 392 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 FAM171BQ6P995 826 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 SEMA4DQ92854 862 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 SLC35C1Q96A29 364 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 MMS19Q96T76 1030 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 PI4K2AQ9BTU6 479 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 DNAJC25Q9H1X3 360 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 SMYD3Q9H7B4 428 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 PIDD1Q9HB75 910 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 APOBEC3GQ9HC16 384 aaKnown RBP13.25□□□□□ -0.29
LINC00888-202ENST00000471496 TMEM8AQ9HCN3 771 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 HSFX1Q9UBD0 423 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 NXF1Q9UBU9 619 aaKnown RBP13.25□□□□□ -0.29
LINC00888-202ENST00000471496 OBSL1O75147 1896 aa13.25□□□□□ -0.29
LINC00888-202ENST00000471496 BICDL2A1A5D9 508 aa13.24□□□□□ -0.29
LINC00888-202ENST00000471496 MYBPHLA2RUH7 354 aa13.24□□□□□ -0.29
LINC00888-202ENST00000471496 GOLGA6L22H0YM25 854 aa13.24□□□□□ -0.29
LINC00888-202ENST00000471496 XYLBO75191 536 aa13.24□□□□□ -0.29
LINC00888-202ENST00000471496 SOAT2O75908 522 aa13.24□□□□□ -0.29
LINC00888-202ENST00000471496 SSTR3P32745 418 aaPredicted RBP13.24□□□□□ -0.29
LINC00888-202ENST00000471496 CDH8P55286 799 aa13.24□□□□□ -0.29
LINC00888-202ENST00000471496 TNNC1P63316 161 aa13.24□□□□□ -0.29
LINC00888-202ENST00000471496 MYL7Q01449 175 aa13.24□□□□□ -0.29
LINC00888-202ENST00000471496 TWF1Q12792 350 aa13.24□□□□□ -0.29
LINC00888-202ENST00000471496 KRT39Q6A163 491 aa13.24□□□□□ -0.29
LINC00888-202ENST00000471496 FRMD5Q7Z6J6 570 aa13.24□□□□□ -0.29
LINC00888-202ENST00000471496 RNF135Q8IUD6 432 aa13.24□□□□□ -0.29
LINC00888-202ENST00000471496 MLKLQ8NB16 471 aa13.24□□□□□ -0.29
LINC00888-202ENST00000471496 TAF4BQ92750 862 aa13.24□□□□□ -0.29
LINC00888-202ENST00000471496 MYADMQ96S97 322 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms