RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 RASAL3Q86YV0 1011 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.02□□□□□ -1.77
COPS3-206ENST00000471414 SEMA6DQ8NFY4 1073 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 BRIX1Q8TDN6 353 aaKnown RBP4.02□□□□□ -1.77
COPS3-206ENST00000471414 C1GALT1C1Q96EU7 318 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 CDK5RAP3Q96JB5 506 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 CAMKK2Q96RR4 588 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 CGRRF1Q99675 332 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 FLRT1Q9NZU1 646 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 ST3GAL5Q9UNP4 418 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 SH2B3Q9UQQ2 575 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 STXBP5LQ9Y2K9 1186 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 A0A088AWK7 358 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 DNAJC9-AS1A6NH13 148 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 PDHA1P08559 390 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 ATXN1LP0C7T5 689 aaKnown RBP4.01□□□□□ -1.77
COPS3-206ENST00000471414 PF4V1P10720 104 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 VIPR2P41587 438 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 CCT8P50990 548 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 ARFIP2P53365 341 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 SOX8P57073 446 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 PIN1Q13526 163 aaPredicted RBP4.01□□□□□ -1.77
COPS3-206ENST00000471414 TBCCQ15814 346 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 LONRF3Q496Y0 759 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 PLAC9Q5JTB6 97 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 ICE2Q659A1 982 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 CELF5Q8N6W0 485 aaKnown RBP4.01□□□□□ -1.77
COPS3-206ENST00000471414 FAM46DQ8NEK8 389 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 DIS3LQ8TF46 1054 aaKnown RBP4.01□□□□□ -1.77
COPS3-206ENST00000471414 ATRIPQ8WXE1 791 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 TBC1D5Q92609 795 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 AIFM3Q96NN9 605 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 SLC46A1Q96NT5 459 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 MAP3K14Q99558 947 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 RTFDC1Q9BY42 306 aaPredicted RBP4.01□□□□□ -1.77
COPS3-206ENST00000471414 GABBR1Q9UBS5 961 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 IP6K2Q9UHH9 426 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 PNMA8BQ9ULN7 279 aaPredicted RBP4.01□□□□□ -1.77
COPS3-206ENST00000471414 PLEKHM1Q9Y4G2 1056 aa4.01□□□□□ -1.77
COPS3-206ENST00000471414 E2F8A0AVK6 867 aa4□□□□□ -1.77
COPS3-206ENST00000471414 TARM1B6A8C7 271 aa4□□□□□ -1.77
COPS3-206ENST00000471414 H0YIZ8 118 aa4□□□□□ -1.77
COPS3-206ENST00000471414 H3BML4 177 aa4□□□□□ -1.77
COPS3-206ENST00000471414 H3BUI4 141 aa4□□□□□ -1.77
COPS3-206ENST00000471414 ALDH1L1O75891 902 aa4□□□□□ -1.77
COPS3-206ENST00000471414 TJP3O95049 919 aa4□□□□□ -1.77
COPS3-206ENST00000471414 UNC5CO95185 931 aa4□□□□□ -1.77
COPS3-206ENST00000471414 IL6RP08887 468 aaPredicted RBP4□□□□□ -1.77
COPS3-206ENST00000471414 LIPAP38571 399 aa4□□□□□ -1.77
COPS3-206ENST00000471414 RAB1AP62820 205 aa4□□□□□ -1.77
COPS3-206ENST00000471414 SP2Q02086 613 aa4□□□□□ -1.77
COPS3-206ENST00000471414 ZNF267Q14586 743 aaPredicted RBP4□□□□□ -1.77
COPS3-206ENST00000471414 TTF1Q15361 905 aaPredicted RBP4□□□□□ -1.77
COPS3-206ENST00000471414 ANKRD16Q6P6B7 361 aa4□□□□□ -1.77
COPS3-206ENST00000471414 CAMKK1Q8N5S9 505 aa4□□□□□ -1.77
COPS3-206ENST00000471414 PTDSS2Q9BVG9 487 aa4□□□□□ -1.77
COPS3-206ENST00000471414 DPH1Q9BZG8 443 aa4□□□□□ -1.77
COPS3-206ENST00000471414 ARHGEF3Q9NR81 526 aa4□□□□□ -1.77
COPS3-206ENST00000471414 AASDHPPTQ9NRN7 309 aa4□□□□□ -1.77
COPS3-206ENST00000471414 DDX56Q9NY93 547 aaKnown RBP4□□□□□ -1.77
COPS3-206ENST00000471414 DLL3Q9NYJ7 618 aa4□□□□□ -1.77
COPS3-206ENST00000471414 PADI4Q9UM07 663 aa4□□□□□ -1.77
COPS3-206ENST00000471414 SLC16A3O15427 465 aaKnown RBP3.99□□□□□ -1.77
COPS3-206ENST00000471414 TLR5O60602 858 aa3.99□□□□□ -1.77
COPS3-206ENST00000471414 OFD1O75665 1012 aa3.99□□□□□ -1.77
COPS3-206ENST00000471414 RFPL1O75677 317 aa3.99□□□□□ -1.77
COPS3-206ENST00000471414 ERBB2P04626 1255 aa3.99□□□□□ -1.77
COPS3-206ENST00000471414 HNRNPCP07910 306 aaKnown RBP eCLIP3.99□□□□□ -1.77
COPS3-206ENST00000471414 PDGFRBP09619 1106 aa3.99□□□□□ -1.77
COPS3-206ENST00000471414 EBLN1P0CF75 366 aa3.99□□□□□ -1.77
COPS3-206ENST00000471414 ATXN1P54253 815 aaKnown RBP3.99□□□□□ -1.77
COPS3-206ENST00000471414 WNT3P56703 355 aa3.99□□□□□ -1.77
COPS3-206ENST00000471414 SRSF4Q08170 494 aaKnown RBP3.99□□□□□ -1.77
COPS3-206ENST00000471414 IQCB1Q15051 598 aa3.99□□□□□ -1.77
COPS3-206ENST00000471414 LLGL1Q15334 1064 aa3.99□□□□□ -1.77
COPS3-206ENST00000471414 PROSER3Q2NL68 480 aa3.99□□□□□ -1.77
COPS3-206ENST00000471414 AARS2Q5JTZ9 985 aaKnown RBP3.99□□□□□ -1.77
COPS3-206ENST00000471414 KIAA1614Q5VZ46 1190 aa3.99□□□□□ -1.77
COPS3-206ENST00000471414 ZNF782Q6ZMW2 699 aaPredicted RBP3.99□□□□□ -1.77
COPS3-206ENST00000471414 WDR53Q7Z5U6 358 aaPredicted RBP3.99□□□□□ -1.77
COPS3-206ENST00000471414 TAAR9Q96RI9 348 aa3.99□□□□□ -1.77
COPS3-206ENST00000471414 MESP1Q9BRJ9 268 aa3.99□□□□□ -1.77
COPS3-206ENST00000471414 CDH19Q9H159 772 aa3.99□□□□□ -1.77
COPS3-206ENST00000471414 PCDHA6Q9UN73 950 aa3.99□□□□□ -1.77
COPS3-206ENST00000471414 GABRQQ9UN88 632 aa3.99□□□□□ -1.77
COPS3-206ENST00000471414 A0A087WWL8 130 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 ANKRD62A6NC57 917 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 MYO1FO00160 1098 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 AKAP10O43572 662 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 ONECUT2O95948 504 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 CSF1RP07333 972 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 GRPP07492 148 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 NHLRC4P0CG21 123 aaPredicted RBP3.98□□□□□ -1.77
COPS3-206ENST00000471414 IBSPP21815 317 aaPredicted RBP3.98□□□□□ -1.77
COPS3-206ENST00000471414 PXNP49023 591 aaPredicted RBP3.98□□□□□ -1.77
COPS3-206ENST00000471414 AGFG1P52594 562 aaKnown RBP3.98□□□□□ -1.77
COPS3-206ENST00000471414 LILRA4P59901 499 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 SLC10A2Q12908 348 aaPredicted RBP3.98□□□□□ -1.77
COPS3-206ENST00000471414 FAM153CQ494X1 144 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 KHDC1LQ5JSQ8 128 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms