RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 MRPL45Q9BRJ2 306 aaKnown RBP15.14■□□□□ 0.01
TOP3B-215ENST00000470338 RPP25Q9BUL9 199 aaKnown RBP15.14■□□□□ 0.01
TOP3B-215ENST00000470338 ZNF638Q14966 1978 aaKnown RBP15.13■□□□□ 0.01
TOP3B-215ENST00000470338 NARSO43776 548 aaKnown RBP15.13■□□□□ 0.01
TOP3B-215ENST00000470338 ATP2C2O75185 946 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 PDGFRBP09619 1106 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 CD44P16070 742 aaKnown RBP15.13■□□□□ 0.01
TOP3B-215ENST00000470338 COL9A1P20849 921 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 BMP6P22004 513 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 CCNE1P24864 410 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 PPP1R2P41236 205 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 PMS1P54277 932 aaKnown RBP15.13■□□□□ 0.01
TOP3B-215ENST00000470338 FKBP3Q00688 224 aaKnown RBP15.13■□□□□ 0.01
TOP3B-215ENST00000470338 LRRC63Q05C16 580 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 PPP3CAQ08209 521 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 MORC3Q14149 939 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 ZNF699Q32M78 642 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 CFAP221Q4G0U5 840 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 ZNF667Q5HYK9 610 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 ISM2Q6H9L7 571 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 SHKBP1Q8TBC3 707 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 NUP210Q8TEM1 1887 aaPredicted RBP15.13■□□□□ 0.01
TOP3B-215ENST00000470338 TAF4BQ92750 862 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 DHTKD1Q96HY7 919 aaPredicted RBP15.13■□□□□ 0.01
TOP3B-215ENST00000470338 FUBP3Q96I24 572 aaKnown RBP eCLIP15.13■□□□□ 0.01
TOP3B-215ENST00000470338 TSG101Q99816 390 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 LPIN3Q9BQK8 851 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 SYT15Q9BQS2 421 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 PI4K2AQ9BTU6 479 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 SNX25Q9H3E2 840 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 ZNF334Q9HCZ1 680 aaPredicted RBP15.13■□□□□ 0.01
TOP3B-215ENST00000470338 CRTAC1Q9NQ79 661 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 NXF1Q9UBU9 619 aaKnown RBP15.13■□□□□ 0.01
TOP3B-215ENST00000470338 NME7Q9Y5B8 376 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 ZDBF2Q9HCK1 2354 aa15.13■□□□□ 0.01
TOP3B-215ENST00000470338 KMT2EQ8IZD2 1858 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 ANAPC1Q9H1A4 1944 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 PPP1R3GB7ZBB8 358 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 FGF19O95750 216 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 ASS1P00966 412 aaKnown RBP15.12■□□□□ 0.01
TOP3B-215ENST00000470338 HLA-DRAP01903 254 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 TRIM49P0CI25 452 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 TRIM49CP0CI26 452 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 SRFP11831 508 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 CYP2F1P24903 491 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 GTF2H1P32780 548 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 STIM1Q13586 685 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 VEPH1Q14D04 833 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 MAPRE1Q15691 268 aaKnown RBP15.12■□□□□ 0.01
TOP3B-215ENST00000470338 CCDC142Q17RM4 750 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 GAREM2Q75VX8 874 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 ST13P5Q8NFI4 369 aaPredicted RBP15.12■□□□□ 0.01
TOP3B-215ENST00000470338 OR6B3Q8NGW1 331 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 EEF2KMTQ96G04 330 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 ZSWIM3Q96MP5 696 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 GPR88Q9GZN0 384 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 SLC2A4RGQ9NR83 387 aa15.12■□□□□ 0.01
TOP3B-215ENST00000470338 MYH10P35580 1976 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 TRIM49BA6NDI0 452 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 PSMA7O14818 248 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 SLC16A3O15427 465 aaKnown RBP15.11■□□□□ 0.01
TOP3B-215ENST00000470338 ECI2O75521 394 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 EPB41P11171 864 aaKnown RBP15.11■□□□□ 0.01
TOP3B-215ENST00000470338 HMGA1P17096 107 aaKnown RBP15.11■□□□□ 0.01
TOP3B-215ENST00000470338 GJA1P17302 382 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 MAGEA11P43364 429 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 GCLMP48507 274 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 CDH8P55286 799 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 PSMC1P62191 440 aaKnown RBP15.11■□□□□ 0.01
TOP3B-215ENST00000470338 RPL10AP62906 217 aaKnown RBP15.11■□□□□ 0.01
TOP3B-215ENST00000470338 TEAD2Q15562 447 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 FAM78AQ5JUQ0 283 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 FOXR2Q6PJQ5 311 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 C4orf50Q6ZRC1 276 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 SPATA2LQ8IUW3 424 aaPredicted RBP15.11■□□□□ 0.01
TOP3B-215ENST00000470338 FBXL6Q8N531 539 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 MYCBPAPQ8TBZ2 947 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 FAM200AQ8TCP9 573 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 GIPC2Q8TF65 315 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 ELMO3Q96BJ8 720 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 ASB16Q96NS5 453 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 TRPV4Q9HBA0 871 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 IL21Q9HBE4 155 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 TMEM8AQ9HCN3 771 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 MAGEC2Q9UBF1 373 aaPredicted RBP15.11■□□□□ 0.01
TOP3B-215ENST00000470338 WNT16Q9UBV4 365 aa15.11■□□□□ 0.01
TOP3B-215ENST00000470338 A0A1W2PRU2 124 aa15.1■□□□□ 0.01
TOP3B-215ENST00000470338 A8MXQ7 604 aa15.1■□□□□ 0.01
TOP3B-215ENST00000470338 PDGFBP01127 241 aaPredicted RBP15.1■□□□□ 0.01
TOP3B-215ENST00000470338 P4HA1P13674 534 aa15.1■□□□□ 0.01
TOP3B-215ENST00000470338 PTPN1P18031 435 aaKnown RBP15.1■□□□□ 0.01
TOP3B-215ENST00000470338 FCARP24071 287 aa15.1■□□□□ 0.01
TOP3B-215ENST00000470338 GABRR2P28476 465 aa15.1■□□□□ 0.01
TOP3B-215ENST00000470338 GPR15P49685 360 aa15.1■□□□□ 0.01
TOP3B-215ENST00000470338 DDR2Q16832 855 aa15.1■□□□□ 0.01
TOP3B-215ENST00000470338 KRT39Q6A163 491 aa15.1■□□□□ 0.01
TOP3B-215ENST00000470338 TANGO2Q6ICL3 276 aa15.1■□□□□ 0.01
TOP3B-215ENST00000470338 VSTM1Q6UX27 236 aa15.1■□□□□ 0.01
TOP3B-215ENST00000470338 GPR152Q8TDT2 470 aa15.1■□□□□ 0.01
TOP3B-215ENST00000470338 TAS1R2Q8TE23 839 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms