RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 SLC29A3Q9BZD2 475 aa6.76□□□□□ -1.33
COL11A1-208ENST00000470170 SERTAD3Q9UJW9 196 aa6.76□□□□□ -1.33
COL11A1-208ENST00000470170 LINC01548A6NM66 108 aa6.75□□□□□ -1.33
COL11A1-208ENST00000470170 UNC5CO95185 931 aa6.75□□□□□ -1.33
COL11A1-208ENST00000470170 CELA2AP08217 269 aa6.75□□□□□ -1.33
COL11A1-208ENST00000470170 NDUFB7P17568 137 aa6.75□□□□□ -1.33
COL11A1-208ENST00000470170 SP2Q02086 613 aa6.75□□□□□ -1.33
COL11A1-208ENST00000470170 LONRF3Q496Y0 759 aa6.75□□□□□ -1.33
COL11A1-208ENST00000470170 ZNF618Q5T7W0 954 aa6.75□□□□□ -1.33
COL11A1-208ENST00000470170 TEDDM1Q5T9Z0 273 aa6.75□□□□□ -1.33
COL11A1-208ENST00000470170 EMC10Q5UCC4 262 aa6.75□□□□□ -1.33
COL11A1-208ENST00000470170 ZNF782Q6ZMW2 699 aaPredicted RBP6.75□□□□□ -1.33
COL11A1-208ENST00000470170 GLCCI1Q86VQ1 547 aa6.75□□□□□ -1.33
COL11A1-208ENST00000470170 GRAMD1CQ8IYS0 662 aa6.75□□□□□ -1.33
COL11A1-208ENST00000470170 HPS3Q969F9 1004 aa6.75□□□□□ -1.33
COL11A1-208ENST00000470170 NELL2Q99435 816 aa6.75□□□□□ -1.33
COL11A1-208ENST00000470170 MAP3K14Q99558 947 aa6.75□□□□□ -1.33
COL11A1-208ENST00000470170 ARMT1Q9H993 441 aa6.75□□□□□ -1.33
COL11A1-208ENST00000470170 TCF7L1Q9HCS4 588 aa6.75□□□□□ -1.33
COL11A1-208ENST00000470170 TARM1B6A8C7 271 aa6.74□□□□□ -1.33
COL11A1-208ENST00000470170 LIPAP38571 399 aa6.74□□□□□ -1.33
COL11A1-208ENST00000470170 KCNJ5P48544 419 aa6.74□□□□□ -1.33
COL11A1-208ENST00000470170 LOXL3P58215 753 aa6.74□□□□□ -1.33
COL11A1-208ENST00000470170 LILRA4P59901 499 aa6.74□□□□□ -1.33
COL11A1-208ENST00000470170 KHDC1LQ5JSQ8 128 aa6.74□□□□□ -1.33
COL11A1-208ENST00000470170 ICE2Q659A1 982 aa6.74□□□□□ -1.33
COL11A1-208ENST00000470170 SUMO4Q6EEV6 95 aa6.74□□□□□ -1.33
COL11A1-208ENST00000470170 LAYNQ6UX15 382 aa6.74□□□□□ -1.33
COL11A1-208ENST00000470170 CDK5RAP3Q96JB5 506 aa6.74□□□□□ -1.33
COL11A1-208ENST00000470170 NUP88Q99567 741 aaPredicted RBP6.74□□□□□ -1.33
COL11A1-208ENST00000470170 CGRRF1Q99675 332 aa6.74□□□□□ -1.33
COL11A1-208ENST00000470170 ATXN1LP0C7T5 689 aaKnown RBP6.73□□□□□ -1.33
COL11A1-208ENST00000470170 PXNP49023 591 aaPredicted RBP6.73□□□□□ -1.33
COL11A1-208ENST00000470170 ZNF267Q14586 743 aaPredicted RBP6.73□□□□□ -1.33
COL11A1-208ENST00000470170 TREML2Q5T2D2 321 aa6.73□□□□□ -1.33
COL11A1-208ENST00000470170 ARHGAP40Q5TG30 622 aa6.73□□□□□ -1.33
COL11A1-208ENST00000470170 SFRP4Q6FHJ7 346 aaPredicted RBP6.73□□□□□ -1.33
COL11A1-208ENST00000470170 DTX2Q86UW9 622 aa6.73□□□□□ -1.33
COL11A1-208ENST00000470170 SEMA6DQ8NFY4 1073 aa6.73□□□□□ -1.33
COL11A1-208ENST00000470170 PLBD2Q8NHP8 589 aa6.73□□□□□ -1.33
COL11A1-208ENST00000470170 ZNF778Q96MU6 729 aa6.73□□□□□ -1.33
COL11A1-208ENST00000470170 BRINP2Q9C0B6 783 aa6.73□□□□□ -1.33
COL11A1-208ENST00000470170 SARS2Q9NP81 518 aaKnown RBP6.73□□□□□ -1.33
COL11A1-208ENST00000470170 SH3BP4Q9P0V3 963 aa6.73□□□□□ -1.33
COL11A1-208ENST00000470170 SSX2IPQ9Y2D8 614 aa6.73□□□□□ -1.33
COL11A1-208ENST00000470170 ANKRD6Q9Y2G4 727 aa6.73□□□□□ -1.33
COL11A1-208ENST00000470170 STXBP5LQ9Y2K9 1186 aa6.73□□□□□ -1.33
COL11A1-208ENST00000470170 NOP58Q9Y2X3 529 aaKnown RBP6.73□□□□□ -1.33
COL11A1-208ENST00000470170 WDR91A4D1P6 747 aa6.72□□□□□ -1.33
COL11A1-208ENST00000470170 H0YIZ8 118 aa6.72□□□□□ -1.33
COL11A1-208ENST00000470170 ZNF213O14771 459 aa6.72□□□□□ -1.33
COL11A1-208ENST00000470170 ERBB2P04626 1255 aa6.72□□□□□ -1.33
COL11A1-208ENST00000470170 GRPP07492 148 aa6.72□□□□□ -1.33
COL11A1-208ENST00000470170 IL6RP08887 468 aaPredicted RBP6.72□□□□□ -1.33
COL11A1-208ENST00000470170 FAM163BP0C2L3 166 aa6.72□□□□□ -1.33
COL11A1-208ENST00000470170 VCAM1P19320 739 aa6.72□□□□□ -1.33
COL11A1-208ENST00000470170 IBSPP21815 317 aaPredicted RBP6.72□□□□□ -1.33
COL11A1-208ENST00000470170 ALDH9A1P49189 494 aa6.72□□□□□ -1.33
COL11A1-208ENST00000470170 KRTAP10-11P60412 298 aa6.72□□□□□ -1.33
COL11A1-208ENST00000470170 SLC10A2Q12908 348 aaPredicted RBP6.72□□□□□ -1.33
COL11A1-208ENST00000470170 IQCB1Q15051 598 aa6.72□□□□□ -1.33
COL11A1-208ENST00000470170 LLGL1Q15334 1064 aa6.72□□□□□ -1.33
COL11A1-208ENST00000470170 ATAT1Q5SQI0 421 aa6.72□□□□□ -1.33
COL11A1-208ENST00000470170 CEP85Q6P2H3 762 aa6.72□□□□□ -1.33
COL11A1-208ENST00000470170 CPA4Q9UI42 421 aa6.72□□□□□ -1.33
COL11A1-208ENST00000470170 PLEKHM1Q9Y4G2 1056 aa6.72□□□□□ -1.33
COL11A1-208ENST00000470170 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.72□□□□□ -1.33
COL11A1-208ENST00000470170 SLC16A3O15427 465 aaKnown RBP6.71□□□□□ -1.34
COL11A1-208ENST00000470170 TLR5O60602 858 aa6.71□□□□□ -1.34
COL11A1-208ENST00000470170 OFD1O75665 1012 aa6.71□□□□□ -1.34
COL11A1-208ENST00000470170 ABLIM3O94929 683 aa6.71□□□□□ -1.34
COL11A1-208ENST00000470170 CT47B1P0C2W7 299 aaPredicted RBP6.71□□□□□ -1.34
COL11A1-208ENST00000470170 NHLRC4P0CG21 123 aaPredicted RBP6.71□□□□□ -1.34
COL11A1-208ENST00000470170 CYP2C18P33260 490 aa6.71□□□□□ -1.34
COL11A1-208ENST00000470170 ZNF81P51508 661 aa6.71□□□□□ -1.34
COL11A1-208ENST00000470170 GRM1Q13255 1194 aa6.71□□□□□ -1.34
COL11A1-208ENST00000470170 EZH2Q15910 746 aaKnown RBP6.71□□□□□ -1.34
COL11A1-208ENST00000470170 SRSF7Q16629 238 aaKnown RBP eCLIP6.71□□□□□ -1.34
COL11A1-208ENST00000470170 IFIT1BQ5T764 474 aaKnown RBP6.71□□□□□ -1.34
COL11A1-208ENST00000470170 RGS7BPQ6MZT1 257 aaPredicted RBP6.71□□□□□ -1.34
COL11A1-208ENST00000470170 ANKRD16Q6P6B7 361 aa6.71□□□□□ -1.34
COL11A1-208ENST00000470170 SLC29A4Q7RTT9 530 aa6.71□□□□□ -1.34
COL11A1-208ENST00000470170 VGLL2Q8N8G2 317 aa6.71□□□□□ -1.34
COL11A1-208ENST00000470170 ATG4AQ8WYN0 398 aa6.71□□□□□ -1.34
COL11A1-208ENST00000470170 SMG7Q92540 1137 aaKnown RBP6.71□□□□□ -1.34
COL11A1-208ENST00000470170 REPS1Q96D71 796 aa6.71□□□□□ -1.34
COL11A1-208ENST00000470170 MTFMTQ96DP5 389 aaKnown RBP6.71□□□□□ -1.34
COL11A1-208ENST00000470170 PTDSS2Q9BVG9 487 aa6.71□□□□□ -1.34
COL11A1-208ENST00000470170 SLC12A5Q9H2X9 1139 aa6.71□□□□□ -1.34
COL11A1-208ENST00000470170 DLL3Q9NYJ7 618 aa6.71□□□□□ -1.34
COL11A1-208ENST00000470170 FLRT1Q9NZU1 646 aa6.71□□□□□ -1.34
COL11A1-208ENST00000470170 STAP2Q9UGK3 403 aa6.71□□□□□ -1.34
COL11A1-208ENST00000470170 SETD1BQ9UPS6 1966 aaKnown RBP6.71□□□□□ -1.34
COL11A1-208ENST00000470170 FESP07332 822 aa6.7□□□□□ -1.34
COL11A1-208ENST00000470170 PPIFP30405 207 aaKnown RBP6.7□□□□□ -1.34
COL11A1-208ENST00000470170 AMOTQ4VCS5 1084 aa6.7□□□□□ -1.34
COL11A1-208ENST00000470170 KIAA1614Q5VZ46 1190 aa6.7□□□□□ -1.34
COL11A1-208ENST00000470170 C1QL2Q7Z5L3 287 aa6.7□□□□□ -1.34
COL11A1-208ENST00000470170 FANCBQ8NB91 859 aa6.7□□□□□ -1.34
COL11A1-208ENST00000470170 TBC1D5Q92609 795 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms