RNA–Protein interactions for RNA: ENST00000470038.1

SNAP47-206, Transcript of synaptosome associated protein 47, humanhuman

TSL 3

Gene SNAP47, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-206ENST00000470038 KCNA1Q09470 495 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 GRSF1Q12849 480 aaKnown RBP eCLIP17.42■□□□□ 0.38
SNAP47-206ENST00000470038 RUNX3Q13761 415 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 CSRP2Q16527 193 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 NFE2Q16621 373 aaPredicted RBP17.42■□□□□ 0.38
SNAP47-206ENST00000470038 SDHAF4Q5VUM1 108 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 RRAGBQ5VZM2 374 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 TXNDC8Q6A555 127 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 TRIM68Q6AZZ1 485 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 TMEM150AQ86TG1 271 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 WDR5BQ86VZ2 330 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 FAM160A2Q8N612 972 aaPredicted RBP17.42■□□□□ 0.38
SNAP47-206ENST00000470038 NOC3LQ8WTT2 800 aaKnown RBP17.42■□□□□ 0.38
SNAP47-206ENST00000470038 MRPS31Q92665 395 aaKnown RBP17.42■□□□□ 0.38
SNAP47-206ENST00000470038 USP13Q92995 863 aaPredicted RBP17.42■□□□□ 0.38
SNAP47-206ENST00000470038 SAAL1Q96ER3 474 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 ACCSQ96QU6 501 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 FAM83CQ9BQN1 747 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 EBF3Q9H4W6 596 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 TDP1Q9NUW8 608 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 SEL1LQ9UBV2 794 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 STK17AQ9UEE5 414 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 CLIC4Q9Y696 253 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 MYMKA6NI61 221 aa17.41■□□□□ 0.38
SNAP47-206ENST00000470038 SLC30A4O14863 429 aa17.41■□□□□ 0.38
SNAP47-206ENST00000470038 HUS1O60921 280 aa17.41■□□□□ 0.38
SNAP47-206ENST00000470038 PPP1R37O75864 691 aa17.41■□□□□ 0.38
SNAP47-206ENST00000470038 GCNT3O95395 438 aa17.41■□□□□ 0.38
SNAP47-206ENST00000470038 ITGB3P05106 788 aa17.41■□□□□ 0.38
SNAP47-206ENST00000470038 GAP43P17677 238 aa17.41■□□□□ 0.38
SNAP47-206ENST00000470038 HOXA6P31267 233 aa17.41■□□□□ 0.38
SNAP47-206ENST00000470038 PXNP49023 591 aaPredicted RBP17.41■□□□□ 0.38
SNAP47-206ENST00000470038 WNT7BP56706 349 aa17.41■□□□□ 0.38
SNAP47-206ENST00000470038 L1TD1Q5T7N2 865 aaKnown RBP17.41■□□□□ 0.38
SNAP47-206ENST00000470038 CC2D1AQ6P1N0 951 aaPredicted RBP17.41■□□□□ 0.38
SNAP47-206ENST00000470038 PKN3Q6P5Z2 889 aa17.41■□□□□ 0.38
SNAP47-206ENST00000470038 SV2BQ7L1I2 683 aa17.41■□□□□ 0.38
SNAP47-206ENST00000470038 SYCP3Q8IZU3 236 aa17.41■□□□□ 0.38
SNAP47-206ENST00000470038 PDCL2Q8N4E4 241 aa17.41■□□□□ 0.38
SNAP47-206ENST00000470038 TTC16Q8NEE8 873 aa17.41■□□□□ 0.38
SNAP47-206ENST00000470038 CACTINQ8WUQ7 758 aaKnown RBP17.41■□□□□ 0.38
SNAP47-206ENST00000470038 HPS4Q9NQG7 708 aa17.41■□□□□ 0.38
SNAP47-206ENST00000470038 RALGAPA1Q6GYQ0 2036 aa17.41■□□□□ 0.38
SNAP47-206ENST00000470038 KIF26AQ9ULI4 1882 aaPredicted RBP17.41■□□□□ 0.38
SNAP47-206ENST00000470038 AXIN1O15169 862 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 GDF9O60383 454 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 IDEP14735 1019 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 ACAT1P24752 427 aaKnown RBP17.4■□□□□ 0.38
SNAP47-206ENST00000470038 TXLNAP40222 546 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 RPL10AP62906 217 aaKnown RBP17.4■□□□□ 0.38
SNAP47-206ENST00000470038 AMPD2Q01433 879 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 MYL7Q01449 175 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 DDR2Q16832 855 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 TMEM196Q5HYL7 178 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 FSTL4Q6MZW2 842 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 MON1AQ86VX9 555 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 BRSK2Q8IWQ3 736 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 C1orf127Q8N9H9 656 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 ZSWIM2Q8NEG5 633 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 ACBD6Q9BR61 282 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 STRA6Q9BX79 667 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 KIF9Q9HAQ2 790 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 DDX43Q9NXZ2 648 aaKnown RBP17.4■□□□□ 0.38
SNAP47-206ENST00000470038 RBAKQ9NYW8 714 aaPredicted RBP17.4■□□□□ 0.38
SNAP47-206ENST00000470038 L1RE1Q9UN81 338 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 SLC8A2Q9UPR5 921 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 PCDHB13Q9Y5F0 798 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 CNOT1A5YKK6 2376 aaKnown RBP17.4■□□□□ 0.38
SNAP47-206ENST00000470038 ATG2BQ96BY7 2078 aa17.4■□□□□ 0.38
SNAP47-206ENST00000470038 ZNF638Q14966 1978 aaKnown RBP17.39■□□□□ 0.37
SNAP47-206ENST00000470038 GOLGA8IPA6NC78 632 aa17.39■□□□□ 0.37
SNAP47-206ENST00000470038 OTOL1A6NHN0 477 aaPredicted RBP17.39■□□□□ 0.37
SNAP47-206ENST00000470038 GOLGA8JA6NMD2 632 aa17.39■□□□□ 0.37
SNAP47-206ENST00000470038 TRDMT1O14717 391 aaKnown RBP17.39■□□□□ 0.37
SNAP47-206ENST00000470038 ATG13O75143 517 aa17.39■□□□□ 0.37
SNAP47-206ENST00000470038 LDHAP00338 332 aaKnown RBP17.39■□□□□ 0.37
SNAP47-206ENST00000470038 KRT19P08727 400 aa17.39■□□□□ 0.37
SNAP47-206ENST00000470038 ARSAP15289 507 aa17.39■□□□□ 0.37
SNAP47-206ENST00000470038 KCNA4P22459 653 aa17.39■□□□□ 0.37
SNAP47-206ENST00000470038 CYP2F1P24903 491 aa17.39■□□□□ 0.37
SNAP47-206ENST00000470038 CEBPZQ03701 1054 aaKnown RBP17.39■□□□□ 0.37
SNAP47-206ENST00000470038 PPM1JQ5JR12 505 aa17.39■□□□□ 0.37
SNAP47-206ENST00000470038 CSGALNACT2Q8N6G5 542 aa17.39■□□□□ 0.37
SNAP47-206ENST00000470038 DNAJC19Q96DA6 116 aa17.39■□□□□ 0.37
SNAP47-206ENST00000470038 FAM84AQ96KN4 292 aa17.39■□□□□ 0.37
SNAP47-206ENST00000470038 CLIC6Q96NY7 704 aa17.39■□□□□ 0.37
SNAP47-206ENST00000470038 TRPC7Q9HCX4 862 aa17.39■□□□□ 0.37
SNAP47-206ENST00000470038 UXTQ9UBK9 157 aaPredicted RBP17.39■□□□□ 0.37
SNAP47-206ENST00000470038 FBXO2Q9UK22 296 aaPredicted RBP17.39■□□□□ 0.37
SNAP47-206ENST00000470038 GTF3C4Q9UKN8 822 aa17.39■□□□□ 0.37
SNAP47-206ENST00000470038 SRPRBQ9Y5M8 271 aaKnown RBP17.39■□□□□ 0.37
SNAP47-206ENST00000470038 SNX9Q9Y5X1 595 aa17.39■□□□□ 0.37
SNAP47-206ENST00000470038 CHD8Q9HCK8 2581 aa17.38■□□□□ 0.37
SNAP47-206ENST00000470038 SOBPA7XYQ1 873 aa17.38■□□□□ 0.37
SNAP47-206ENST00000470038 FOXD2O60548 495 aaPredicted RBP17.38■□□□□ 0.37
SNAP47-206ENST00000470038 RNF40O75150 1001 aa17.38■□□□□ 0.37
SNAP47-206ENST00000470038 RPP40O75818 363 aaKnown RBP17.38■□□□□ 0.37
SNAP47-206ENST00000470038 EGFP01133 1207 aa17.38■□□□□ 0.37
SNAP47-206ENST00000470038 ADRB1P08588 477 aa17.38■□□□□ 0.37
SNAP47-206ENST00000470038 CCDC192P0DO97 292 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms