RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 ATXN3LQ9H3M9 355 aa19.59■□□□□ 0.73
PHGDH-204ENST00000469443 ABCB6Q9NP58 842 aa19.59■□□□□ 0.73
PHGDH-204ENST00000469443 GTF3C4Q9UKN8 822 aa19.59■□□□□ 0.73
PHGDH-204ENST00000469443 HCRTO43612 131 aa19.58■□□□□ 0.72
PHGDH-204ENST00000469443 CALUO43852 315 aaPredicted RBP19.58■□□□□ 0.72
PHGDH-204ENST00000469443 STAU1O95793 577 aaKnown RBP19.58■□□□□ 0.72
PHGDH-204ENST00000469443 NR3C1P04150 777 aa19.58■□□□□ 0.72
PHGDH-204ENST00000469443 WARSP23381 471 aaKnown RBP19.58■□□□□ 0.72
PHGDH-204ENST00000469443 HOXD11P31277 338 aaPredicted RBP19.58■□□□□ 0.72
PHGDH-204ENST00000469443 CASP4P49662 377 aa19.58■□□□□ 0.72
PHGDH-204ENST00000469443 AP3M2P53677 418 aa19.58■□□□□ 0.72
PHGDH-204ENST00000469443 PRKCQQ04759 706 aa19.58■□□□□ 0.72
PHGDH-204ENST00000469443 TRPC3Q13507 836 aa19.58■□□□□ 0.72
PHGDH-204ENST00000469443 SNW1Q13573 536 aaKnown RBP19.58■□□□□ 0.72
PHGDH-204ENST00000469443 GRM2Q14416 872 aa19.58■□□□□ 0.72
PHGDH-204ENST00000469443 TAF12Q16514 161 aa19.58■□□□□ 0.72
PHGDH-204ENST00000469443 SLC44A4Q53GD3 710 aa19.58■□□□□ 0.72
PHGDH-204ENST00000469443 ARHGAP15Q53QZ3 475 aa19.58■□□□□ 0.72
PHGDH-204ENST00000469443 VITQ6UXI7 678 aa19.58■□□□□ 0.72
PHGDH-204ENST00000469443 PARD3BQ8TEW8 1205 aa19.58■□□□□ 0.72
PHGDH-204ENST00000469443 MMS19Q96T76 1030 aa19.58■□□□□ 0.72
PHGDH-204ENST00000469443 SYT15Q9BQS2 421 aa19.58■□□□□ 0.72
PHGDH-204ENST00000469443 IL21Q9HBE4 155 aa19.58■□□□□ 0.72
PHGDH-204ENST00000469443 TRAF3IP3Q9Y228 551 aa19.58■□□□□ 0.72
PHGDH-204ENST00000469443 MYH10P35580 1976 aa19.57■□□□□ 0.72
PHGDH-204ENST00000469443 KIF26AQ9ULI4 1882 aaPredicted RBP19.57■□□□□ 0.72
PHGDH-204ENST00000469443 GOLGA6L4A6NEF3 574 aa19.57■□□□□ 0.72
PHGDH-204ENST00000469443 LRRIQ3A6PVS8 624 aaPredicted RBP19.57■□□□□ 0.72
PHGDH-204ENST00000469443 FAM163BP0C2L3 166 aa19.57■□□□□ 0.72
PHGDH-204ENST00000469443 CDC25CP30307 473 aa19.57■□□□□ 0.72
PHGDH-204ENST00000469443 VIPR2P41587 438 aa19.57■□□□□ 0.72
PHGDH-204ENST00000469443 CLDN10P78369 228 aa19.57■□□□□ 0.72
PHGDH-204ENST00000469443 STXBP5Q5T5C0 1151 aa19.57■□□□□ 0.72
PHGDH-204ENST00000469443 FAM171BQ6P995 826 aa19.57■□□□□ 0.72
PHGDH-204ENST00000469443 CCDC105Q8IYK2 499 aa19.57■□□□□ 0.72
PHGDH-204ENST00000469443 FMR1NBQ8N0W7 255 aaPredicted RBP19.57■□□□□ 0.72
PHGDH-204ENST00000469443 DEPDC1BQ8WUY9 529 aa19.57■□□□□ 0.72
PHGDH-204ENST00000469443 DNASE1L2Q92874 299 aa19.57■□□□□ 0.72
PHGDH-204ENST00000469443 E2F7Q96AV8 911 aa19.57■□□□□ 0.72
PHGDH-204ENST00000469443 FUBP3Q96I24 572 aaKnown RBP eCLIP19.57■□□□□ 0.72
PHGDH-204ENST00000469443 GCNAQ96QF7 691 aa19.57■□□□□ 0.72
PHGDH-204ENST00000469443 MKNK1Q9BUB5 465 aa19.57■□□□□ 0.72
PHGDH-204ENST00000469443 TRMT61BQ9BVS5 477 aaKnown RBP19.57■□□□□ 0.72
PHGDH-204ENST00000469443 CDH9Q9ULB4 789 aa19.57■□□□□ 0.72
PHGDH-204ENST00000469443 PATJQ8NI35 1801 aa19.57■□□□□ 0.72
PHGDH-204ENST00000469443 F5P12259 2224 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 MYBPHLA2RUH7 354 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 H0Y858 1186 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 PHACTR2O75167 634 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 PSMC3P17980 439 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 CYP2F1P24903 491 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 LMO2P25791 158 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 ATICP31939 592 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 GPR15P49685 360 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 MYL6P60660 151 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 RPL10AP62906 217 aaKnown RBP19.56■□□□□ 0.72
PHGDH-204ENST00000469443 TNNC1P63316 161 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 NFIL3Q16649 462 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 CCDC142Q17RM4 750 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 WDR72Q3MJ13 1102 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 CFAP221Q4G0U5 840 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 GPR158Q5T848 1215 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 CEP135Q66GS9 1140 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 SPATA2LQ8IUW3 424 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-204ENST00000469443 MFSD6LQ8IWD5 586 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 GUF1Q8N442 669 aaKnown RBP19.56■□□□□ 0.72
PHGDH-204ENST00000469443 DTWD2Q8NBA8 298 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 SYAP1Q96A49 352 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-204ENST00000469443 DDX23Q9BUQ8 820 aaKnown RBP19.56■□□□□ 0.72
PHGDH-204ENST00000469443 XYLT2Q9H1B5 865 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 BRD9Q9H8M2 597 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 MAPK8IP1Q9UQF2 711 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 FRMD4BQ9Y2L6 1034 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 SIT1Q9Y3P8 196 aa19.56■□□□□ 0.72
PHGDH-204ENST00000469443 NCANO14594 1321 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 CACNA1IQ9P0X4 2223 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 KANSL1LA0AUZ9 987 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 HEPACAM2A8MVW5 462 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 ATP2C2O75185 946 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 TACC1O75410 805 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 C4BPAP04003 597 aaKnown RBP19.55■□□□□ 0.72
PHGDH-204ENST00000469443 PDGFRBP09619 1106 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 CSH1P0DML2 217 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 CSH2P0DML3 217 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 HMGA1P17096 107 aaKnown RBP19.55■□□□□ 0.72
PHGDH-204ENST00000469443 GDI1P31150 447 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 CYP4F8P98187 520 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 BIRC3Q13489 604 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 MAPRE1Q15691 268 aaKnown RBP19.55■□□□□ 0.72
PHGDH-204ENST00000469443 DDR2Q16832 855 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 TDRD10Q5VZ19 366 aaKnown RBP19.55■□□□□ 0.72
PHGDH-204ENST00000469443 C4orf50Q6ZRC1 276 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 ARID3BQ8IVW6 561 aaPredicted RBP19.55■□□□□ 0.72
PHGDH-204ENST00000469443 PJA1Q8NG27 643 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 TMC2Q8TDI7 906 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 IRF7Q92985 503 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 MRPL45Q9BRJ2 306 aaKnown RBP19.55■□□□□ 0.72
PHGDH-204ENST00000469443 FOXQ1Q9C009 403 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 SNX25Q9H3E2 840 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 TASP1Q9H6P5 420 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms