RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 ZNF395Q9H8N7 513 aaPredicted RBP12.71□□□□□ -0.37
VARS2-205ENST00000469358 QTRT2Q9H974 415 aaKnown RBP12.71□□□□□ -0.37
VARS2-205ENST00000469358 CYP39A1Q9NYL5 469 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 ARHGAP28Q9P2N2 729 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 AGTPBP1Q9UPW5 1226 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 CST8O60676 142 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 GARTP22102 1010 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 RFC1P35251 1148 aaPredicted RBP12.71□□□□□ -0.37
VARS2-205ENST00000469358 MYL6P60660 151 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 OSTNP61366 133 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 SP2Q02086 613 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 CCDC15Q0P6D6 951 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 SEPT7Q16181 437 aaKnown RBP12.71□□□□□ -0.37
VARS2-205ENST00000469358 RAB6CQ53S08 254 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 PRAMEF18Q5VWM3 479 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 ANO7Q6IWH7 933 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 GPAT2Q6NUI2 795 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 CENPUQ71F23 418 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 PHF13Q86YI8 300 aaPredicted RBP12.71□□□□□ -0.37
VARS2-205ENST00000469358 RELL1Q8IUW5 271 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 UNC45BQ8IWX7 931 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 RCOR2Q8IZ40 523 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 LARGE2Q8N3Y3 721 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 WDTC1Q8N5D0 677 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 CPT1BQ92523 772 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 AKT1S1Q96B36 256 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 RAB6CQ9H0N0 254 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 RPAP3Q9H6T3 665 aaPredicted RBP12.71□□□□□ -0.37
VARS2-205ENST00000469358 RNF146Q9NTX7 359 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 PSMC3IPQ9P2W1 217 aaPredicted RBP12.71□□□□□ -0.37
VARS2-205ENST00000469358 HEY2Q9UBP5 337 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 IP6K2Q9UHH9 426 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 LINGO3P0C6S8 592 aa12.71□□□□□ -0.38
VARS2-205ENST00000469358 ALDH3A1P30838 453 aa12.71□□□□□ -0.38
VARS2-205ENST00000469358 CDKN2BP42772 138 aa12.71□□□□□ -0.38
VARS2-205ENST00000469358 BPIFB4P59827 614 aa12.71□□□□□ -0.38
VARS2-205ENST00000469358 KRT27Q7Z3Y8 459 aa12.71□□□□□ -0.38
VARS2-205ENST00000469358 ARFGAP1Q8N6T3 406 aa12.71□□□□□ -0.38
VARS2-205ENST00000469358 FAM71DQ8N9W8 422 aa12.71□□□□□ -0.38
VARS2-205ENST00000469358 TTC17Q96AE7 1141 aa12.71□□□□□ -0.38
VARS2-205ENST00000469358 MTMR12Q9C0I1 747 aa12.71□□□□□ -0.38
VARS2-205ENST00000469358 SYNPO2Q9UMS6 1093 aa12.71□□□□□ -0.38
VARS2-205ENST00000469358 DOCK5Q9H7D0 1870 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 DPPA5A6NC42 116 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 SPDYE5A6NIY4 337 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 KCNA2P16389 499 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 ATP4AP20648 1035 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 SERPINB3P29508 390 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 SFNP31947 248 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 SKIV2L2P42285 1042 aaKnown RBP12.7□□□□□ -0.38
VARS2-205ENST00000469358 GEMIN4P57678 1058 aaKnown RBP12.7□□□□□ -0.38
VARS2-205ENST00000469358 ACTR2P61160 394 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 EMC2Q15006 297 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 ZNF677Q86XU0 584 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 TRIM56Q9BRZ2 755 aaKnown RBP12.7□□□□□ -0.38
VARS2-205ENST00000469358 CADM1Q9BY67 442 aaKnown RBP12.7□□□□□ -0.38
VARS2-205ENST00000469358 DEFB129Q9H1M3 183 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 K7ERI5 159 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 KRT36O76013 467 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 NEFHP12036 1026 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 RPL22P35268 128 aaKnown RBP12.7□□□□□ -0.38
VARS2-205ENST00000469358 RAP1GAPP47736 663 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 BASP1P80723 227 aaKnown RBP12.7□□□□□ -0.38
VARS2-205ENST00000469358 BLMHQ13867 455 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 CTC1Q2NKJ3 1217 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 TFDP3Q5H9I0 405 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 NPNTQ6UXI9 565 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 AGGF1Q8N302 714 aaeCLIP12.7□□□□□ -0.38
VARS2-205ENST00000469358 ZNF276Q8N554 614 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 UCMAQ8WVF2 138 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 PDLIM7Q9NR12 457 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 ZNRF3Q9ULT6 936 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 SCINQ9Y6U3 715 aa12.7□□□□□ -0.38
VARS2-205ENST00000469358 ONECUT3O60422 494 aaPredicted RBP12.69□□□□□ -0.38
VARS2-205ENST00000469358 PLA2G6O60733 806 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 DGAT1O75907 488 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 DCTN3O75935 186 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 APBA3O96018 575 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 MORF4L2Q15014 288 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 VSIG10LQ86VR7 867 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 FBXO27Q8NI29 283 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 RBM41Q96IZ5 413 aaKnown RBP12.69□□□□□ -0.38
VARS2-205ENST00000469358 SERAC1Q96JX3 654 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 FAM111AQ96PZ2 611 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 TCHPQ9BT92 498 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 TIPINQ9BVW5 301 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 JPH1Q9HDC5 661 aaPredicted RBP12.69□□□□□ -0.38
VARS2-205ENST00000469358 CYLDQ9NQC7 956 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 SMG5Q9UPR3 1016 aaKnown RBP12.69□□□□□ -0.38
VARS2-205ENST00000469358 E5RJQ4 531 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 ZC3H11AO75152 810 aaKnown RBP eCLIP12.69□□□□□ -0.387e-22■■■■■ 33.3
VARS2-205ENST00000469358 POTEJP0CG39 1038 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 BGNP21810 368 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 C1QBPQ07021 282 aaKnown RBP12.69□□□□□ -0.38
VARS2-205ENST00000469358 SMAD1Q15797 465 aaKnown RBP12.69□□□□□ -0.38
VARS2-205ENST00000469358 PARP6Q2NL67 630 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 DPH6Q7L8W6 267 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 ZC3H18Q86VM9 953 aaKnown RBP12.69□□□□□ -0.38
VARS2-205ENST00000469358 RIBC1Q8N443 379 aaPredicted RBP12.69□□□□□ -0.38
VARS2-205ENST00000469358 WDR60Q8WVS4 1066 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms