RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 YARSP54577 528 aaKnown RBP13.75□□□□□ -0.21
HDAC6-217ENST00000469223 EXOSC10Q01780 885 aaKnown RBP13.75□□□□□ -0.21
HDAC6-217ENST00000469223 KCNC4Q03721 635 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 SRSF1Q07955 248 aaKnown RBP eCLIP13.75□□□□□ -0.21
HDAC6-217ENST00000469223 GPR17Q13304 367 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 CAMK2BQ13554 666 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 MTF1Q14872 753 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 ATF7IP2Q5U623 682 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 RNF20Q5VTR2 975 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 PCSK4Q6UW60 755 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 POTEDQ86YR6 584 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 TMEM130Q8N3G9 435 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 ALLCQ8N6M5 410 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 CCDC26Q8TAB7 109 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 HAS1Q92839 578 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 SEPT5Q99719 369 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-217ENST00000469223 ANO2Q9NQ90 1003 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 ANKEF1Q9NU02 776 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 TDP1Q9NUW8 608 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 TOR4AQ9NXH8 423 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 WNT6Q9Y6F9 365 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 TP53BP1Q12888 1972 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-217ENST00000469223 MYLKQ15746 1914 aa13.74□□□□□ -0.21
HDAC6-217ENST00000469223 A0A087WWV3 80 aa13.74□□□□□ -0.21
HDAC6-217ENST00000469223 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-217ENST00000469223 GOLGA8CPA6NN73 597 aa13.74□□□□□ -0.21
HDAC6-217ENST00000469223 K7EQS6 105 aa13.74□□□□□ -0.21
HDAC6-217ENST00000469223 M0R2N6 131 aa13.74□□□□□ -0.21
HDAC6-217ENST00000469223 EPB41L2O43491 1005 aaKnown RBP13.74□□□□□ -0.21
HDAC6-217ENST00000469223 SLITRK3O94933 977 aa13.74□□□□□ -0.21
HDAC6-217ENST00000469223 LARGE1O95461 756 aa13.74□□□□□ -0.21
HDAC6-217ENST00000469223 KLF8O95600 359 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-217ENST00000469223 ATF6P18850 670 aa13.74□□□□□ -0.21
HDAC6-217ENST00000469223 RPL9P32969 192 aaKnown RBP13.74□□□□□ -0.21
HDAC6-217ENST00000469223 VEPH1Q14D04 833 aa13.74□□□□□ -0.21
HDAC6-217ENST00000469223 NECTIN1Q15223 517 aa13.74□□□□□ -0.21
HDAC6-217ENST00000469223 XKR4Q5GH76 650 aa13.74□□□□□ -0.21
HDAC6-217ENST00000469223 PGBD3Q8N328 593 aa13.74□□□□□ -0.21
HDAC6-217ENST00000469223 PIGOQ8TEQ8 1089 aa13.74□□□□□ -0.21
HDAC6-217ENST00000469223 ATP2A3Q93084 1043 aa13.74□□□□□ -0.21
HDAC6-217ENST00000469223 EIF2AK1Q9BQI3 630 aaKnown RBP13.74□□□□□ -0.21
HDAC6-217ENST00000469223 KIFC3Q9BVG8 833 aa13.74□□□□□ -0.21
HDAC6-217ENST00000469223 CCDC94Q9BW85 323 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-217ENST00000469223 RNF26Q9BY78 433 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-217ENST00000469223 DUS2Q9NX74 493 aaKnown RBP13.74□□□□□ -0.21
HDAC6-217ENST00000469223 KIAA1522Q9P206 1035 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-217ENST00000469223 TUBGCP4Q9UGJ1 667 aa13.74□□□□□ -0.21
HDAC6-217ENST00000469223 TCRBV21S2A2A0A5A6 115 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 OR6C75A6NL08 312 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 SGK1O00141 431 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 OAZ2O95190 189 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 LYPLA2O95372 231 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 ATXN1LP0C7T5 689 aaKnown RBP13.73□□□□□ -0.21
HDAC6-217ENST00000469223 GRM5P41594 1212 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 IFNAR2P48551 515 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 ZNF33AQ06730 810 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 PLEKHG6Q3KR16 790 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 NT5DC1Q5TFE4 455 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 TXNDC8Q6A555 127 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 ALKAL1Q6UXT8 129 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 DHX32Q7L7V1 743 aaKnown RBP13.73□□□□□ -0.21
HDAC6-217ENST00000469223 BLIDQ8IZY5 108 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 FAM181AQ8N9Y4 354 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 TXNDC5Q8NBS9 432 aaKnown RBP13.73□□□□□ -0.21
HDAC6-217ENST00000469223 DEPTORQ8TB45 409 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 SETD7Q8WTS6 366 aaKnown RBP13.73□□□□□ -0.21
HDAC6-217ENST00000469223 HSPA12BQ96MM6 686 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 CDT1Q9H211 546 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 SH3GLB2Q9NR46 395 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 DAXXQ9UER7 740 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-217ENST00000469223 ZMYM5Q9UJ78 669 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 DNMT3LQ9UJW3 386 aa13.73□□□□□ -0.21
HDAC6-217ENST00000469223 CAPN8A6NHC0 703 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 M0QZQ0 153 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 KCNE1P15382 129 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 OPRD1P41143 372 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 GRIK2Q13002 908 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 USP4Q13107 963 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 BYSLQ13895 437 aaKnown RBP13.72□□□□□ -0.21
HDAC6-217ENST00000469223 NPY5RQ15761 445 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 ZNF77Q15935 545 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 TAF12Q16514 161 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 EML3Q32P44 896 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 ZNF568Q3ZCX4 644 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 LRRC69Q6ZNQ3 347 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 KRT25Q7Z3Z0 450 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 APBB1IPQ7Z5R6 666 aaPredicted RBP13.72□□□□□ -0.21
HDAC6-217ENST00000469223 USP37Q86T82 979 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 TMEM150AQ86TG1 271 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 SLC41A1Q8IVJ1 513 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 SFTPA1Q8IWL2 248 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 GALNT15Q8N3T1 639 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 PDCD7Q8N8D1 485 aaKnown RBP13.72□□□□□ -0.21
HDAC6-217ENST00000469223 MCPH1Q8NEM0 835 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 GIPC2Q8TF65 315 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 OSCP1Q8WVF1 389 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 PNMA5Q96PV4 448 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 PRDM16Q9HAZ2 1276 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 ZDHHC4Q9NPG8 344 aa13.72□□□□□ -0.21
HDAC6-217ENST00000469223 TLN1Q9Y490 2541 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms