RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 YWHAHQ04917 246 aaPredicted RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 ITIH3Q06033 890 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 TYRO3Q06418 890 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 DHX9Q08211 1270 aaKnown RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 TRPC3Q13507 836 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 NCOA4Q13772 614 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 RAB33AQ14088 237 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 AGERQ15109 404 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 MAPRE1Q15691 268 aaKnown RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 AAK1Q2M2I8 961 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 UVSSAQ2YD98 709 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 RNFT1Q5M7Z0 435 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 RTP2Q5QGT7 225 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 C1orf220Q5T0J3 134 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 FAM171A1Q5VUB5 890 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 CDKAL1Q5VV42 579 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 TDRD10Q5VZ19 366 aaKnown RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 ZNF385CQ66K41 422 aaPredicted RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 ZNF280DQ6N043 979 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 CAVIN1Q6NZI2 390 aaKnown RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 VASH1Q7L8A9 365 aaPredicted RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 TMC7Q7Z402 723 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 SPRED2Q7Z698 418 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 MICALL1Q8N3F8 863 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 CCDC150Q8NCX0 1101 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 FBXL13Q8NEE6 735 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 ZSWIM2Q8NEG5 633 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 CMASQ8NFW8 434 aaPredicted RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 OR5B17Q8NGF7 314 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 ZNF461Q8TAF7 563 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 LNX1Q8TBB1 728 aaPredicted RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 C2orf15Q8WU43 125 aaKnown RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 CASP10Q92851 521 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 CCDC127Q96BQ5 260 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 PABPC5Q96DU9 382 aaKnown RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 FUBP3Q96I24 572 aaKnown RBP eCLIP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 HPDLQ96IR7 371 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 SENP8Q96LD8 212 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 CNTNAP3BQ96NU0 1288 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 MED15Q96RN5 788 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 ACBD6Q9BR61 282 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 PAAF1Q9BRP4 392 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 ANP32EQ9BTT0 268 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 FUCA2Q9BTY2 467 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 CNTNAP3Q9BZ76 1288 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 DNAI2Q9GZS0 605 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 CXCL16Q9H2A7 254 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 PLEKHA4Q9H4M7 779 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 CYP3A43Q9HB55 503 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 GOLGA2P5Q9HBQ8 144 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 ABCB6Q9NP58 842 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 ALG13Q9NP73 1137 aaKnown RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 ENTPD7Q9NQZ7 604 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 DZANK1Q9NVP4 752 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 ZDHHC7Q9NXF8 308 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 PGPEP1Q9NXJ5 209 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 MTUS1Q9ULD2 1270 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 CTNND2Q9UQB3 1225 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.77□□□□□ -1.81
TRIM59-202ENST00000468542 TRIM49BA6NDI0 452 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 HIDE1A8MVS5 230 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 NT5C1B-RDH14C9J2C7 533 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 F8W810 466 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 CYB561D2O14569 222 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 HUS1O60921 280 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 ABLIM3O94929 683 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 CXCL14O95715 111 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 GLUD1P00367 558 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 CST3P01034 146 aaPredicted RBP3.77□□□□□ -1.81
TRIM59-202ENST00000468542 CNPP09543 421 aaKnown RBP3.77□□□□□ -1.81
TRIM59-202ENST00000468542 HNRNPA1P09651 372 aaKnown RBP eCLIP3.77□□□□□ -1.81
TRIM59-202ENST00000468542 ATF2P15336 505 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 ZNF18P17022 549 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 TRIM21P19474 475 aaKnown RBP3.77□□□□□ -1.81
TRIM59-202ENST00000468542 IBSPP21815 317 aaPredicted RBP3.77□□□□□ -1.81
TRIM59-202ENST00000468542 WARSP23381 471 aaKnown RBP3.77□□□□□ -1.81
TRIM59-202ENST00000468542 TBXAS1P24557 533 aaPredicted RBP3.77□□□□□ -1.81
TRIM59-202ENST00000468542 IRS1P35568 1242 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 ASPAP45381 313 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 FMO5P49326 533 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 ZNF165P49910 485 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 CLCN4P51793 760 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 TNNC1P63316 161 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 NOP14P78316 857 aaKnown RBP3.77□□□□□ -1.81
TRIM59-202ENST00000468542 DLG4P78352 724 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 FOXK2Q01167 660 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 GCNT1Q02742 428 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 PPP3CAQ08209 521 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 INCA1Q0VD86 236 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 HYAL1Q12794 435 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 GPR17Q13304 367 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 ADAM15Q13444 863 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 BIRC3Q13489 604 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 NFKBIBQ15653 356 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 PSMD5Q16401 504 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 NFE2Q16621 373 aaPredicted RBP3.77□□□□□ -1.81
TRIM59-202ENST00000468542 MEA1Q16626 185 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 MAN2A1Q16706 1144 aa3.77□□□□□ -1.81
TRIM59-202ENST00000468542 SOWAHAQ2M3V2 549 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms