RNA–Protein interactions for RNA: ENST00000468347.1

SHQ1-204, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-204ENST00000468347 ZNF408Q9H9D4 720 aa1.74□□□□□ -2.13
SHQ1-204ENST00000468347 LANCL2Q9NS86 450 aa1.74□□□□□ -2.13
SHQ1-204ENST00000468347 SAMD15Q9P1V8 674 aa1.74□□□□□ -2.13
SHQ1-204ENST00000468347 R3HCC1Q9Y3T6 440 aaKnown RBP1.74□□□□□ -2.13
SHQ1-204ENST00000468347 ACTL7AQ9Y615 435 aa1.74□□□□□ -2.13
SHQ1-204ENST00000468347 TMEM232C9JQI7 657 aa1.73□□□□□ -2.13
SHQ1-204ENST00000468347 TRIAP1O43715 76 aa1.73□□□□□ -2.13
SHQ1-204ENST00000468347 SYF2O95926 243 aaKnown RBP1.73□□□□□ -2.13
SHQ1-204ENST00000468347 NPSP0C0P6 89 aa1.73□□□□□ -2.13
SHQ1-204ENST00000468347 PIM1P11309 404 aaPredicted RBP1.73□□□□□ -2.13
SHQ1-204ENST00000468347 CRIP2P52943 208 aaPredicted RBP1.73□□□□□ -2.13
SHQ1-204ENST00000468347 RPS13P62277 151 aaKnown RBP1.73□□□□□ -2.13
SHQ1-204ENST00000468347 NAALADL2Q58DX5 795 aa1.73□□□□□ -2.13
SHQ1-204ENST00000468347 ZCCHC8Q6NZY4 707 aaKnown RBP1.73□□□□□ -2.13
SHQ1-204ENST00000468347 SERPINA13PQ6UXR4 307 aa1.73□□□□□ -2.13
SHQ1-204ENST00000468347 B4GALNT4Q76KP1 1039 aa1.73□□□□□ -2.13
SHQ1-204ENST00000468347 ELP5Q8TE02 316 aa1.73□□□□□ -2.13
SHQ1-204ENST00000468347 TUBB6Q9BUF5 446 aa1.73□□□□□ -2.13
SHQ1-204ENST00000468347 WNT8AQ9H1J5 351 aa1.73□□□□□ -2.13
SHQ1-204ENST00000468347 LDAHQ9H6V9 325 aa1.73□□□□□ -2.13
SHQ1-204ENST00000468347 IGSF5Q9NSI5 407 aa1.73□□□□□ -2.13
SHQ1-204ENST00000468347 WNT16Q9UBV4 365 aa1.73□□□□□ -2.13
SHQ1-204ENST00000468347 B4GALT6Q9UBX8 382 aa1.73□□□□□ -2.13
SHQ1-204ENST00000468347 AJAP1Q9UKB5 411 aaPredicted RBP1.73□□□□□ -2.13
SHQ1-204ENST00000468347 MAGED2Q9UNF1 606 aaPredicted RBP1.73□□□□□ -2.13
SHQ1-204ENST00000468347 PPP2R3BQ9Y5P8 575 aa1.73□□□□□ -2.13
SHQ1-204ENST00000468347 SMTNL1A8MU46 457 aa1.72□□□□□ -2.13
SHQ1-204ENST00000468347 PODXLO00592 558 aa1.72□□□□□ -2.13
SHQ1-204ENST00000468347 ACAA1P09110 424 aaPredicted RBP1.72□□□□□ -2.13
SHQ1-204ENST00000468347 HOXB2P14652 356 aa1.72□□□□□ -2.13
SHQ1-204ENST00000468347 MLH1P40692 756 aa1.72□□□□□ -2.13
SHQ1-204ENST00000468347 GLIPR1P48060 266 aa1.72□□□□□ -2.13
SHQ1-204ENST00000468347 DLX5P56178 289 aa1.72□□□□□ -2.13
SHQ1-204ENST00000468347 PER3P56645 1201 aa1.72□□□□□ -2.13
SHQ1-204ENST00000468347 ERVK11-1P61568 191 aa1.72□□□□□ -2.13
SHQ1-204ENST00000468347 TCEA2Q15560 299 aa1.72□□□□□ -2.13
SHQ1-204ENST00000468347 SLC39A5Q6ZMH5 540 aa1.72□□□□□ -2.13
SHQ1-204ENST00000468347 IGFBPL1Q8WX77 278 aa1.72□□□□□ -2.13
SHQ1-204ENST00000468347 RIN2Q8WYP3 895 aaPredicted RBP1.72□□□□□ -2.13
SHQ1-204ENST00000468347 SNX18Q96RF0 628 aa1.72□□□□□ -2.13
SHQ1-204ENST00000468347 SLC7A10Q9NS82 523 aa1.72□□□□□ -2.13
SHQ1-204ENST00000468347 OXSMQ9NWU1 459 aa1.72□□□□□ -2.13
SHQ1-204ENST00000468347 TCRBV5S1A1TA0A578 114 aa1.71□□□□□ -2.14
SHQ1-204ENST00000468347 KIAA0391O15091 583 aaKnown RBP1.71□□□□□ -2.14
SHQ1-204ENST00000468347 KCNQ2O43526 872 aa1.71□□□□□ -2.14
SHQ1-204ENST00000468347 EXOC3O60645 756 aa1.71□□□□□ -2.14
SHQ1-204ENST00000468347 HAUS5O94927 633 aa1.71□□□□□ -2.14
SHQ1-204ENST00000468347 AGFG2O95081 481 aa1.71□□□□□ -2.14
SHQ1-204ENST00000468347 PCSK1P29120 753 aa1.71□□□□□ -2.14
SHQ1-204ENST00000468347 ANO7Q6IWH7 933 aa1.71□□□□□ -2.14
SHQ1-204ENST00000468347 PRSS57Q6UWY2 283 aa1.71□□□□□ -2.14
SHQ1-204ENST00000468347 NT5DC4Q86YG4 428 aa1.71□□□□□ -2.14
SHQ1-204ENST00000468347 LYG1Q8N1E2 194 aa1.71□□□□□ -2.14
SHQ1-204ENST00000468347 CFAP52Q8N1V2 620 aa1.71□□□□□ -2.14
SHQ1-204ENST00000468347 TERB1Q8NA31 727 aa1.71□□□□□ -2.14
SHQ1-204ENST00000468347 GPR156Q8NFN8 814 aa1.71□□□□□ -2.14
SHQ1-204ENST00000468347 SERHLQ9NQF3 203 aa1.71□□□□□ -2.14
SHQ1-204ENST00000468347 TMEM140Q9NV12 185 aa1.71□□□□□ -2.14
SHQ1-204ENST00000468347 UTP18Q9Y5J1 556 aaKnown RBP eCLIP1.71□□□□□ -2.14
SHQ1-204ENST00000468347 IGLV2-11P01706 119 aa1.7□□□□□ -2.14
SHQ1-204ENST00000468347 PDHA1P08559 390 aa1.7□□□□□ -2.14
SHQ1-204ENST00000468347 IL6RP08887 468 aaPredicted RBP1.7□□□□□ -2.14
SHQ1-204ENST00000468347 ZNF10P21506 573 aaPredicted RBP1.7□□□□□ -2.14
SHQ1-204ENST00000468347 LIPAP38571 399 aa1.7□□□□□ -2.14
SHQ1-204ENST00000468347 CSRP3P50461 194 aa1.7□□□□□ -2.14
SHQ1-204ENST00000468347 RENBPP51606 427 aa1.7□□□□□ -2.14
SHQ1-204ENST00000468347 MANFP55145 182 aaKnown RBP1.7□□□□□ -2.14
SHQ1-204ENST00000468347 PIGFQ07326 219 aa1.7□□□□□ -2.14
SHQ1-204ENST00000468347 FAM187BQ17R55 369 aa1.7□□□□□ -2.14
SHQ1-204ENST00000468347 C14orf177Q52M58 125 aa1.7□□□□□ -2.14
SHQ1-204ENST00000468347 PLEKHA7Q6IQ23 1121 aa1.7□□□□□ -2.14
SHQ1-204ENST00000468347 COL23A1Q86Y22 540 aaPredicted RBP1.7□□□□□ -2.14
SHQ1-204ENST00000468347 NLGN4YQ8NFZ3 816 aaPredicted RBP1.7□□□□□ -2.14
SHQ1-204ENST00000468347 FAM136AQ96C01 138 aa1.7□□□□□ -2.14
SHQ1-204ENST00000468347 PYGO2Q9BRQ0 406 aa1.7□□□□□ -2.14
SHQ1-204ENST00000468347 ACBD3Q9H3P7 528 aa1.7□□□□□ -2.14
SHQ1-204ENST00000468347 SDF2L1Q9HCN8 221 aa1.7□□□□□ -2.14
SHQ1-204ENST00000468347 H2AFY2Q9P0M6 372 aaPredicted RBP1.7□□□□□ -2.14
SHQ1-204ENST00000468347 SH2B3Q9UQQ2 575 aa1.7□□□□□ -2.14
SHQ1-204ENST00000468347 RUVBL1Q9Y265 456 aaKnown RBP1.7□□□□□ -2.14
SHQ1-204ENST00000468347 ZNF318Q5VUA4 2279 aa1.7□□□□□ -2.14
SHQ1-204ENST00000468347 SYT5O00445 386 aa1.69□□□□□ -2.14
SHQ1-204ENST00000468347 CTIFO43310 598 aaKnown RBP1.69□□□□□ -2.14
SHQ1-204ENST00000468347 FAM153BP0C7A2 387 aa1.69□□□□□ -2.14
SHQ1-204ENST00000468347 SLC6A4P31645 630 aa1.69□□□□□ -2.14
SHQ1-204ENST00000468347 ART1P52961 327 aa1.69□□□□□ -2.14
SHQ1-204ENST00000468347 SOX8P57073 446 aa1.69□□□□□ -2.14
SHQ1-204ENST00000468347 POU6F2P78424 691 aaPredicted RBP1.69□□□□□ -2.14
SHQ1-204ENST00000468347 DSC2Q02487 901 aa1.69□□□□□ -2.14
SHQ1-204ENST00000468347 ZNF672Q499Z4 452 aaPredicted RBP1.69□□□□□ -2.14
SHQ1-204ENST00000468347 KIAA1755Q5JYT7 1200 aa1.69□□□□□ -2.14
SHQ1-204ENST00000468347 GJC2Q5T442 439 aaPredicted RBP1.69□□□□□ -2.14
SHQ1-204ENST00000468347 TAPT1Q6NXT6 567 aa1.69□□□□□ -2.14
SHQ1-204ENST00000468347 SPSB3Q6PJ21 355 aa1.69□□□□□ -2.14
SHQ1-204ENST00000468347 POC1BQ8TC44 478 aa1.69□□□□□ -2.14
SHQ1-204ENST00000468347 OIT3Q8WWZ8 545 aa1.69□□□□□ -2.14
SHQ1-204ENST00000468347 KLHL32Q96NJ5 620 aa1.69□□□□□ -2.14
SHQ1-204ENST00000468347 NODALQ96S42 347 aa1.69□□□□□ -2.14
SHQ1-204ENST00000468347 LCHNA4D1U4 455 aa1.68□□□□□ -2.14
SHQ1-204ENST00000468347 RNF8O76064 485 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms