RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 FOXD4L4Q8WXT5 416 aaPredicted RBP26.33■■□□□ 1.81
PTCH1-210ENST00000468211 RMDN1Q96DB5 314 aa26.33■■□□□ 1.81
PTCH1-210ENST00000468211 TRIM9Q9C026 710 aa26.33■■□□□ 1.81
PTCH1-210ENST00000468211 TNMDQ9H2S6 317 aa26.33■■□□□ 1.81
PTCH1-210ENST00000468211 GDAP2Q9NXN4 497 aa26.33■■□□□ 1.81
PTCH1-210ENST00000468211 DDX43Q9NXZ2 648 aaKnown RBP26.33■■□□□ 1.81
PTCH1-210ENST00000468211 ITGA11Q9UKX5 1188 aa26.33■■□□□ 1.81
PTCH1-210ENST00000468211 DNAH14Q0VDD8 3507 aa26.33■■□□□ 1.81
PTCH1-210ENST00000468211 CACNA1AO00555 2505 aa26.33■■□□□ 1.81
PTCH1-210ENST00000468211 ANAPC1Q9H1A4 1944 aa26.33■■□□□ 1.81
PTCH1-210ENST00000468211 MYBPHLA2RUH7 354 aa26.32■■□□□ 1.8
PTCH1-210ENST00000468211 SPECC1L-ADORA2AF8WAN1 911 aa26.32■■□□□ 1.8
PTCH1-210ENST00000468211 HUS1O60921 280 aa26.32■■□□□ 1.8
PTCH1-210ENST00000468211 PPP6R2O75170 966 aa26.32■■□□□ 1.8
PTCH1-210ENST00000468211 PRPF40AO75400 957 aaKnown RBP26.32■■□□□ 1.8
PTCH1-210ENST00000468211 KRT19P08727 400 aa26.32■■□□□ 1.8
PTCH1-210ENST00000468211 CTHP32929 405 aa26.32■■□□□ 1.8
PTCH1-210ENST00000468211 TSPY1Q01534 308 aa26.32■■□□□ 1.8
PTCH1-210ENST00000468211 SATB1Q01826 763 aa26.32■■□□□ 1.8
PTCH1-210ENST00000468211 TAF12Q16514 161 aa26.32■■□□□ 1.8
PTCH1-210ENST00000468211 SHC4Q6S5L8 630 aa26.32■■□□□ 1.8
PTCH1-210ENST00000468211 CBWD2Q8IUF1 395 aa26.32■■□□□ 1.8
PTCH1-210ENST00000468211 BPIFB1Q8TDL5 484 aa26.32■■□□□ 1.8
PTCH1-210ENST00000468211 DHX58Q96C10 678 aa26.32■■□□□ 1.8
PTCH1-210ENST00000468211 ACBD6Q9BR61 282 aa26.32■■□□□ 1.8
PTCH1-210ENST00000468211 EPC1Q9H2F5 836 aa26.32■■□□□ 1.8
PTCH1-210ENST00000468211 C8orf33Q9H7E9 229 aaPredicted RBP26.32■■□□□ 1.8
PTCH1-210ENST00000468211 SNX9Q9Y5X1 595 aa26.32■■□□□ 1.8
PTCH1-210ENST00000468211 CYP2F1P24903 491 aa26.31■■□□□ 1.8
PTCH1-210ENST00000468211 RBP5P82980 135 aa26.31■■□□□ 1.8
PTCH1-210ENST00000468211 DDR2Q16832 855 aa26.31■■□□□ 1.8
PTCH1-210ENST00000468211 INTS6LQ5JSJ4 861 aaKnown RBP26.31■■□□□ 1.8
PTCH1-210ENST00000468211 Q6ZS52 159 aa26.31■■□□□ 1.8
PTCH1-210ENST00000468211 CMTM8Q8IZV2 173 aa26.31■■□□□ 1.8
PTCH1-210ENST00000468211 GCNAQ96QF7 691 aa26.31■■□□□ 1.8
PTCH1-210ENST00000468211 INTS13Q9NVM9 706 aa26.31■■□□□ 1.8
PTCH1-210ENST00000468211 GTF3C4Q9UKN8 822 aa26.31■■□□□ 1.8
PTCH1-210ENST00000468211 SMG5Q9UPR3 1016 aaKnown RBP26.31■■□□□ 1.8
PTCH1-210ENST00000468211 CCL26Q9Y258 94 aa26.31■■□□□ 1.8
PTCH1-210ENST00000468211 PTPRDP23468 1912 aa26.3■■□□□ 1.8
PTCH1-210ENST00000468211 TMEM191BP0C7N4 346 aa26.3■■□□□ 1.8
PTCH1-210ENST00000468211 NFE2Q16621 373 aaPredicted RBP26.3■■□□□ 1.8
PTCH1-210ENST00000468211 SOWAHAQ2M3V2 549 aa26.3■■□□□ 1.8
PTCH1-210ENST00000468211 RALGPS2Q86X27 583 aaPredicted RBP26.3■■□□□ 1.8
PTCH1-210ENST00000468211 TMEM86AQ8N2M4 240 aa26.3■■□□□ 1.8
PTCH1-210ENST00000468211 MAB21L3Q8N8X9 362 aa26.3■■□□□ 1.8
PTCH1-210ENST00000468211 RIN3Q8TB24 985 aa26.3■■□□□ 1.8
PTCH1-210ENST00000468211 LEO1Q8WVC0 666 aaPredicted RBP26.3■■□□□ 1.8
PTCH1-210ENST00000468211 MSANTD3Q96H12 275 aa26.3■■□□□ 1.8
PTCH1-210ENST00000468211 ZNF396Q96N95 335 aaPredicted RBP26.3■■□□□ 1.8
PTCH1-210ENST00000468211 IER2Q9BTL4 223 aa26.3■■□□□ 1.8
PTCH1-210ENST00000468211 C2orf42Q9NWW7 574 aa26.3■■□□□ 1.8
PTCH1-210ENST00000468211 MAGED2Q9UNF1 606 aaPredicted RBP26.3■■□□□ 1.8
PTCH1-210ENST00000468211 ATG2BQ96BY7 2078 aa26.3■■□□□ 1.8
PTCH1-210ENST00000468211 GABRDO14764 452 aa26.29■■□□□ 1.8
PTCH1-210ENST00000468211 HOXC13P31276 330 aa26.29■■□□□ 1.8
PTCH1-210ENST00000468211 CCR3P51677 355 aa26.29■■□□□ 1.8
PTCH1-210ENST00000468211 PON2Q15165 354 aa26.29■■□□□ 1.8
PTCH1-210ENST00000468211 FOXD4L6Q3SYB3 417 aaPredicted RBP26.29■■□□□ 1.8
PTCH1-210ENST00000468211 TXNDC8Q6A555 127 aa26.29■■□□□ 1.8
PTCH1-210ENST00000468211 FOXD4L3Q6VB84 417 aaPredicted RBP26.29■■□□□ 1.8
PTCH1-210ENST00000468211 EPM2AIP1Q7L775 607 aaPredicted RBP26.29■■□□□ 1.8
PTCH1-210ENST00000468211 ADGRF2Q8IZF7 708 aa26.29■■□□□ 1.8
PTCH1-210ENST00000468211 CELF5Q8N6W0 485 aaKnown RBP26.29■■□□□ 1.8
PTCH1-210ENST00000468211 USP13Q92995 863 aaPredicted RBP26.29■■□□□ 1.8
PTCH1-210ENST00000468211 FAM126AQ9BYI3 521 aaPredicted RBP26.29■■□□□ 1.8
PTCH1-210ENST00000468211 HSPBP1Q9NZL4 362 aa26.29■■□□□ 1.8
PTCH1-210ENST00000468211 NCDNQ9UBB6 729 aa26.29■■□□□ 1.8
PTCH1-210ENST00000468211 ZNF233A6NK53 670 aa26.28■■□□□ 1.8
PTCH1-210ENST00000468211 CUTAO60888 179 aa26.28■■□□□ 1.8
PTCH1-210ENST00000468211 ATP2C2O75185 946 aa26.28■■□□□ 1.8
PTCH1-210ENST00000468211 TADA3O75528 432 aa26.28■■□□□ 1.8
PTCH1-210ENST00000468211 YEATS4O95619 227 aa26.28■■□□□ 1.8
PTCH1-210ENST00000468211 CASP1P29466 404 aa26.28■■□□□ 1.8
PTCH1-210ENST00000468211 CXCL12P48061 93 aa26.28■■□□□ 1.8
PTCH1-210ENST00000468211 ASIC1P78348 528 aa26.28■■□□□ 1.8
PTCH1-210ENST00000468211 MYL7Q01449 175 aa26.28■■□□□ 1.8
PTCH1-210ENST00000468211 DMWDQ09019 674 aa26.28■■□□□ 1.8
PTCH1-210ENST00000468211 TOP6BLQ8N6T0 577 aa26.28■■□□□ 1.8
PTCH1-210ENST00000468211 ABCB6Q9NP58 842 aa26.28■■□□□ 1.8
PTCH1-210ENST00000468211 GKN1Q9NS71 199 aa26.28■■□□□ 1.8
PTCH1-210ENST00000468211 KIAA0391O15091 583 aaKnown RBP26.27■■□□□ 1.8
PTCH1-210ENST00000468211 TGFB1I1O43294 461 aa26.27■■□□□ 1.8
PTCH1-210ENST00000468211 CSH1P0DML2 217 aa26.27■■□□□ 1.8
PTCH1-210ENST00000468211 CSH2P0DML3 217 aa26.27■■□□□ 1.8
PTCH1-210ENST00000468211 LRRC32Q14392 662 aa26.27■■□□□ 1.8
PTCH1-210ENST00000468211 LIMS2Q7Z4I7 341 aa26.27■■□□□ 1.8
PTCH1-210ENST00000468211 SPEM1Q8N4L4 309 aa26.27■■□□□ 1.8
PTCH1-210ENST00000468211 ZNF507Q8TCN5 953 aa26.27■■□□□ 1.8
PTCH1-210ENST00000468211 KBTBD7Q8WVZ9 684 aa26.27■■□□□ 1.8
PTCH1-210ENST00000468211 SNX21Q969T3 373 aa26.27■■□□□ 1.8
PTCH1-210ENST00000468211 ANKRD36BP1Q96IX9 119 aa26.27■■□□□ 1.8
PTCH1-210ENST00000468211 FAM83CQ9BQN1 747 aa26.27■■□□□ 1.8
PTCH1-210ENST00000468211 CUEDC2Q9H467 287 aa26.27■■□□□ 1.8
PTCH1-210ENST00000468211 HPS4Q9NQG7 708 aa26.27■■□□□ 1.8
PTCH1-210ENST00000468211 OTOL1A6NHN0 477 aaPredicted RBP26.26■■□□□ 1.79
PTCH1-210ENST00000468211 NOL4O94818 638 aa26.26■■□□□ 1.79
PTCH1-210ENST00000468211 LMO2P25791 158 aa26.26■■□□□ 1.79
PTCH1-210ENST00000468211 PLCB2Q00722 1185 aa26.26■■□□□ 1.79
PTCH1-210ENST00000468211 FOXK2Q01167 660 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms