RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 AKAP3O75969 853 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 VNN1O95497 513 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 WARSP23381 471 aaKnown RBP12.36□□□□□ -0.43
CDHR3-205ENST00000468143 FCARP24071 287 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 NR2F2P24468 414 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 PCSK1P29120 753 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 GNL1P36915 607 aaPredicted RBP12.36□□□□□ -0.43
CDHR3-205ENST00000468143 CDH8P55286 799 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 CYP4F8P98187 520 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 ADAM9Q13443 819 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 NFE2Q16621 373 aaPredicted RBP12.36□□□□□ -0.43
CDHR3-205ENST00000468143 GPR158Q5T848 1215 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 CWF19L1Q69YN2 538 aaKnown RBP12.36□□□□□ -0.43
CDHR3-205ENST00000468143 SPATA2LQ8IUW3 424 aaPredicted RBP12.36□□□□□ -0.43
CDHR3-205ENST00000468143 SCN4BQ8IWT1 228 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 SMARCD2Q92925 531 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 ELSPBP1Q96BH3 223 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 ASB16Q96NS5 453 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 SYT15Q9BQS2 421 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 XYLT2Q9H1B5 865 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 SNX25Q9H3E2 840 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 MMRN2Q9H8L6 949 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 CRTAC1Q9NQ79 661 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 CDH9Q9ULB4 789 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 DOCK6Q96HP0 2047 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 MYO10Q9HD67 2058 aa12.36□□□□□ -0.43
CDHR3-205ENST00000468143 NOTCH4Q99466 2003 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 TSC2P49815 1807 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 RFX1P22670 979 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 ATICP31939 592 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 PRCPP42785 496 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 RAP1GAPP47736 663 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 VAMP7P51809 220 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 AP3M2P53677 418 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 CLDN10P78369 228 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 CYP27A1Q02318 531 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 NCOA4Q13772 614 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 SLC44A4Q53GD3 710 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 C1orf220Q5T0J3 134 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 FAM171BQ6P995 826 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 VITQ6UXI7 678 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 SV2AQ7L0J3 742 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 FAM186BQ8IYM0 893 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 SPATA18Q8TC71 538 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 TMC2Q8TDI7 906 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 TMEM174Q8WUU8 243 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 SMARCE1Q969G3 411 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 MYLPFQ96A32 169 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 SYAP1Q96A49 352 aaPredicted RBP12.35□□□□□ -0.43
CDHR3-205ENST00000468143 DPEP3Q9H4B8 488 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 TBC1D17Q9HA65 648 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 IL21Q9HBE4 155 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 ARHGEF3Q9NR81 526 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 RMND1Q9NWS8 449 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 MAGEC2Q9UBF1 373 aaPredicted RBP12.35□□□□□ -0.43
CDHR3-205ENST00000468143 TCHHQ07283 1943 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 NCANO14594 1321 aa12.35□□□□□ -0.43
CDHR3-205ENST00000468143 SLC38A8A6NNN8 435 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 A8MXQ7 604 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 TACC1O75410 805 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 SMC2O95347 1197 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 STAU1O95793 577 aaKnown RBP12.34□□□□□ -0.43
CDHR3-205ENST00000468143 TRIM49P0CI25 452 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 TRIM49CP0CI26 452 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 HMGA1P17096 107 aaKnown RBP12.34□□□□□ -0.43
CDHR3-205ENST00000468143 AOC1P19801 751 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 CD72P21854 359 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 BDNFP23560 247 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 RPL13P26373 211 aaKnown RBP12.34□□□□□ -0.43
CDHR3-205ENST00000468143 PSMC2P35998 433 aaKnown RBP12.34□□□□□ -0.43
CDHR3-205ENST00000468143 PLA2G5P39877 138 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 GCLMP48507 274 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 CLCN5P51795 746 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 RPL10AP62906 217 aaKnown RBP12.34□□□□□ -0.43
CDHR3-205ENST00000468143 PPP3CAQ08209 521 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 ZNF699Q32M78 642 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 ZCWPW2Q504Y3 356 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 ARHGAP15Q53QZ3 475 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 ZNF667Q5HYK9 610 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 MDH1BQ5I0G3 518 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 ZNF658Q5TYW1 1059 aaPredicted RBP12.34□□□□□ -0.43
CDHR3-205ENST00000468143 SPOPLQ6IQ16 392 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 SCARA5Q6ZMJ2 495 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 ARID3BQ8IVW6 561 aaPredicted RBP12.34□□□□□ -0.43
CDHR3-205ENST00000468143 RSPRY1Q96DX4 576 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 TIGD1Q96MW7 591 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 GSDMAQ96QA5 445 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 MKNK1Q9BUB5 465 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 TRMT61BQ9BVS5 477 aaKnown RBP12.34□□□□□ -0.43
CDHR3-205ENST00000468143 GPR88Q9GZN0 384 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 SMG9Q9H0W8 520 aaKnown RBP12.34□□□□□ -0.43
CDHR3-205ENST00000468143 SDCBP2Q9H190 292 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 SMYD3Q9H7B4 428 aa12.34□□□□□ -0.43
CDHR3-205ENST00000468143 CIZ1Q9ULV3 898 aaPredicted RBP12.34□□□□□ -0.43
CDHR3-205ENST00000468143 ARIH1Q9Y4X5 557 aaPredicted RBP12.34□□□□□ -0.43
CDHR3-205ENST00000468143 HEPACAM2A8MVW5 462 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 H0Y858 1186 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 CLDN5O00501 218 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 KINO60870 393 aaKnown RBP12.33□□□□□ -0.44
CDHR3-205ENST00000468143 LRRN2O75325 713 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms