RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 SIT1Q9Y3P8 196 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 TRPV2Q9Y5S1 764 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 CEP295Q9C0D2 2601 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 ZMYM6O95789 1325 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 FRMPD4Q14CM0 1322 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 FASNP49327 2511 aaKnown RBP6.2□□□□□ -1.42
PTCD3-207ENST00000467273 SETXQ7Z333 2677 aaKnown RBP6.19□□□□□ -1.42
PTCD3-207ENST00000467273 SPEGQ15772 3267 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 C2orf71A6NGG8 1288 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 RGS13O14921 159 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 TBC1D4O60343 1298 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 LRP3O75074 770 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 UBOX5O94941 541 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 CST3P01034 146 aaPredicted RBP6.19□□□□□ -1.42
PTCD3-207ENST00000467273 MAGEA9P43362 315 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 GALK1P51570 392 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 QRICH1Q2TAL8 776 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 MARCH8Q5T0T0 291 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 EGFLAMQ63HQ2 1017 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 KIAA1211LQ6NV74 962 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 KCNT2Q6UVM3 1135 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 SPATC1Q76KD6 591 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 GPR149Q86SP6 731 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 LRRC43Q8N309 656 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 DCLK2Q8N568 766 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 KLHL6Q8WZ60 621 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 GLG1Q92896 1179 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 CCDC74BQ96LY2 380 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 ZNF558Q96NG5 402 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 APOL5Q9BWW9 433 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 CELF4Q9BZC1 486 aaKnown RBP6.19□□□□□ -1.42
PTCD3-207ENST00000467273 TMEM117Q9H0C3 514 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 EPC1Q9H2F5 836 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 CWH43Q9H720 699 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 TBC1D17Q9HA65 648 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 ATP6V0A4Q9HBG4 840 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 RGS18Q9NS28 235 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 TYW1Q9NV66 732 aaKnown RBP6.19□□□□□ -1.42
PTCD3-207ENST00000467273 SPG21Q9NZD8 308 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 PFDN2Q9UHV9 154 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 ANGPTL2Q9UKU9 493 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 PCDHA1Q9Y5I3 950 aa6.19□□□□□ -1.42
PTCD3-207ENST00000467273 DENND3A2RUS2 1198 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 TBKBP1A7MCY6 615 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 C9IYK1 514 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 GCOM1H8Y6P7 765 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-207ENST00000467273 SLC30A4O14863 429 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 FOXP2O15409 715 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 CLASP2O75122 1294 aaKnown RBP6.18□□□□□ -1.42
PTCD3-207ENST00000467273 POLR2MP0CAP2 368 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 GBP1P32455 592 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 TCF7P36402 384 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-207ENST00000467273 AFF3P51826 1226 aaKnown RBP6.18□□□□□ -1.42
PTCD3-207ENST00000467273 POLGP54098 1239 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-207ENST00000467273 FAM189BP81408 668 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 SLC7A5Q01650 507 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 NCAPHQ15003 741 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 GAB4Q2WGN9 574 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 MTERF2Q49AM1 385 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 RARS2Q5T160 578 aaKnown RBP6.18□□□□□ -1.42
PTCD3-207ENST00000467273 TDRD10Q5VZ19 366 aaKnown RBP6.18□□□□□ -1.42
PTCD3-207ENST00000467273 SIRT2Q8IXJ6 389 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 ZBTB44Q8NCP5 570 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 PJA1Q8NG27 643 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 IL31RAQ8NI17 732 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 ATRIPQ8WXE1 791 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 STAMQ92783 540 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 CDHR1Q96JP9 859 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 SLC6A18Q96N87 628 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 FAM126AQ9BYI3 521 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-207ENST00000467273 OSBPL6Q9BZF3 934 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 DUSP15Q9H1R2 295 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-207ENST00000467273 SMARCAD1Q9H4L7 1026 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 RNF41Q9H4P4 317 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-207ENST00000467273 SFXN1Q9H9B4 322 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 JMJD4Q9H9V9 463 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 SLC2A4RGQ9NR83 387 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 TOMM22Q9NS69 142 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 DPP7Q9UHL4 492 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 DDX19BQ9UMR2 479 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 PCDHA2Q9Y5H9 948 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 GPR179Q6PRD1 2367 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 TTC41PQ6P2S7 1318 aa6.18□□□□□ -1.42
PTCD3-207ENST00000467273 FRYQ5TBA9 3013 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 SMIM35A0A1B0GVV1 85 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 HMGB1P1B2RPK0 211 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-207ENST00000467273 LAMTOR5O43504 91 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 GOLGA8HP0CJ92 632 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 TGM1P22735 817 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 HSD3B2P26439 372 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 CCNFP41002 786 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 ETV3P41162 512 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 GATMP50440 423 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 STARD6P59095 220 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 MRPS9P82933 396 aaKnown RBP6.17□□□□□ -1.42
PTCD3-207ENST00000467273 VMACQ2NL98 169 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 LETM2Q2VYF4 491 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 RRP12Q5JTH9 1297 aaKnown RBP6.17□□□□□ -1.42
PTCD3-207ENST00000467273 FAM102BQ5T8I3 360 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 UTP14CQ5TAP6 766 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms