RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 ARFGAP1Q8N6T3 406 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 EMC1Q8N766 993 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 OR6J1Q8NGC5 347 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 NPLOC4Q8TAT6 608 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 HPDLQ96IR7 371 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 CDC42EP4Q9H3Q1 356 aaKnown RBP12.07□□□□□ -0.48
HPS1-208ENST00000467246 PPANQ9NQ55 473 aaKnown RBP12.07□□□□□ -0.48
HPS1-208ENST00000467246 HOMER3Q9NSC5 361 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 DNPEPQ9ULA0 475 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 COL1A2P08123 1366 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 CENPFP49454 3210 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 MED7O43513 233 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 ACSL3O95573 720 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 ERBB2P04626 1255 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 PAEPP09466 180 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 PSMC1P62191 440 aaKnown RBP12.07□□□□□ -0.48
HPS1-208ENST00000467246 IFI35P80217 286 aaPredicted RBP12.07□□□□□ -0.48
HPS1-208ENST00000467246 TAP1Q03518 808 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 GPR162Q16538 588 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 PRAMEF19Q5SWL8 479 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 LRRC38Q5VT99 294 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 SPOCD1Q6ZMY3 1216 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 GLIS1Q8NBF1 620 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 TMEM176AQ96HP8 235 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 RBM41Q96IZ5 413 aaKnown RBP12.07□□□□□ -0.48
HPS1-208ENST00000467246 ACAP3Q96P50 834 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 ANAPC5Q9UJX4 755 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 STRIP2Q9ULQ0 834 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 LRRD1A4D1F6 860 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 MICAL2O94851 1124 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 PSMA2P25787 234 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 CETN2P41208 172 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 PSMC4P43686 418 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 BYSLQ13895 437 aaKnown RBP12.06□□□□□ -0.48
HPS1-208ENST00000467246 KCNT1Q5JUK3 1230 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 FBXW10Q5XX13 1052 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 ZNF365Q70YC5 407 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 GSTA5Q7RTV2 222 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 MDM1Q8TC05 714 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 HAUS1Q96CS2 278 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 FAM129AQ9BZQ8 928 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 FAM49AQ9H0Q0 323 aaPredicted RBP12.06□□□□□ -0.48
HPS1-208ENST00000467246 SYNCQ9H7C4 482 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 SIGLEC16A6NMB1 481 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 LIASO43766 372 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 ATICP31939 592 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 SMTNL2Q2TAL5 461 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 PLEKHH3Q7Z736 793 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 XYLT1Q86Y38 959 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 NIPA2Q8N8Q9 360 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 UBA3Q8TBC4 463 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 PGM2Q96G03 612 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 HEXIM2Q96MH2 286 aaKnown RBP12.06□□□□□ -0.48
HPS1-208ENST00000467246 TRAIPQ9BWF2 469 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 ABHD16BQ9H3Z7 469 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 VRTNQ9H8Y1 702 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 ZWILCHQ9H900 591 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 CDHR5Q9HBB8 845 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 DPP3Q9NY33 737 aa12.06□□□□□ -0.48
HPS1-208ENST00000467246 hCG_1818297A0A087WSY0 165 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 UNCXA6NJT0 531 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 E7EVH7 732 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 RGS16O15492 202 aaPredicted RBP12.05□□□□□ -0.48
HPS1-208ENST00000467246 LRCH4O75427 683 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 TJP3O95049 919 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 ZSCAN5DPP0CG00 497 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 KLRC2P26717 231 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 IL1R2P27930 398 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 CDKN2BP42772 138 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 MAGEA9P43362 315 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 DGKDQ16760 1214 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 KAT2BQ92831 832 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 FAM107BQ9H098 131 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 GBA2Q9HCG7 927 aaPredicted RBP12.05□□□□□ -0.48
HPS1-208ENST00000467246 METTL5Q9NRN9 209 aaKnown RBP12.05□□□□□ -0.48
HPS1-208ENST00000467246 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.05□□□□□ -0.48
HPS1-208ENST00000467246 M0QYV0 167 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 PIK3R2O00459 728 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 EBAG9O00559 213 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 DYNC1LI2O43237 492 aaPredicted RBP12.05□□□□□ -0.48
HPS1-208ENST00000467246 HOXD8P13378 290 aaPredicted RBP12.05□□□□□ -0.48
HPS1-208ENST00000467246 ETS1P14921 441 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 HOXA11P31270 313 aaPredicted RBP12.05□□□□□ -0.48
HPS1-208ENST00000467246 GPD2P43304 727 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 NDST1P52848 882 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 SLC25A11Q02978 314 aaKnown RBP12.05□□□□□ -0.48
HPS1-208ENST00000467246 KYNUQ16719 465 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 SPRYD7Q5W111 196 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 TRMT10CQ7L0Y3 403 aaKnown RBP12.05□□□□□ -0.48
HPS1-208ENST00000467246 NLRP14Q86W24 1093 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 CCDC89Q8N998 374 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 KIF12Q96FN5 646 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 CCT8L2Q96SF2 557 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 ADPGKQ9BRR6 497 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 CYP3A43Q9HB55 503 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 RNF19AQ9NV58 838 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 SAE1Q9UBE0 346 aaPredicted RBP12.05□□□□□ -0.48
HPS1-208ENST00000467246 ZNF148Q9UQR1 794 aa12.05□□□□□ -0.48
HPS1-208ENST00000467246 SCN4AP35499 1836 aa12.04□□□□□ -0.48
HPS1-208ENST00000467246 RASGRF2O14827 1237 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms