RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 NR2E3Q9Y5X4 410 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 ADGRA2Q96PE1 1338 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 URI1O94763 535 aaPredicted RBP5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 ARIH2O95376 493 aa5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 FTLP02792 175 aaPredicted RBP5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 HRGP04196 525 aa5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 TFF2Q03403 129 aa5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 PLS1Q14651 629 aa5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 GRM3Q14832 879 aa5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 FAM153CQ494X1 144 aa5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 GADL1Q6ZQY3 521 aa5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 HEATR3Q7Z4Q2 680 aa5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 PPP1R3BQ86XI6 285 aa5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 COL23A1Q86Y22 540 aaPredicted RBP5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 FAM9AQ8IZU1 332 aaPredicted RBP5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 Q8N9P0 234 aaPredicted RBP5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 SEMA6DQ8NFY4 1073 aa5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 SCAMP4Q969E2 229 aa5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 RFKQ969G6 155 aa5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 FAM167AQ96KS9 214 aa5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 OSBPL9Q96SU4 736 aa5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 SMOQ99835 787 aa5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 MRPL46Q9H2W6 279 aaKnown RBP5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 ATP6V0A4Q9HBG4 840 aa5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 STXBP5LQ9Y2K9 1186 aa5.66□□□□□ -1.5
PRPF40A-205ENST00000467114 A0A0B4J269 797 aa5.65□□□□□ -1.5
PRPF40A-205ENST00000467114 WDR91A4D1P6 747 aa5.65□□□□□ -1.5
PRPF40A-205ENST00000467114 LINC01548A6NM66 108 aa5.65□□□□□ -1.5
PRPF40A-205ENST00000467114 MARCH6O60337 910 aa5.65□□□□□ -1.5
PRPF40A-205ENST00000467114 SSBP2P81877 361 aaPredicted RBP5.65□□□□□ -1.5
PRPF40A-205ENST00000467114 TCF15Q12870 199 aa5.65□□□□□ -1.5
PRPF40A-205ENST00000467114 TUBB3Q13509 450 aa5.65□□□□□ -1.5
PRPF40A-205ENST00000467114 EZH2Q15910 746 aaKnown RBP5.65□□□□□ -1.5
PRPF40A-205ENST00000467114 EMC10Q5UCC4 262 aa5.65□□□□□ -1.5
PRPF40A-205ENST00000467114 RASAL3Q86YV0 1011 aa5.65□□□□□ -1.5
PRPF40A-205ENST00000467114 KLHDC4Q8TBB5 520 aa5.65□□□□□ -1.5
PRPF40A-205ENST00000467114 MRGPRX1Q96LB2 322 aa5.65□□□□□ -1.5
PRPF40A-205ENST00000467114 ALG8Q9BVK2 526 aa5.65□□□□□ -1.5
PRPF40A-205ENST00000467114 WDCPQ9H6R7 721 aa5.65□□□□□ -1.5
PRPF40A-205ENST00000467114 C1orf112Q9NSG2 853 aa5.65□□□□□ -1.5
PRPF40A-205ENST00000467114 L1RE1Q9UN81 338 aa5.65□□□□□ -1.5
PRPF40A-205ENST00000467114 VSTM5A8MXK1 200 aa5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 PROB1E7EW31 1015 aa5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 CTNND1O60716 968 aaKnown RBP5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 TTLL1O95922 423 aa5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 HTR1BP28222 390 aa5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 RAB1AP62820 205 aa5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 SLC10A2Q12908 348 aaPredicted RBP5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 LLGL1Q15334 1064 aa5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 GFOD2Q3B7J2 385 aa5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 NPNTQ6UXI9 565 aa5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 CDK5RAP3Q96JB5 506 aa5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 C1orf43Q9BWL3 253 aa5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 LMBRD1Q9NUN5 540 aa5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 PNPOQ9NVS9 261 aa5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 RLIMQ9NVW2 624 aa5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 ABCF2Q9UG63 623 aa5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 PADI4Q9UM07 663 aa5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.64□□□□□ -1.51
PRPF40A-205ENST00000467114 POLRMTO00411 1230 aaKnown RBP5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 TRIAP1O43715 76 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 RHOP08100 348 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 NDUFV1P49821 464 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 ARFIP2P53365 341 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 KIF22Q14807 665 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 SRSF7Q16629 238 aaKnown RBP eCLIP5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 ANO6Q4KMQ2 910 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 CCDC93Q567U6 631 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 BHLHA9Q7RTU4 235 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 DGKHQ86XP1 1220 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 C9orf106Q8NAJ2 232 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 FBXO41Q8TF61 875 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 SLC35A4Q96G79 324 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 B3GNT5Q9BYG0 378 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 AMBRA1Q9C0C7 1298 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 GPR35Q9HC97 309 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 DDX21Q9NR30 783 aaKnown RBP eCLIP5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 MAN1C1Q9NR34 630 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 ETAA1Q9NY74 926 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 ZNF804BA4D1E1 1349 aa5.63□□□□□ -1.51
PRPF40A-205ENST00000467114 F5H697 171 aa5.62□□□□□ -1.51
PRPF40A-205ENST00000467114 CHEK2O96017 543 aa5.62□□□□□ -1.51
PRPF40A-205ENST00000467114 MYBP10242 640 aa5.62□□□□□ -1.51
PRPF40A-205ENST00000467114 NR2F6P10588 404 aa5.62□□□□□ -1.51
PRPF40A-205ENST00000467114 DRD4P21917 467 aa5.62□□□□□ -1.51
PRPF40A-205ENST00000467114 EIF2B5Q13144 721 aaKnown RBP5.62□□□□□ -1.51
PRPF40A-205ENST00000467114 SUMO4Q6EEV6 95 aa5.62□□□□□ -1.51
PRPF40A-205ENST00000467114 CELF5Q8N6W0 485 aaKnown RBP5.62□□□□□ -1.51
PRPF40A-205ENST00000467114 FKBP10Q96AY3 582 aa5.62□□□□□ -1.51
PRPF40A-205ENST00000467114 NT5C1BQ96P26 610 aa5.62□□□□□ -1.51
PRPF40A-205ENST00000467114 BRD9Q9H8M2 597 aa5.62□□□□□ -1.51
PRPF40A-205ENST00000467114 SERTAD4Q9NUC0 356 aa5.62□□□□□ -1.51
PRPF40A-205ENST00000467114 EHD3Q9NZN3 535 aa5.62□□□□□ -1.51
PRPF40A-205ENST00000467114 ZDHHC8Q9ULC8 765 aa5.62□□□□□ -1.51
PRPF40A-205ENST00000467114 GOLGA6CA6NDK9 693 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 GOLGA6BA6NDN3 693 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 SOAT2O75908 522 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 LATS1O95835 1130 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 ZBED1O96006 694 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 GOLGA6DP0CG33 693 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms