RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 STARD7Q9NQZ5 370 aa22.37■■□□□ 1.17
PPP1R3F-203ENST00000466508 IP6K2Q9UHH9 426 aa22.37■■□□□ 1.17
PPP1R3F-203ENST00000466508 TSPAN16Q9UKR8 245 aa22.37■■□□□ 1.17
PPP1R3F-203ENST00000466508 NME7Q9Y5B8 376 aa22.37■■□□□ 1.17
PPP1R3F-203ENST00000466508 MGEA5O60502 916 aa22.36■■□□□ 1.17
PPP1R3F-203ENST00000466508 SEC31AO94979 1220 aaKnown RBP22.36■■□□□ 1.17
PPP1R3F-203ENST00000466508 LILRA4P59901 499 aa22.36■■□□□ 1.17
PPP1R3F-203ENST00000466508 PDCLQ13371 301 aa22.36■■□□□ 1.17
PPP1R3F-203ENST00000466508 DSC3Q14574 896 aa22.36■■□□□ 1.17
PPP1R3F-203ENST00000466508 SEL1L2Q5TEA6 688 aa22.36■■□□□ 1.17
PPP1R3F-203ENST00000466508 AGMOQ6ZNB7 445 aa22.36■■□□□ 1.17
PPP1R3F-203ENST00000466508 DPH6Q7L8W6 267 aa22.36■■□□□ 1.17
PPP1R3F-203ENST00000466508 LIMS2Q7Z4I7 341 aa22.36■■□□□ 1.17
PPP1R3F-203ENST00000466508 ACOT1Q86TX2 421 aa22.36■■□□□ 1.17
PPP1R3F-203ENST00000466508 C12orf29Q8N999 325 aa22.36■■□□□ 1.17
PPP1R3F-203ENST00000466508 LPPQ93052 612 aa22.36■■□□□ 1.17
PPP1R3F-203ENST00000466508 C18orf8Q96DM3 657 aa22.36■■□□□ 1.17
PPP1R3F-203ENST00000466508 MCEEQ96PE7 176 aa22.36■■□□□ 1.17
PPP1R3F-203ENST00000466508 PTPN22Q9Y2R2 807 aa22.36■■□□□ 1.17
PPP1R3F-203ENST00000466508 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.36■■□□□ 1.17
PPP1R3F-203ENST00000466508 TDRD15B5MCY1 1934 aaKnown RBP22.35■■□□□ 1.17
PPP1R3F-203ENST00000466508 ZMYND10O75800 440 aa22.35■■□□□ 1.17
PPP1R3F-203ENST00000466508 PYGMP11217 842 aa22.35■■□□□ 1.17
PPP1R3F-203ENST00000466508 MRPS25P82663 173 aaKnown RBP22.35■■□□□ 1.17
PPP1R3F-203ENST00000466508 SLC7A5Q01650 507 aa22.35■■□□□ 1.17
PPP1R3F-203ENST00000466508 DCUN1D2Q6PH85 259 aa22.35■■□□□ 1.17
PPP1R3F-203ENST00000466508 KLHL7Q8IXQ5 586 aa22.35■■□□□ 1.17
PPP1R3F-203ENST00000466508 APPL2Q8NEU8 664 aa22.35■■□□□ 1.17
PPP1R3F-203ENST00000466508 OR6B3Q8NGW1 331 aa22.35■■□□□ 1.17
PPP1R3F-203ENST00000466508 KBTBD7Q8WVZ9 684 aa22.35■■□□□ 1.17
PPP1R3F-203ENST00000466508 TRPV6Q9H1D0 765 aa22.35■■□□□ 1.17
PPP1R3F-203ENST00000466508 WDR35Q9P2L0 1181 aa22.35■■□□□ 1.17
PPP1R3F-203ENST00000466508 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.35■■□□□ 1.17
PPP1R3F-203ENST00000466508 A0A0U1RQF3 1178 aa22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 A0A0U1RQG5 324 aaPredicted RBP22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 ARL5CA6NH57 179 aa22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 THP07101 528 aa22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 CKBP12277 381 aa22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 BEND6Q5SZJ8 279 aaPredicted RBP22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 PLVAPQ9BX97 442 aa22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 SYNCQ9H7C4 482 aa22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 TJP2Q9UDY2 1190 aa22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 A8MXQ7 604 aa22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 PSTPIP1O43586 416 aa22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 GABRB2P47870 512 aa22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 PPP1R26Q5T8A7 1209 aaPredicted RBP22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 AADACL2Q6P093 401 aa22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 TSPYL2Q9H2G4 693 aaPredicted RBP22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 L1RE1Q9UN81 338 aa22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 PHF24Q9UPV7 400 aa22.34■■□□□ 1.17
PPP1R3F-203ENST00000466508 GOLGA6L10A0A0M3HER8 536 aa22.33■■□□□ 1.17
PPP1R3F-203ENST00000466508 SART1O43290 800 aaKnown RBP22.33■■□□□ 1.17
PPP1R3F-203ENST00000466508 HUS1O60921 280 aa22.33■■□□□ 1.17
PPP1R3F-203ENST00000466508 ERBB2P04626 1255 aa22.33■■□□□ 1.17
PPP1R3F-203ENST00000466508 AFF1P51825 1210 aaKnown RBP22.33■■□□□ 1.17
PPP1R3F-203ENST00000466508 PSMC1P62191 440 aaKnown RBP22.33■■□□□ 1.17
PPP1R3F-203ENST00000466508 ZNF252P-AS1Q0IIN9 211 aa22.33■■□□□ 1.17
PPP1R3F-203ENST00000466508 GOLGA7BQ2TAP0 167 aa22.33■■□□□ 1.17
PPP1R3F-203ENST00000466508 MAP9Q49MG5 647 aa22.33■■□□□ 1.17
PPP1R3F-203ENST00000466508 XYLT1Q86Y38 959 aa22.33■■□□□ 1.17
PPP1R3F-203ENST00000466508 TOP6BLQ8N6T0 577 aa22.33■■□□□ 1.17
PPP1R3F-203ENST00000466508 UBA3Q8TBC4 463 aa22.33■■□□□ 1.17
PPP1R3F-203ENST00000466508 ADAM2Q99965 735 aa22.33■■□□□ 1.17
PPP1R3F-203ENST00000466508 DDX47Q9H0S4 455 aaKnown RBP22.33■■□□□ 1.17
PPP1R3F-203ENST00000466508 SLITRK6Q9H5Y7 841 aa22.33■■□□□ 1.17
PPP1R3F-203ENST00000466508 SIGLEC16A6NMB1 481 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 KBTBD13C9JR72 458 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 RAD51CO43502 376 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 FGFR1P11362 822 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 GNL1P36915 607 aaPredicted RBP22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 ZNF268Q14587 947 aaPredicted RBP22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 PPP2R5EQ16537 467 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 DAB2IPQ5VWQ8 1189 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 CCNI2Q6ZMN8 369 aaPredicted RBP22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 RHOT1Q8IXI2 618 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 IPO4Q8TEX9 1081 aaKnown RBP22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 SH3TC2Q8TF17 1288 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 DDX27Q96GQ7 796 aaKnown RBP22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 SNX25Q9H3E2 840 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 ARVCFO00192 962 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 ATP8B1O43520 1251 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 HEXIM1O94992 359 aaKnown RBP22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 PFKMP08237 780 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 KRT3P12035 628 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 SKIP12755 728 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 SCNN1GP51170 649 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 PIGHQ14442 188 aaPredicted RBP22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 PKDCCQ504Y2 493 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 ARHGAP17Q68EM7 881 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 TRAF7Q6Q0C0 670 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 ADGRF2Q8IZF7 708 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 CRYBG2Q8N1P7 616 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 NIPA2Q8N8Q9 360 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 DNAI2Q9GZS0 605 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 DPEP3Q9H4B8 488 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 FAM49BQ9NUQ9 324 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 MIOSQ9NXC5 875 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 NR2E1Q9Y466 385 aa22.32■■□□□ 1.16
PPP1R3F-203ENST00000466508 GOLGA8SH3BPF8 625 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms