RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 TIMM13Q9Y5L4 95 aaPredicted RBP16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 PLXND1Q9Y4D7 1925 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 MYO18BQ8IUG5 2567 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 HECTD1Q9ULT8 2610 aa16■□□□□ 0.15
HMGXB4-206ENST00000466438 DDX6P26196 483 aaKnown RBP eCLIP16■□□□□ 0.15
HMGXB4-206ENST00000466438 BYSLQ13895 437 aaKnown RBP16■□□□□ 0.15
HMGXB4-206ENST00000466438 PPP2R5AQ15172 486 aa16■□□□□ 0.15
HMGXB4-206ENST00000466438 TMPRSS7Q7RTY8 843 aa16■□□□□ 0.15
HMGXB4-206ENST00000466438 GLRX5Q86SX6 157 aa16■□□□□ 0.15
HMGXB4-206ENST00000466438 USP37Q86T82 979 aa16■□□□□ 0.15
HMGXB4-206ENST00000466438 FRMD1Q8N878 549 aa16■□□□□ 0.15
HMGXB4-206ENST00000466438 MAB21L3Q8N8X9 362 aa16■□□□□ 0.15
HMGXB4-206ENST00000466438 JAKMIP1Q96N16 626 aaKnown RBP16■□□□□ 0.15
HMGXB4-206ENST00000466438 NACC1Q96RE7 527 aa16■□□□□ 0.15
HMGXB4-206ENST00000466438 CDT1Q9H211 546 aa16■□□□□ 0.15
HMGXB4-206ENST00000466438 A0A087WWV3 80 aa15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 GJB3O75712 270 aa15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 DEXIO95424 95 aa15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 LARGE1O95461 756 aa15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 SYPP08247 313 aa15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 TUFMP49411 452 aaKnown RBP15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 NEK4P51957 841 aa15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 SEC13P55735 322 aa15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 CYP4F3Q08477 520 aa15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 ZNF268Q14587 947 aaPredicted RBP15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 MAP7D1Q3KQU3 841 aa15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 ZNF568Q3ZCX4 644 aa15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 TMEM92Q6UXU6 159 aa15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 CCDC33Q8N5R6 958 aa15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 ATP2A3Q93084 1043 aa15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 ACAP3Q96P50 834 aa15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 KIFC3Q9BVG8 833 aa15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 NCOA5Q9HCD5 579 aaKnown RBP15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 KIAA1522Q9P206 1035 aaPredicted RBP15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 PCDHA12Q9UN75 941 aa15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 CYP46A1Q9Y6A2 500 aa15.99■□□□□ 0.15
HMGXB4-206ENST00000466438 K7ELQ4 463 aaPredicted RBP15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 K7EQS6 105 aa15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 CITO14578 2027 aa15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 AP5Z1O43299 807 aa15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 HNRNPLP14866 589 aaKnown RBP eCLIP15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 CPA1P15085 419 aa15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 ATF6P18850 670 aa15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 SSRP1Q08945 709 aaKnown RBP15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 NBR1Q14596 966 aa15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 MTF1Q14872 753 aa15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 TAF12Q16514 161 aa15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 BLOC1S2Q6QNY1 142 aa15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 TMEM150AQ86TG1 271 aa15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 SLCO6A1Q86UG4 719 aa15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 PIP4K2CQ8TBX8 421 aa15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 OSCP1Q8WVF1 389 aa15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 SEPT5Q99719 369 aaPredicted RBP15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 DUS2Q9NX74 493 aaKnown RBP15.98■□□□□ 0.15
HMGXB4-206ENST00000466438 ZNF638Q14966 1978 aaKnown RBP15.97■□□□□ 0.15
HMGXB4-206ENST00000466438 IFNAR2P48551 515 aa15.97■□□□□ 0.15
HMGXB4-206ENST00000466438 AARSP49588 968 aaKnown RBP eCLIP15.97■□□□□ 0.15
HMGXB4-206ENST00000466438 CCT2P78371 535 aaKnown RBP15.97■□□□□ 0.15
HMGXB4-206ENST00000466438 MRPS21P82921 87 aaKnown RBP15.97■□□□□ 0.15
HMGXB4-206ENST00000466438 NR1H3Q13133 447 aa15.97■□□□□ 0.15
HMGXB4-206ENST00000466438 OVOS1Q6IE37 1185 aa15.97■□□□□ 0.15
HMGXB4-206ENST00000466438 ARMCX5Q6P1M9 558 aa15.97■□□□□ 0.15
HMGXB4-206ENST00000466438 RUFY3Q7L099 469 aa15.97■□□□□ 0.15
HMGXB4-206ENST00000466438 FBXL16Q8N461 479 aa15.97■□□□□ 0.15
HMGXB4-206ENST00000466438 ZSWIM6Q9HCJ5 1215 aa15.97■□□□□ 0.15
HMGXB4-206ENST00000466438 PTPRHQ9HD43 1115 aa15.97■□□□□ 0.15
HMGXB4-206ENST00000466438 BCCIPQ9P287 314 aaKnown RBP eCLIP15.97■□□□□ 0.15
HMGXB4-206ENST00000466438 TUBGCP4Q9UGJ1 667 aa15.97■□□□□ 0.15
HMGXB4-206ENST00000466438 DENND4CQ5VZ89 1909 aa15.97■□□□□ 0.15
HMGXB4-206ENST00000466438 TRABD2BA6NFA1 517 aa15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 CBFA2T3O75081 653 aa15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 F11P03951 625 aa15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 CYP11B2P19099 503 aa15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 NMT1P30419 496 aaKnown RBP15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 NLRP12P59046 1061 aa15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 RPL6Q02878 288 aaKnown RBP15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 ANKRD1Q15327 319 aa15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 EML3Q32P44 896 aa15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 MGAT5BQ3V5L5 792 aa15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 TXNDC8Q6A555 127 aa15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 PIK3AP1Q6ZUJ8 805 aa15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 IFT74Q96LB3 600 aa15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 AIFM3Q96NN9 605 aa15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 ACO2Q99798 780 aaKnown RBP15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 AGXT2Q9BYV1 514 aa15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 PRORYQ9H606 182 aa15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 TTC12Q9H892 705 aaPredicted RBP15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 WNT6Q9Y6F9 365 aa15.96■□□□□ 0.15
HMGXB4-206ENST00000466438 ANTXRLA6NF34 631 aa15.95■□□□□ 0.14
HMGXB4-206ENST00000466438 CAPN8A6NHC0 703 aa15.95■□□□□ 0.14
HMGXB4-206ENST00000466438 K7ERI5 159 aa15.95■□□□□ 0.14
HMGXB4-206ENST00000466438 CAPN9O14815 690 aa15.95■□□□□ 0.14
HMGXB4-206ENST00000466438 ARHGAP6O43182 974 aa15.95■□□□□ 0.14
HMGXB4-206ENST00000466438 MCF2P10911 925 aa15.95■□□□□ 0.14
HMGXB4-206ENST00000466438 TYMPP19971 482 aa15.95■□□□□ 0.14
HMGXB4-206ENST00000466438 PDIA3P30101 505 aaKnown RBP15.95■□□□□ 0.14
HMGXB4-206ENST00000466438 LRPAP1P30533 357 aa15.95■□□□□ 0.14
HMGXB4-206ENST00000466438 FAM160A1Q05DH4 1040 aa15.95■□□□□ 0.14
HMGXB4-206ENST00000466438 ZNF33AQ06730 810 aa15.95■□□□□ 0.14
HMGXB4-206ENST00000466438 ZNF77Q15935 545 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms