RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 TSSK4Q6SA08 328 aa13.41□□□□□ -0.26
SOX2-OT-203ENST00000466034 STXBP4Q6ZWJ1 553 aa13.41□□□□□ -0.26
SOX2-OT-203ENST00000466034 GPD1LQ8N335 351 aa13.41□□□□□ -0.26
SOX2-OT-203ENST00000466034 PDCL2Q8N4E4 241 aa13.41□□□□□ -0.26
SOX2-OT-203ENST00000466034 TOP6BLQ8N6T0 577 aa13.41□□□□□ -0.26
SOX2-OT-203ENST00000466034 BPIFB1Q8TDL5 484 aa13.41□□□□□ -0.26
SOX2-OT-203ENST00000466034 PKMYT1Q99640 499 aa13.41□□□□□ -0.26
SOX2-OT-203ENST00000466034 PANK2Q9BZ23 570 aa13.41□□□□□ -0.26
SOX2-OT-203ENST00000466034 ABCB6Q9NP58 842 aa13.41□□□□□ -0.26
SOX2-OT-203ENST00000466034 TMLHEQ9NVH6 421 aa13.41□□□□□ -0.26
SOX2-OT-203ENST00000466034 KBTBD4Q9NVX7 518 aa13.41□□□□□ -0.26
SOX2-OT-203ENST00000466034 ABI2Q9NYB9 513 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-203ENST00000466034 SMG5Q9UPR3 1016 aaKnown RBP13.41□□□□□ -0.26
SOX2-OT-203ENST00000466034 OBSL1O75147 1896 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 GOLGA8IPA6NC78 632 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 GOLGA8JA6NMD2 632 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 SPECC1L-ADORA2AF8WAN1 911 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 GABRDO14764 452 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 SPTLC2O15270 562 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 PRPF6O94906 941 aaKnown RBP13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 CSH1P0DML2 217 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 CSH2P0DML3 217 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 CD44P16070 742 aaKnown RBP13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 CTHP32929 405 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 KPNA1P52294 538 aaPredicted RBP13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 NLRP12P59046 1061 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 RBP5P82980 135 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 MYL7Q01449 175 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 GAS6Q14393 721 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 SURF1Q15526 300 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 TAF12Q16514 161 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 INTS6LQ5JSJ4 861 aaKnown RBP13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 DGKKQ5KSL6 1271 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 DPH6Q7L8W6 267 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 LIMS2Q7Z4I7 341 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 TMEM150AQ86TG1 271 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 KIAA2013Q8IYS2 634 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 CMTM8Q8IZV2 173 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 SPEM1Q8N4L4 309 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 DCLK2Q8N568 766 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 CSGALNACT2Q8N6G5 542 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 GPR161Q8N6U8 529 aaKnown RBP13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 CELF5Q8N6W0 485 aaKnown RBP13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 PDILTQ8N807 584 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 GIPC2Q8TF65 315 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 ZNF396Q96N95 335 aaPredicted RBP13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 HINFPQ9BQA5 517 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 SLC46A2Q9BY10 475 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 PCIF1Q9H4Z3 704 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 PDE11AQ9HCR9 933 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 SIX4Q9UIU6 781 aa13.4□□□□□ -0.26
SOX2-OT-203ENST00000466034 SLC38A8A6NNN8 435 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 EIF3DO15371 548 aaKnown RBP eCLIP13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 PRPF40AO75400 957 aaKnown RBP13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 YEATS4O95619 227 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 TMEM191BP0C7N4 346 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 PDIA4P13667 645 aaKnown RBP13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 CXCL12P48061 93 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 SOX9P48436 509 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 LHX1P48742 406 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 AMPD3Q01432 767 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 BFSP1Q12934 665 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 WDR44Q5JSH3 913 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 TXNDC11Q6PKC3 985 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 OSTM1Q86WC4 334 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 SYNPOQ8N3V7 929 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 SECISBP2LQ93073 1101 aaKnown RBP13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 SNX21Q969T3 373 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 RMDN1Q96DB5 314 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 TRMT2BQ96GJ1 504 aaKnown RBP13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 FUBP3Q96I24 572 aaKnown RBP eCLIP13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 ANKRD36BP1Q96IX9 119 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 PI4K2AQ9BTU6 479 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 TRIM9Q9C026 710 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 MTMR12Q9C0I1 747 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 KIF9Q9HAQ2 790 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 INTS13Q9NVM9 706 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 THG1LQ9NWX6 298 aaKnown RBP13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 DDX43Q9NXZ2 648 aaKnown RBP13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 GTSE1Q9NYZ3 720 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 NCDNQ9UBB6 729 aa13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 UXTQ9UBK9 157 aaPredicted RBP13.39□□□□□ -0.27
SOX2-OT-203ENST00000466034 ZNF638Q14966 1978 aaKnown RBP13.38□□□□□ -0.27
SOX2-OT-203ENST00000466034 ZNF233A6NK53 670 aa13.38□□□□□ -0.27
SOX2-OT-203ENST00000466034 CUTAO60888 179 aa13.38□□□□□ -0.27
SOX2-OT-203ENST00000466034 NOL4O94818 638 aa13.38□□□□□ -0.27
SOX2-OT-203ENST00000466034 PRKCSHP14314 528 aaPredicted RBP13.38□□□□□ -0.27
SOX2-OT-203ENST00000466034 PCSK1P29120 753 aa13.38□□□□□ -0.27
SOX2-OT-203ENST00000466034 HOXD13P35453 343 aa13.38□□□□□ -0.27
SOX2-OT-203ENST00000466034 RPL10AP62906 217 aaKnown RBP13.38□□□□□ -0.27
SOX2-OT-203ENST00000466034 SATB1Q01826 763 aa13.38□□□□□ -0.27
SOX2-OT-203ENST00000466034 CCINQ13939 588 aa13.38□□□□□ -0.27
SOX2-OT-203ENST00000466034 ZNF268Q14587 947 aaPredicted RBP13.38□□□□□ -0.27
SOX2-OT-203ENST00000466034 PUM1Q14671 1186 aaKnown RBP eCLIP13.38□□□□□ -0.27
SOX2-OT-203ENST00000466034 ITPRIPL2Q3MIP1 535 aa13.38□□□□□ -0.27
SOX2-OT-203ENST00000466034 CFAP221Q4G0U5 840 aa13.38□□□□□ -0.27
SOX2-OT-203ENST00000466034 SCARA3Q6AZY7 606 aa13.38□□□□□ -0.27
SOX2-OT-203ENST00000466034 EPM2AIP1Q7L775 607 aaPredicted RBP13.38□□□□□ -0.27
SOX2-OT-203ENST00000466034 MON1AQ86VX9 555 aa13.38□□□□□ -0.27
SOX2-OT-203ENST00000466034 GPIHBP1Q8IV16 184 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms