RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 CSPG5O95196 566 aa18.3■□□□□ 0.52
PTPRU-206ENST00000465525 OR4Q2P0C623 313 aa18.3■□□□□ 0.52
PTPRU-206ENST00000465525 CCDC130P13994 396 aa18.3■□□□□ 0.52
PTPRU-206ENST00000465525 FGFR3P22607 806 aa18.3■□□□□ 0.52
PTPRU-206ENST00000465525 PLCB3Q01970 1234 aa18.3■□□□□ 0.52
PTPRU-206ENST00000465525 CYP27A1Q02318 531 aa18.3■□□□□ 0.52
PTPRU-206ENST00000465525 ASTE1Q2TB18 679 aaPredicted RBP18.3■□□□□ 0.52
PTPRU-206ENST00000465525 PPP2R2DQ66LE6 453 aa18.3■□□□□ 0.52
PTPRU-206ENST00000465525 KLHL23Q8NBE8 558 aa18.3■□□□□ 0.52
PTPRU-206ENST00000465525 ACRBPQ8NEB7 543 aa18.3■□□□□ 0.52
PTPRU-206ENST00000465525 CRTAC1Q9NQ79 661 aa18.3■□□□□ 0.52
PTPRU-206ENST00000465525 SSU72P8A0A1W2PR75 194 aa18.29■□□□□ 0.52
PTPRU-206ENST00000465525 ARHGEF37A1IGU5 675 aa18.29■□□□□ 0.52
PTPRU-206ENST00000465525 TMCO5BA8MYB1 307 aa18.29■□□□□ 0.52
PTPRU-206ENST00000465525 SYN3O14994 580 aa18.29■□□□□ 0.52
PTPRU-206ENST00000465525 ARHGAP6O43182 974 aa18.29■□□□□ 0.52
PTPRU-206ENST00000465525 FGF18O76093 207 aa18.29■□□□□ 0.52
PTPRU-206ENST00000465525 NDUFA10O95299 355 aa18.29■□□□□ 0.52
PTPRU-206ENST00000465525 EFEMP2O95967 443 aa18.29■□□□□ 0.52
PTPRU-206ENST00000465525 PTPN1P18031 435 aaKnown RBP18.29■□□□□ 0.52
PTPRU-206ENST00000465525 ADORA2BP29275 332 aa18.29■□□□□ 0.52
PTPRU-206ENST00000465525 SGO2Q562F6 1265 aa18.29■□□□□ 0.52
PTPRU-206ENST00000465525 MDH1BQ5I0G3 518 aa18.29■□□□□ 0.52
PTPRU-206ENST00000465525 PPP1R26Q5T8A7 1209 aaPredicted RBP18.29■□□□□ 0.52
PTPRU-206ENST00000465525 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.29■□□□□ 0.52
PTPRU-206ENST00000465525 CRYBG2Q8N1P7 616 aa18.29■□□□□ 0.52
PTPRU-206ENST00000465525 B3GALNT2Q8NCR0 500 aa18.29■□□□□ 0.52
PTPRU-206ENST00000465525 TIFAQ96CG3 184 aa18.29■□□□□ 0.52
PTPRU-206ENST00000465525 TTPALQ9BTX7 342 aa18.29■□□□□ 0.52
PTPRU-206ENST00000465525 PDCL3Q9H2J4 239 aa18.29■□□□□ 0.52
PTPRU-206ENST00000465525 FAM124BQ9H5Z6 455 aaPredicted RBP18.29■□□□□ 0.52
PTPRU-206ENST00000465525 EPN1Q9Y6I3 576 aaPredicted RBP18.29■□□□□ 0.52
PTPRU-206ENST00000465525 MYBPHLA2RUH7 354 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 ZNF263O14978 683 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 FAM163BP0C2L3 166 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 VDRP11473 427 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 GOLGA7BQ2TAP0 167 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 CTXN3Q4LDR2 81 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 DENND1BQ6P3S1 775 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 DDX53Q86TM3 631 aaKnown RBP18.28■□□□□ 0.52
PTPRU-206ENST00000465525 THEM5Q8N1Q8 247 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 AUTS2Q8WXX7 1259 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 RIN2Q8WYP3 895 aaPredicted RBP18.28■□□□□ 0.52
PTPRU-206ENST00000465525 C11orf84Q9BUA3 381 aaPredicted RBP18.28■□□□□ 0.52
PTPRU-206ENST00000465525 TAS2R14Q9NYV8 317 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 GTF3C4Q9UKN8 822 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 O00370 1275 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 CLDN5O00501 218 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 OAZ2O95190 189 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 PCSK1P29120 753 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 CYLC1P35663 651 aaPredicted RBP18.28■□□□□ 0.52
PTPRU-206ENST00000465525 ARPP19P56211 112 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 LRRTM3Q86VH5 581 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 VPS36Q86VN1 386 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 CCDC170Q8IYT3 715 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 RNF168Q8IYW5 571 aaPredicted RBP18.28■□□□□ 0.52
PTPRU-206ENST00000465525 C17orf53Q8N3J3 647 aaPredicted RBP18.28■□□□□ 0.52
PTPRU-206ENST00000465525 SLC30A5Q8TAD4 765 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 UBA3Q8TBC4 463 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 TNIP3Q96KP6 325 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 TMLHEQ9NVH6 421 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 CDH9Q9ULB4 789 aa18.28■□□□□ 0.52
PTPRU-206ENST00000465525 REXO2Q9Y3B8 237 aaKnown RBP18.28■□□□□ 0.52
PTPRU-206ENST00000465525 LAMA3Q16787 3333 aa18.27■□□□□ 0.52
PTPRU-206ENST00000465525 MICAL2O94851 1124 aa18.27■□□□□ 0.52
PTPRU-206ENST00000465525 RPL17P18621 184 aaKnown RBP18.27■□□□□ 0.52
PTPRU-206ENST00000465525 SLC18A3Q16572 532 aa18.27■□□□□ 0.52
PTPRU-206ENST00000465525 USP41Q3LFD5 358 aa18.27■□□□□ 0.52
PTPRU-206ENST00000465525 INTS6LQ5JSJ4 861 aaKnown RBP18.27■□□□□ 0.52
PTPRU-206ENST00000465525 KIAA1841Q6NSI8 718 aa18.27■□□□□ 0.52
PTPRU-206ENST00000465525 RSPO2Q6UXX9 243 aaPredicted RBP18.27■□□□□ 0.52
PTPRU-206ENST00000465525 VPS52Q8N1B4 723 aa18.27■□□□□ 0.52
PTPRU-206ENST00000465525 SLC2A14Q8TDB8 520 aa18.27■□□□□ 0.52
PTPRU-206ENST00000465525 CYFIP2Q96F07 1278 aa18.27■□□□□ 0.52
PTPRU-206ENST00000465525 ACBD6Q9BR61 282 aa18.27■□□□□ 0.52
PTPRU-206ENST00000465525 RHOBTB2Q9BYZ6 727 aa18.27■□□□□ 0.52
PTPRU-206ENST00000465525 ALG13Q9NP73 1137 aaKnown RBP18.27■□□□□ 0.52
PTPRU-206ENST00000465525 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.27■□□□□ 0.52
PTPRU-206ENST00000465525 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.27■□□□□ 0.52
PTPRU-206ENST00000465525 TFR2Q9UP52 801 aa18.27■□□□□ 0.52
PTPRU-206ENST00000465525 LZTS1Q9Y250 596 aa18.27■□□□□ 0.52
PTPRU-206ENST00000465525 CHD9Q3L8U1 2897 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 A0A0U1RQJ8 604 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 M0QYV0 167 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 MED7O43513 233 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 SOD2P04179 222 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 UBE3AQ05086 875 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 MRPL58Q14197 206 aaKnown RBP18.26■□□□□ 0.51
PTPRU-206ENST00000465525 BMS1Q14692 1282 aaKnown RBP18.26■□□□□ 0.51
PTPRU-206ENST00000465525 HS1BP3Q53T59 392 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 CCDC122Q5T0U0 273 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 NAA35Q5VZE5 725 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 ZNF677Q86XU0 584 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 FBXO22Q8NEZ5 403 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 SPATA18Q8TC71 538 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 ATRIPQ8WXE1 791 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 CPA5Q8WXQ8 436 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 MED10Q9BTT4 135 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 HERC2P3Q9BVR0 1158 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 B3GNT5Q9BYG0 378 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms