RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 GRIA3P42263 894 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 TNNT2P45379 298 aaPredicted RBP3.8□□□□□ -1.8
SNX4-202ENST00000465505 ABCG1P45844 678 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 NAP1L1P55209 391 aaKnown RBP3.8□□□□□ -1.8
SNX4-202ENST00000465505 FPGSQ05932 587 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 TARDBPQ13148 414 aaKnown RBP eCLIP3.8□□□□□ -1.8
SNX4-202ENST00000465505 DYRK1AQ13627 763 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 HLTFQ14527 1009 aaKnown RBP eCLIP3.8□□□□□ -1.8
SNX4-202ENST00000465505 TAF11Q15544 211 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 FAM133BQ5BKY9 247 aaKnown RBP3.8□□□□□ -1.8
SNX4-202ENST00000465505 AKNAD1Q5T1N1 836 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 RNF219Q5W0B1 726 aaPredicted RBP3.8□□□□□ -1.8
SNX4-202ENST00000465505 C16orf87Q6PH81 154 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 ZNF788Q6ZQV5 615 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 GRASPQ7Z6J2 395 aaPredicted RBP3.8□□□□□ -1.8
SNX4-202ENST00000465505 MTERF4Q7Z6M4 381 aaKnown RBP3.8□□□□□ -1.8
SNX4-202ENST00000465505 CLNKQ7Z7G1 428 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 LCA5Q86VQ0 697 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 TTC30AQ86WT1 665 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 MYO1HQ8N1T3 1032 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 ARL6IP6Q8N6S5 226 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 NKAIN3Q8N8D7 197 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 IL17RDQ8NFM7 739 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 SLC30A5Q8TAD4 765 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 SMCR8Q8TEV9 937 aaPredicted RBP3.8□□□□□ -1.8
SNX4-202ENST00000465505 MAP3K14Q99558 947 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 NCAPGQ9BPX3 1015 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 FAM167BQ9BTA0 163 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 KMT5AQ9NQR1 393 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 DONSONQ9NYP3 566 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 CTTNBP2NLQ9P2B4 639 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 XPO7Q9UIA9 1087 aaKnown RBP3.8□□□□□ -1.8
SNX4-202ENST00000465505 RAD50Q92878 1312 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 A0A1W2PRQ8 180 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 WIPF3A6NGB9 483 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 FAM25EA8MYX2 175 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 GRM6O15303 877 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 PLIN1O60240 522 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 CAND2O75155 1236 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 SUN1O94901 812 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 MTHFD1P11586 935 aaKnown RBP3.79□□□□□ -1.8
SNX4-202ENST00000465505 HOXD10P28358 340 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 HOXC13P31276 330 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 PIK3CAP42336 1068 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 TRAPPC10P48553 1259 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 MAPK10P53779 464 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 RPS7P62081 194 aaKnown RBP3.79□□□□□ -1.8
SNX4-202ENST00000465505 SRSF4Q08170 494 aaKnown RBP3.79□□□□□ -1.8
SNX4-202ENST00000465505 KLF1Q13351 362 aaPredicted RBP3.79□□□□□ -1.8
SNX4-202ENST00000465505 PTPRRQ15256 657 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 E2F5Q15329 346 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 ATP2B3Q16720 1220 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 INAVAQ3KP66 663 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 CD300EQ496F6 205 aaPredicted RBP3.79□□□□□ -1.8
SNX4-202ENST00000465505 PABPC1LQ4VXU2 614 aaKnown RBP3.79□□□□□ -1.8
SNX4-202ENST00000465505 TTLL5Q6EMB2 1281 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 PEG10Q86TG7 708 aaKnown RBP3.79□□□□□ -1.8
SNX4-202ENST00000465505 MNS1Q8NEH6 495 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 IFI44Q8TCB0 444 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 TFAP2BQ92481 460 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 LPIN2Q92539 896 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 TMEM125Q96AQ2 219 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 LRIG1Q96JA1 1093 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 ZNF396Q96N95 335 aaPredicted RBP3.79□□□□□ -1.8
SNX4-202ENST00000465505 IWS1Q96ST2 819 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 FAM126AQ9BYI3 521 aaPredicted RBP3.79□□□□□ -1.8
SNX4-202ENST00000465505 ARNT2Q9HBZ2 717 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 CPNE5Q9HCH3 593 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 MED4Q9NPJ6 270 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 COMMD8Q9NX08 183 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 DCAF16Q9NXF7 216 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 ISY1Q9ULR0 285 aaKnown RBP3.79□□□□□ -1.8
SNX4-202ENST00000465505 PCDHA13Q9Y5I0 950 aa3.79□□□□□ -1.8
SNX4-202ENST00000465505 ANKRD18BA2A2Z9 1011 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 PRRT4C9JH25 899 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 ADM5C9JUS6 153 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 ORC4O43929 436 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 SLC43A1O75387 559 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 BAIAP3O94812 1187 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 RRM1P23921 792 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 ITPKBP27987 946 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 STIP1P31948 543 aaKnown RBP3.78□□□□□ -1.8
SNX4-202ENST00000465505 HNRNPMP52272 730 aaKnown RBP eCLIP3.78□□□□□ -1.8
SNX4-202ENST00000465505 NBPF8Q3BBV2 869 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 FLYWCH1Q4VC44 716 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 INO80DQ53TQ3 878 aaPredicted RBP3.78□□□□□ -1.8
SNX4-202ENST00000465505 CCDC158Q5M9N0 1113 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 ODR4Q5SWX8 454 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 TMPRSS9Q7Z410 1059 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 NSUN7Q8NE18 718 aaKnown RBP3.78□□□□□ -1.8
SNX4-202ENST00000465505 APPL2Q8NEU8 664 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 SSH1Q8WYL5 1049 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 RAB24Q969Q5 203 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 CENPTQ96BT3 561 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 SARAFQ96BY9 339 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 FBXL20Q96IG2 436 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 CDK5RAP3Q96JB5 506 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 TMX3Q96JJ7 454 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 PGBD1Q96JS3 809 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 KLHL32Q96NJ5 620 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms