RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 SOWAHBA6NEL2 793 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 MED7O43513 233 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 KRT19P08727 400 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 KRT7P08729 469 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 HOXC6P09630 235 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 PDIA2Q13087 525 aaKnown RBP19.29■□□□□ 0.68
SYNE4-204ENST00000465425 HADHQ16836 314 aaKnown RBP19.29■□□□□ 0.68
SYNE4-204ENST00000465425 SMTNL2Q2TAL5 461 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 PCGF5Q86SE9 256 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.29■□□□□ 0.68
SYNE4-204ENST00000465425 SMC6Q96SB8 1091 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 SYNCQ9H7C4 482 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 ECT2Q9H8V3 914 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 SENP1Q9P0U3 644 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 AGAP1Q9UPQ3 857 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 PPP2R3BQ9Y5P8 575 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 SPAG7O75391 227 aa19.28■□□□□ 0.68
SYNE4-204ENST00000465425 SLC8A1P32418 973 aa19.28■□□□□ 0.68
SYNE4-204ENST00000465425 RFC1P35251 1148 aaPredicted RBP19.28■□□□□ 0.68
SYNE4-204ENST00000465425 MTFR1Q15390 333 aa19.28■□□□□ 0.68
SYNE4-204ENST00000465425 MPZL3Q6UWV2 235 aa19.28■□□□□ 0.68
SYNE4-204ENST00000465425 TRIM50Q86XT4 487 aa19.28■□□□□ 0.68
SYNE4-204ENST00000465425 RXFP1Q9HBX9 757 aa19.28■□□□□ 0.68
SYNE4-204ENST00000465425 BAIAP2L1Q9UHR4 511 aa19.28■□□□□ 0.68
SYNE4-204ENST00000465425 INO80B-WBP1J3KQ70 363 aa19.28■□□□□ 0.68
SYNE4-204ENST00000465425 GCAP28676 217 aa19.28■□□□□ 0.68
SYNE4-204ENST00000465425 HIF1AQ16665 826 aa19.28■□□□□ 0.68
SYNE4-204ENST00000465425 PTPN20Q4JDL3 420 aa19.28■□□□□ 0.68
SYNE4-204ENST00000465425 TTC13Q8NBP0 860 aa19.28■□□□□ 0.68
SYNE4-204ENST00000465425 NLRP4Q96MN2 994 aa19.28■□□□□ 0.68
SYNE4-204ENST00000465425 INO80BQ9C086 356 aaPredicted RBP19.28■□□□□ 0.68
SYNE4-204ENST00000465425 SPATC1LQ9H0A9 340 aa19.28■□□□□ 0.68
SYNE4-204ENST00000465425 XYLT2Q9H1B5 865 aa19.28■□□□□ 0.68
SYNE4-204ENST00000465425 TRABDQ9H4I3 376 aa19.28■□□□□ 0.68
SYNE4-204ENST00000465425 PPCSQ9HAB8 311 aa19.28■□□□□ 0.68
SYNE4-204ENST00000465425 GOLGA8MH3BSY2 632 aa19.27■□□□□ 0.68
SYNE4-204ENST00000465425 ALOX15BO15296 676 aa19.27■□□□□ 0.68
SYNE4-204ENST00000465425 ATP6V1G2O95670 118 aa19.27■□□□□ 0.68
SYNE4-204ENST00000465425 TAC1P20366 129 aa19.27■□□□□ 0.68
SYNE4-204ENST00000465425 KCNT1Q5JUK3 1230 aa19.27■□□□□ 0.68
SYNE4-204ENST00000465425 ATF7IP2Q5U623 682 aa19.27■□□□□ 0.68
SYNE4-204ENST00000465425 DENND1BQ6P3S1 775 aa19.27■□□□□ 0.68
SYNE4-204ENST00000465425 FAM47EQ6ZV65 393 aa19.27■□□□□ 0.68
SYNE4-204ENST00000465425 MAGEC3Q8TD91 643 aa19.27■□□□□ 0.68
SYNE4-204ENST00000465425 MRRFQ96E11 262 aaKnown RBP19.27■□□□□ 0.68
SYNE4-204ENST00000465425 MPHOSPH6Q99547 160 aaKnown RBP19.27■□□□□ 0.68
SYNE4-204ENST00000465425 PRKAG3Q9UGI9 489 aa19.27■□□□□ 0.68
SYNE4-204ENST00000465425 SMG5Q9UPR3 1016 aaKnown RBP19.27■□□□□ 0.68
SYNE4-204ENST00000465425 LOC285556D6RIA3 1793 aa19.27■□□□□ 0.67
SYNE4-204ENST00000465425 LTBP3Q9NS15 1303 aa19.27■□□□□ 0.67
SYNE4-204ENST00000465425 SIGLEC16A6NMB1 481 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 ABLIM1O14639 778 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 CTCFP49711 727 aaPredicted RBP19.26■□□□□ 0.67
SYNE4-204ENST00000465425 NCALDP61601 193 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 PSMC1P62191 440 aaKnown RBP19.26■□□□□ 0.67
SYNE4-204ENST00000465425 OTUD4Q01804 1114 aaKnown RBP19.26■□□□□ 0.67
SYNE4-204ENST00000465425 SPARCL1Q14515 664 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 HSDL1Q3SXM5 330 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 GALNTL6Q49A17 601 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 TSHZ1Q6ZSZ6 1077 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 FAM228AQ86W67 206 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 SLC35B2Q8TB61 432 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 ACTL9Q8TC94 416 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 PRCCQ92733 491 aaPredicted RBP19.26■□□□□ 0.67
SYNE4-204ENST00000465425 ZNF668Q96K58 619 aaPredicted RBP19.26■□□□□ 0.67
SYNE4-204ENST00000465425 SAE1Q9UBE0 346 aaPredicted RBP19.26■□□□□ 0.67
SYNE4-204ENST00000465425 EFR3BQ9Y2G0 817 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 PRPF4O43172 522 aaKnown RBP eCLIP19.26■□□□□ 0.67
SYNE4-204ENST00000465425 B4GALT4O60513 344 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 CST8O60676 142 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 LRCH4O75427 683 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 WDR4P57081 412 aaKnown RBP19.26■□□□□ 0.67
SYNE4-204ENST00000465425 SLC25A11Q02978 314 aaKnown RBP19.26■□□□□ 0.67
SYNE4-204ENST00000465425 BNIP1Q12981 228 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 VGLL4Q14135 290 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 TFDP1Q14186 410 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 ZNF667Q5HYK9 610 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 FITM2Q8N6M3 262 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 RSAD2Q8WXG1 361 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 KLHL29Q96CT2 875 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 FRMD8P1Q9BZ68 369 aaPredicted RBP19.26■□□□□ 0.67
SYNE4-204ENST00000465425 LHX5Q9H2C1 402 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 PSMC3IPQ9P2W1 217 aaPredicted RBP19.26■□□□□ 0.67
SYNE4-204ENST00000465425 POLIQ9UNA4 740 aa19.26■□□□□ 0.67
SYNE4-204ENST00000465425 ACKR2O00590 384 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 ASMTLO95671 621 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 FOXN2P32314 431 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 PHBP35232 272 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 RAP1GAPP47736 663 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 PKN2Q16513 984 aaKnown RBP19.25■□□□□ 0.67
SYNE4-204ENST00000465425 CGB2Q6NT52 195 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 CDR2LQ86X02 465 aaPredicted RBP19.25■□□□□ 0.67
SYNE4-204ENST00000465425 C4orf33Q8N1A6 199 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 JOSD2Q8TAC2 188 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 FNIP1Q8TF40 1166 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 RMDN2Q96LZ7 410 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 GPR20Q99678 358 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 NOD2Q9HC29 1040 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 SLC24A2Q9UI40 661 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 SSC5DA1L4H1 1573 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms