RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 SLC24A2Q9UI40 661 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 UTRNP46939 3433 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 B2RBV5 119 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 H3BRJ5 948 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 FCHO1O14526 889 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 FAM155BO75949 473 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 RTN3O95197 1032 aaPredicted RBP13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 HLA-DRAP01903 254 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 ENO1P06733 434 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 PSMC5P62195 406 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 OASLQ15646 514 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 KCNT1Q5JUK3 1230 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 SPOCD1Q6ZMY3 1216 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 FEZF2Q8TBJ5 459 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 SH3TC2Q8TF17 1288 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 SKA1Q96BD8 255 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 MCEEQ96PE7 176 aa13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.23□□□□□ -0.29
CLCNKA-204ENST00000464764 ABLIM1O14639 778 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 KITP10721 976 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 GNA15P30679 374 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 MRPS9P82933 396 aaKnown RBP13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 CDK16Q00536 496 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 KDSRQ06136 332 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 HSF5Q4G112 596 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 TDRD10Q5VZ19 366 aaKnown RBP13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 MAP4K3Q8IVH8 894 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 DCAKDQ8WVC6 231 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 CPT1BQ92523 772 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 BICD1Q96G01 975 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 TTC1Q99614 292 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 IDI2Q9BXS1 227 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 MARCOQ9UEW3 520 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 MRPL11Q9Y3B7 192 aaKnown RBP13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 PCNTO95613 3336 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 LPXNO60711 386 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 BAG2O95816 211 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 ACO1P21399 889 aaKnown RBP13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 VCPP55072 806 aaKnown RBP13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 AP1B1Q10567 949 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 TKFCQ3LXA3 575 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 SEZ6Q53EL9 994 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 ZNF394Q53GI3 561 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 PLEKHA7Q6IQ23 1121 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 ADGRD1Q6QNK2 874 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 CDHR3Q6ZTQ4 885 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 ABRAQ8N0Z2 381 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 CPXCR1Q8N123 301 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 CEP120Q8N960 986 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 C8orf37Q96NL8 207 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 AGO4Q9HCK5 861 aaKnown RBP13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 STX18Q9P2W9 335 aaKnown RBP13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 CHMP2BQ9UQN3 213 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 KAT6AQ92794 2004 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 SIPA1L1O43166 1804 aa13.22□□□□□ -0.29
CLCNKA-204ENST00000464764 MAP3K7O43318 606 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 CCNE2O96020 404 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 RARBP10826 455 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 PYGBP11216 843 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 EIF2AK2P19525 551 aaKnown RBP13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 GCLCP48506 637 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 FAAP100Q0VG06 881 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 RASA2Q15283 850 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 LRRC36Q1X8D7 754 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 MTHFD1LQ6UB35 978 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 CDAN1Q8IWY9 1227 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 PALM2Q8IXS6 379 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 RCOR2Q8IZ40 523 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 TMEM174Q8WUU8 243 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 PRMT6Q96LA8 375 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 TUBGCP5Q96RT8 1024 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 FOXP3Q9BZS1 431 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 STRCQ7RTU9 1775 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 TCP10L2B9ZVM9 353 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 ATP2A1O14983 1001 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 RNF8O76064 485 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 TMEM63AO94886 807 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 MT-ND3P03897 115 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 MYCLP12524 364 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 ETS2P15036 469 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 SP4Q02446 784 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 LMNB2Q03252 620 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 DMP1Q13316 513 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 ZBTB41Q5SVQ8 909 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 CES4AQ5XG92 561 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 ANO5Q75V66 913 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 LARGE2Q8N3Y3 721 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 TMC2Q8TDI7 906 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 OXNAD1Q96HP4 312 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 ZNF184Q99676 751 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 SENP7Q9BQF6 1050 aa13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 MRPL47Q9HD33 250 aaKnown RBP13.21□□□□□ -0.29
CLCNKA-204ENST00000464764 hCG_1818297A0A087WSY0 165 aa13.21□□□□□ -0.3
CLCNKA-204ENST00000464764 CCDC195A0A1B0GUA6 201 aa13.21□□□□□ -0.3
CLCNKA-204ENST00000464764 AVILO75366 819 aa13.21□□□□□ -0.3
CLCNKA-204ENST00000464764 VNN1O95497 513 aa13.21□□□□□ -0.3
CLCNKA-204ENST00000464764 WDR44Q5JSH3 913 aa13.21□□□□□ -0.3
CLCNKA-204ENST00000464764 CCDC62Q6P9F0 684 aa13.21□□□□□ -0.3
CLCNKA-204ENST00000464764 IZUMO2Q6UXV1 221 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms