RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 MAGEC2Q9UBF1 373 aaPredicted RBP15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 NME7Q9Y5B8 376 aa15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 PTPN1P18031 435 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 MTIF2P46199 727 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 EPHB3P54753 998 aa15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 ZP2Q05996 745 aa15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 PLD1Q13393 1074 aa15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 MGAT5BQ3V5L5 792 aa15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 C4orf50Q6ZRC1 276 aa15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 C11orf57Q6ZUT1 292 aaPredicted RBP15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 SPATA2LQ8IUW3 424 aaPredicted RBP15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 ELMOD1Q8N336 334 aa15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 TTC9BQ8N6N2 239 aa15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 MYCBPAPQ8TBZ2 947 aa15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 TATDN2Q93075 761 aa15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 RPGRIP1Q96KN7 1286 aa15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 ZNF512Q96ME7 567 aaPredicted RBP15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 NECAB3Q96P71 396 aaPredicted RBP15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 SEPT5Q99719 369 aaPredicted RBP15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 DNAJC25Q9H1X3 360 aa15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 CRTAC1Q9NQ79 661 aa15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 SAMSN1Q9NSI8 373 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 DNMT3BQ9UBC3 853 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 NR2E1Q9Y466 385 aa15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 NFE2L3Q9Y4A8 694 aa15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 YIPF1Q9Y548 306 aa15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 DOCK6Q96HP0 2047 aa15.49■□□□□ 0.07
SQSTM1-205ENST00000464493 CLUHO75153 1309 aa15.48■□□□□ 0.07
SQSTM1-205ENST00000464493 SOAT2O75908 522 aa15.48■□□□□ 0.07
SQSTM1-205ENST00000464493 HAPLN1P10915 354 aaPredicted RBP15.48■□□□□ 0.07
SQSTM1-205ENST00000464493 PTPN2P17706 415 aa15.48■□□□□ 0.07
SQSTM1-205ENST00000464493 NDST1P52848 882 aa15.48■□□□□ 0.07
SQSTM1-205ENST00000464493 CCDC142Q17RM4 750 aa15.48■□□□□ 0.07
SQSTM1-205ENST00000464493 CFAP221Q4G0U5 840 aa15.48■□□□□ 0.07
SQSTM1-205ENST00000464493 HSP90AA4PQ58FG1 418 aa15.48■□□□□ 0.07
SQSTM1-205ENST00000464493 UNC93AQ86WB7 457 aa15.48■□□□□ 0.07
SQSTM1-205ENST00000464493 B3GALNT2Q8NCR0 500 aa15.48■□□□□ 0.07
SQSTM1-205ENST00000464493 FUBP3Q96I24 572 aaKnown RBP eCLIP15.48■□□□□ 0.07
SQSTM1-205ENST00000464493 TNIP3Q96KP6 325 aa15.48■□□□□ 0.07
SQSTM1-205ENST00000464493 DPEP3Q9H4B8 488 aa15.48■□□□□ 0.07
SQSTM1-205ENST00000464493 ABCB6Q9NP58 842 aa15.48■□□□□ 0.07
SQSTM1-205ENST00000464493 HCFC1R1Q9NWW0 138 aa15.48■□□□□ 0.07
SQSTM1-205ENST00000464493 CEP72Q9P209 647 aa15.48■□□□□ 0.07
SQSTM1-205ENST00000464493 C19orf67A6NJJ6 358 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 KCNJ18B7U540 433 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 CD58P19256 250 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 FSHRP23945 695 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 CYP2F1P24903 491 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 NTHL1P78549 312 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 CYP27A1Q02318 531 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 INCA1Q0VD86 236 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 LRMPQ12912 555 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 KCNJ12Q14500 433 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 PABPC1LQ4VXU2 614 aaKnown RBP15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 MDH1BQ5I0G3 518 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 IQCEQ6IPM2 695 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 EHBP1Q8NDI1 1231 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 LMO3Q8TAP4 145 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 MYLPFQ96A32 169 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 PCED1BQ96HM7 432 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 LPIN3Q9BQK8 851 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 CORO1BQ9BR76 489 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 NAT10Q9H0A0 1025 aaKnown RBP15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 USTQ9Y2C2 406 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 ASB3Q9Y575 518 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 NCOR1O75376 2440 aa15.47■□□□□ 0.07
SQSTM1-205ENST00000464493 LOC730098B7Z3J9 87 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 RHOP08100 348 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 SP100P23497 879 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 EEF1GP26641 437 aaKnown RBP15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 SSTR3P32745 418 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 MYL5Q02045 173 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 CUL2Q13617 745 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 MAN2A1Q16706 1144 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 ANO6Q4KMQ2 910 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 TCP11X2Q5H9J9 407 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 OTOP3Q7RTS5 596 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 ACOT1Q86TX2 421 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 ITIH5Q86UX2 942 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 GJD3Q8N144 294 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 CRYBG2Q8N1P7 616 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 TTC39CQ8N584 583 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 FAM200AQ8TCP9 573 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 ACSF2Q96CM8 615 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 NT5C1BQ96P26 610 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 TUBGCP2Q9BSJ2 902 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 NT5C1AQ9BXI3 368 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 COL25A1Q9BXS0 654 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 DNAI2Q9GZS0 605 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 FAM124BQ9H5Z6 455 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 AVENQ9NQS1 362 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 CISHQ9NSE2 258 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 FANCLQ9NW38 375 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 HMGXB4Q9UGU5 601 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 TTC28Q96AY4 2481 aa15.46■□□□□ 0.07
SQSTM1-205ENST00000464493 DENND4AQ7Z401 1863 aa15.46■□□□□ 0.06
SQSTM1-205ENST00000464493 BDP1A6H8Y1 2624 aa15.46■□□□□ 0.06
SQSTM1-205ENST00000464493 NOTCH4Q99466 2003 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 SYCE3A1L190 88 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 CILPO75339 1184 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms