RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 MED15Q96RN5 788 aa18.22■□□□□ 0.51
VPS52-215ENST00000464425 SYT15Q9BQS2 421 aa18.22■□□□□ 0.51
VPS52-215ENST00000464425 FUCA2Q9BTY2 467 aa18.22■□□□□ 0.51
VPS52-215ENST00000464425 SMYD3Q9H7B4 428 aa18.22■□□□□ 0.51
VPS52-215ENST00000464425 VRTNQ9H8Y1 702 aa18.22■□□□□ 0.51
VPS52-215ENST00000464425 MYO10Q9HD67 2058 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 DENND4AQ7Z401 1863 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 TACC1O75410 805 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 FGFR1OPO95684 399 aaKnown RBP18.21■□□□□ 0.51
VPS52-215ENST00000464425 MYL4P12829 197 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 LAMP2P13473 410 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 GTF2H1P32780 548 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 RAP1GAPP47736 663 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 TUFMP49411 452 aaKnown RBP18.21■□□□□ 0.51
VPS52-215ENST00000464425 NFE2Q16621 373 aaPredicted RBP18.21■□□□□ 0.51
VPS52-215ENST00000464425 DCAF17Q5H9S7 520 aaPredicted RBP18.21■□□□□ 0.51
VPS52-215ENST00000464425 CYP4A22Q5TCH4 519 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 TCERG1LQ5VWI1 586 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 FILIP1Q7Z7B0 1213 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 SPPL2BQ8TCT7 592 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 FGF13Q92913 245 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 TCEAL4Q96EI5 215 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 PKMYT1Q99640 499 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 LPIN3Q9BQK8 851 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 NAT10Q9H0A0 1025 aaKnown RBP18.21■□□□□ 0.51
VPS52-215ENST00000464425 DNAJC25Q9H1X3 360 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 TMEM8AQ9HCN3 771 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 EPS15L1Q9UBC2 864 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 HSFX1Q9UBD0 423 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 CDH9Q9ULB4 789 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 CDH7Q9ULB5 785 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 NME7Q9Y5B8 376 aa18.21■□□□□ 0.51
VPS52-215ENST00000464425 LRRN2O75325 713 aa18.2■□□□□ 0.5
VPS52-215ENST00000464425 ASS1P00966 412 aaKnown RBP18.2■□□□□ 0.5
VPS52-215ENST00000464425 HAPLN1P10915 354 aaPredicted RBP18.2■□□□□ 0.5
VPS52-215ENST00000464425 CCR2P41597 374 aa18.2■□□□□ 0.5
VPS52-215ENST00000464425 PTPN21Q16825 1174 aa18.2■□□□□ 0.5
VPS52-215ENST00000464425 KRT39Q6A163 491 aa18.2■□□□□ 0.5
VPS52-215ENST00000464425 FAM171BQ6P995 826 aa18.2■□□□□ 0.5
VPS52-215ENST00000464425 PDZD4Q76G19 769 aaPredicted RBP18.2■□□□□ 0.5
VPS52-215ENST00000464425 DNAJB7Q7Z6W7 309 aaPredicted RBP18.2■□□□□ 0.5
VPS52-215ENST00000464425 SPATA2LQ8IUW3 424 aaPredicted RBP18.2■□□□□ 0.5
VPS52-215ENST00000464425 ENOX1Q8TC92 643 aaKnown RBP18.2■□□□□ 0.5
VPS52-215ENST00000464425 GPR152Q8TDT2 470 aa18.2■□□□□ 0.5
VPS52-215ENST00000464425 GIPC2Q8TF65 315 aa18.2■□□□□ 0.5
VPS52-215ENST00000464425 RSAD2Q8WXG1 361 aa18.2■□□□□ 0.5
VPS52-215ENST00000464425 SDCBP2Q9H190 292 aa18.2■□□□□ 0.5
VPS52-215ENST00000464425 SMOC2Q9H3U7 446 aa18.2■□□□□ 0.5
VPS52-215ENST00000464425 KCNK12Q9HB15 430 aa18.2■□□□□ 0.5
VPS52-215ENST00000464425 CRTAC1Q9NQ79 661 aa18.2■□□□□ 0.5
VPS52-215ENST00000464425 ASAH2Q9NR71 780 aa18.2■□□□□ 0.5
VPS52-215ENST00000464425 ARMCX3Q9UH62 379 aaPredicted RBP18.2■□□□□ 0.5
VPS52-215ENST00000464425 FAM86C2PA6NEL3 165 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 A8MXQ7 604 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 NRG2O14511 850 aaPredicted RBP18.19■□□□□ 0.5
VPS52-215ENST00000464425 STX10O60499 249 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 GNA14O95837 355 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 FAM163BP0C2L3 166 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 P4HA1P13674 534 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 GJA1P17302 382 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 CEBPBP17676 345 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 ATF6P18850 670 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 CYP2F1P24903 491 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 GPR15P49685 360 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 MXI1P50539 228 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 ZXDAP98168 799 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 CCDC40Q4G0X9 1142 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 PRSS36Q5K4E3 855 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 SDHAF4Q5VUM1 108 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 TAF4BQ92750 862 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 SEMA4DQ92854 862 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 MCRS1Q96EZ8 462 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 NOTCH4Q99466 2003 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 BPIFA3Q9BQP9 254 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 SRRTQ9BXP5 876 aaKnown RBP18.19■□□□□ 0.5
VPS52-215ENST00000464425 IMPG2Q9BZV3 1241 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 DPEP3Q9H4B8 488 aa18.19■□□□□ 0.5
VPS52-215ENST00000464425 APOBEC3GQ9HC16 384 aaKnown RBP18.19■□□□□ 0.5
VPS52-215ENST00000464425 AVENQ9NQS1 362 aaPredicted RBP18.19■□□□□ 0.5
VPS52-215ENST00000464425 ZNF197O14709 1029 aa18.18■□□□□ 0.5
VPS52-215ENST00000464425 CAVIN2O95810 425 aa18.18■□□□□ 0.5
VPS52-215ENST00000464425 NOP14P78316 857 aaKnown RBP18.18■□□□□ 0.5
VPS52-215ENST00000464425 CYP27A1Q02318 531 aa18.18■□□□□ 0.5
VPS52-215ENST00000464425 CBWD6Q4V339 395 aa18.18■□□□□ 0.5
VPS52-215ENST00000464425 MDH1BQ5I0G3 518 aa18.18■□□□□ 0.5
VPS52-215ENST00000464425 CBWD3Q5JTY5 395 aa18.18■□□□□ 0.5
VPS52-215ENST00000464425 CBWD5Q5RIA9 395 aa18.18■□□□□ 0.5
VPS52-215ENST00000464425 POTEHQ6S545 545 aa18.18■□□□□ 0.5
VPS52-215ENST00000464425 C11orf57Q6ZUT1 292 aaPredicted RBP18.18■□□□□ 0.5
VPS52-215ENST00000464425 FRMD5Q7Z6J6 570 aa18.18■□□□□ 0.5
VPS52-215ENST00000464425 ITIH5Q86UX2 942 aa18.18■□□□□ 0.5
VPS52-215ENST00000464425 NPAS3Q8IXF0 933 aa18.18■□□□□ 0.5
VPS52-215ENST00000464425 EDAQ92838 391 aa18.18■□□□□ 0.5
VPS52-215ENST00000464425 PSMG2Q969U7 264 aa18.18■□□□□ 0.5
VPS52-215ENST00000464425 MYLPFQ96A32 169 aa18.18■□□□□ 0.5
VPS52-215ENST00000464425 METTL14Q9HCE5 456 aaKnown RBP18.18■□□□□ 0.5
VPS52-215ENST00000464425 ZNF334Q9HCZ1 680 aaPredicted RBP18.18■□□□□ 0.5
VPS52-215ENST00000464425 MAGEC2Q9UBF1 373 aaPredicted RBP18.18■□□□□ 0.5
VPS52-215ENST00000464425 SORCS3Q9UPU3 1222 aa18.18■□□□□ 0.5
VPS52-215ENST00000464425 ASB3Q9Y575 518 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms