RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TTMPQ5BVD1 217 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 C1orf53Q5VUE5 145 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 TMEM270Q6UE05 265 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 AGMOQ6ZNB7 445 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 MRPL10Q7Z7H8 261 aaKnown RBP15.4■□□□□ 0.06
COL5A1-205ENST00000464187 ZNF677Q86XU0 584 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 ANKLE1Q8NAG6 615 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 ARL8AQ96BM9 186 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 TOX2Q96NM4 488 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 TRIM51Q9BSJ1 452 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 GOLGA6AQ9NYA3 693 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 CNOT8Q9UFF9 292 aaKnown RBP15.4■□□□□ 0.06
COL5A1-205ENST00000464187 GOLGA6L10A0A0M3HER8 536 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 DCDC2CA8MYV0 355 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 PTGESO14684 152 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 DAPK3O43293 454 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 XPOTO43592 962 aaKnown RBP15.4■□□□□ 0.06
COL5A1-205ENST00000464187 NBNO60934 754 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 WEE2P0C1S8 567 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 IBSPP21815 317 aaPredicted RBP15.4■□□□□ 0.06
COL5A1-205ENST00000464187 CTNNA1P35221 906 aaKnown RBP15.4■□□□□ 0.06
COL5A1-205ENST00000464187 TLE2Q04725 743 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 FAAP100Q0VG06 881 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 GPNMBQ14956 572 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 PPP2R5EQ16537 467 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 SCARA5Q6ZMJ2 495 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 GSTCDQ8NEC7 633 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 FAM76AQ8TAV0 307 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 GAD1Q99259 594 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 POLIQ9UNA4 740 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 GIT1Q9Y2X7 761 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 PCDHB4Q9Y5E5 795 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 SPOPO43791 374 aa15.39■□□□□ 0.05
COL5A1-205ENST00000464187 STAU1O95793 577 aaKnown RBP15.39■□□□□ 0.05
COL5A1-205ENST00000464187 ATF7P17544 494 aaPredicted RBP15.39■□□□□ 0.05
COL5A1-205ENST00000464187 CAPN2P17655 700 aa15.39■□□□□ 0.05
COL5A1-205ENST00000464187 CD58P19256 250 aa15.39■□□□□ 0.05
COL5A1-205ENST00000464187 AFF1P51825 1210 aaKnown RBP15.39■□□□□ 0.05
COL5A1-205ENST00000464187 SOX4Q06945 474 aaPredicted RBP15.39■□□□□ 0.05
COL5A1-205ENST00000464187 SEL1L2Q5TEA6 688 aa15.39■□□□□ 0.05
COL5A1-205ENST00000464187 RTN4RL1Q86UN2 441 aaPredicted RBP15.39■□□□□ 0.05
COL5A1-205ENST00000464187 MCOLN2Q8IZK6 566 aa15.39■□□□□ 0.05
COL5A1-205ENST00000464187 UBR7Q8N806 425 aa15.39■□□□□ 0.05
COL5A1-205ENST00000464187 RNF169Q8NCN4 708 aa15.39■□□□□ 0.05
COL5A1-205ENST00000464187 FAXDC2Q96IV6 333 aa15.39■□□□□ 0.05
COL5A1-205ENST00000464187 HIPK3Q9H422 1215 aa15.39■□□□□ 0.05
COL5A1-205ENST00000464187 GOLGA2P5Q9HBQ8 144 aa15.39■□□□□ 0.05
COL5A1-205ENST00000464187 RGS18Q9NS28 235 aa15.39■□□□□ 0.05
COL5A1-205ENST00000464187 CISHQ9NSE2 258 aa15.39■□□□□ 0.05
COL5A1-205ENST00000464187 CNTN6Q9UQ52 1028 aa15.39■□□□□ 0.05
COL5A1-205ENST00000464187 CCDC66A2RUB6 948 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 ARL5CA6NH57 179 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 PPEF2O14830 753 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 PHF2O75151 1096 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 SKIP12755 728 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 CYP3A5P20815 502 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 BPIFB4P59827 614 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 MYO1EQ12965 1108 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 C9orf57Q5W0N0 161 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 ECHDC2Q86YB7 292 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 ZDHHC14Q8IZN3 488 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 PAWRQ96IZ0 340 aaKnown RBP15.38■□□□□ 0.05
COL5A1-205ENST00000464187 PPP1R10Q96QC0 940 aaKnown RBP15.38■□□□□ 0.05
COL5A1-205ENST00000464187 FTHL17Q9BXU8 183 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 BCO2Q9BYV7 579 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 DPH5Q9H2P9 285 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 AVENQ9NQS1 362 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-205ENST00000464187 FAM114A2Q9NRY5 505 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.38■□□□□ 0.05
COL5A1-205ENST00000464187 UTP11Q9Y3A2 253 aaKnown RBP15.38■□□□□ 0.05
COL5A1-205ENST00000464187 PCDHA3Q9Y5H8 950 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 RALGAPA2Q2PPJ7 1873 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 KRT14P02533 472 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 CYP1A1P04798 512 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-205ENST00000464187 PYGMP11217 842 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 P4HA1P13674 534 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 ACTN2P35609 894 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 FLT3P36888 993 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 DR1Q01658 176 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 CENPCQ03188 943 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 UAP1Q16222 522 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-205ENST00000464187 SLC24A5Q71RS6 500 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 LRRC52Q8N7C0 313 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 PRELID2Q8N945 189 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 RBBP8NLQ8NC74 664 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-205ENST00000464187 DBF4BQ8NFT6 615 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 LINC01599Q8WXQ3 324 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 CPA5Q8WXQ8 436 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 PGBD4Q96DM1 585 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 SCLYQ96I15 445 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 TMEM106CQ9BVX2 250 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 RAB17Q9H0T7 212 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 RSAD1Q9HA92 442 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 ATP11BQ9Y2G3 1177 aa15.38■□□□□ 0.05
COL5A1-205ENST00000464187 FAM187AA6NFU0 413 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 C9IYK1 514 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 PIRO00625 290 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 THP07101 528 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 CFHP08603 1231 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 HSD17B3P37058 310 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms