RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 GPR15P49685 360 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 DNM1Q05193 864 aaKnown RBP20.25■□□□□ 0.83
SF3A1-205ENST00000463818 MYO1EQ12965 1108 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 SOWAHAQ2M3V2 549 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 INTS6LQ5JSJ4 861 aaKnown RBP20.25■□□□□ 0.83
SF3A1-205ENST00000463818 RESP18Q5W5W9 173 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 NELFCDQ8IXH7 590 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 HPDLQ96IR7 371 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 GCNAQ96QF7 691 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 AGPAT3Q9NRZ7 376 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 OBP2AQ9NY56 170 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 RCOR1Q9UKL0 485 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 GTF3C4Q9UKN8 822 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 CFAP45Q9UL16 551 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 PTPRJQ12913 1337 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 ANK1P16157 1881 aa20.24■□□□□ 0.83
SF3A1-205ENST00000463818 GABRDO14764 452 aa20.24■□□□□ 0.83
SF3A1-205ENST00000463818 HCRTO43612 131 aa20.24■□□□□ 0.83
SF3A1-205ENST00000463818 F11P03951 625 aa20.24■□□□□ 0.83
SF3A1-205ENST00000463818 CYP2F1P24903 491 aa20.24■□□□□ 0.83
SF3A1-205ENST00000463818 AFMP43652 599 aa20.24■□□□□ 0.83
SF3A1-205ENST00000463818 KPNA1P52294 538 aaPredicted RBP20.24■□□□□ 0.83
SF3A1-205ENST00000463818 MLLT6P55198 1093 aaPredicted RBP20.24■□□□□ 0.83
SF3A1-205ENST00000463818 EHHADHQ08426 723 aa20.24■□□□□ 0.83
SF3A1-205ENST00000463818 MTAPQ13126 283 aa20.24■□□□□ 0.83
SF3A1-205ENST00000463818 DDR2Q16832 855 aa20.24■□□□□ 0.83
SF3A1-205ENST00000463818 SDHAF4Q5VUM1 108 aa20.24■□□□□ 0.83
SF3A1-205ENST00000463818 ADGRF2Q8IZF7 708 aa20.24■□□□□ 0.83
SF3A1-205ENST00000463818 SPATA18Q8TC71 538 aa20.24■□□□□ 0.83
SF3A1-205ENST00000463818 SCFD1Q8WVM8 642 aa20.24■□□□□ 0.83
SF3A1-205ENST00000463818 ZFYVE19Q96K21 471 aa20.24■□□□□ 0.83
SF3A1-205ENST00000463818 PKMYT1Q99640 499 aa20.24■□□□□ 0.83
SF3A1-205ENST00000463818 C8orf33Q9H7E9 229 aaPredicted RBP20.24■□□□□ 0.83
SF3A1-205ENST00000463818 PVALEFA0A1B0GWK0 134 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 PRAMEF12O95522 483 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 CSH1P0DML2 217 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 CSH2P0DML3 217 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 PCSK1P29120 753 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 SOX9P48436 509 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 CYP2J2P51589 502 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 NLRP12P59046 1061 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 RPL10AP62906 217 aaKnown RBP20.23■□□□□ 0.83
SF3A1-205ENST00000463818 CUL4BQ13620 913 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 SNRNP35Q16560 246 aaKnown RBP20.23■□□□□ 0.83
SF3A1-205ENST00000463818 ARHGAP29Q52LW3 1261 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 DPH6Q7L8W6 267 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 TRAPPC11Q7Z392 1133 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 LIMS2Q7Z4I7 341 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 TMEM150AQ86TG1 271 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 WDR49Q8IV35 697 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 STKLD1Q8NE28 680 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 TTC8Q8TAM2 541 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 LEO1Q8WVC0 666 aaPredicted RBP20.23■□□□□ 0.83
SF3A1-205ENST00000463818 SMG9Q9H0W8 520 aaKnown RBP20.23■□□□□ 0.83
SF3A1-205ENST00000463818 CHRDQ9H2X0 955 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 ABCB6Q9NP58 842 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 SLC39A2Q9NP94 309 aa20.23■□□□□ 0.83
SF3A1-205ENST00000463818 MAGED2Q9UNF1 606 aaPredicted RBP20.23■□□□□ 0.83
SF3A1-205ENST00000463818 MYBPHLA2RUH7 354 aa20.22■□□□□ 0.83
SF3A1-205ENST00000463818 SLC38A8A6NNN8 435 aa20.22■□□□□ 0.83
SF3A1-205ENST00000463818 KINO60870 393 aaKnown RBP20.22■□□□□ 0.83
SF3A1-205ENST00000463818 DLATP10515 647 aaKnown RBP20.22■□□□□ 0.83
SF3A1-205ENST00000463818 CHRNB1P11230 501 aa20.22■□□□□ 0.83
SF3A1-205ENST00000463818 SNRPFP62306 86 aaKnown RBP20.22■□□□□ 0.83
SF3A1-205ENST00000463818 CCDC142Q17RM4 750 aa20.22■□□□□ 0.83
SF3A1-205ENST00000463818 TSSK4Q6SA08 328 aa20.22■□□□□ 0.83
SF3A1-205ENST00000463818 CMTM8Q8IZV2 173 aa20.22■□□□□ 0.83
SF3A1-205ENST00000463818 CELF5Q8N6W0 485 aaKnown RBP20.22■□□□□ 0.83
SF3A1-205ENST00000463818 XXYLT1Q8NBI6 393 aa20.22■□□□□ 0.83
SF3A1-205ENST00000463818 BPIFB1Q8TDL5 484 aa20.22■□□□□ 0.83
SF3A1-205ENST00000463818 ATRIPQ8WXE1 791 aa20.22■□□□□ 0.83
SF3A1-205ENST00000463818 SERTAD1Q9UHV2 236 aa20.22■□□□□ 0.83
SF3A1-205ENST00000463818 ZMYM5Q9UJ78 669 aa20.22■□□□□ 0.83
SF3A1-205ENST00000463818 ATP2C2O75185 946 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 CST3P01034 146 aaPredicted RBP20.21■□□□□ 0.83
SF3A1-205ENST00000463818 TNNI1P19237 187 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 LMO2P25791 158 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 PSMD6Q15008 389 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 TXNDC8Q6A555 127 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 FAM171BQ6P995 826 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 MAMSTRQ6ZN01 415 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 HS2ST1Q7LGA3 356 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 SPATA2LQ8IUW3 424 aaPredicted RBP20.21■□□□□ 0.83
SF3A1-205ENST00000463818 GRAMD1CQ8IYS0 662 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 CEP57L1Q8IYX8 460 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 MAB21L3Q8N8X9 362 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 KBTBD7Q8WVZ9 684 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 CCDC127Q96BQ5 260 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 MSANTD3Q96H12 275 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 FNBP1Q96RU3 617 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 THG1LQ9NWX6 298 aaKnown RBP20.21■□□□□ 0.83
SF3A1-205ENST00000463818 ZSCAN32Q9NX65 697 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 GTSE1Q9NYZ3 720 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 PCDHGA2Q9Y5H1 932 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 UBE4BO95155 1302 aa20.21■□□□□ 0.83
SF3A1-205ENST00000463818 EP300Q09472 2414 aaPredicted RBP20.2■□□□□ 0.82
SF3A1-205ENST00000463818 SPECC1L-ADORA2AF8WAN1 911 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 PDGFRBP09619 1106 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 SLFN14P0C7P3 912 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 DDX6P26196 483 aaKnown RBP eCLIP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms