RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 PSMB7Q99436 277 aa20.14■□□□□ 0.81
CCDC78-206ENST00000463539 TBC1D13Q9NVG8 400 aa20.14■□□□□ 0.81
CCDC78-206ENST00000463539 CYTH4Q9UIA0 394 aa20.14■□□□□ 0.81
CCDC78-206ENST00000463539 STRIP2Q9ULQ0 834 aa20.14■□□□□ 0.81
CCDC78-206ENST00000463539 UQCRHLA0A096LP55 91 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 UQCRHP07919 91 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 ODC1P11926 461 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 GPD2P43304 727 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 DSC1Q08554 894 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 TIGD5Q53EQ6 642 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 ARHGAP17Q68EM7 881 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 PLEKHA7Q6IQ23 1121 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 DCLRE1AQ6PJP8 1040 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 NT5DC3Q86UY8 548 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 SYNCQ9H7C4 482 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 ABCB6Q9NP58 842 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 PARVAQ9NVD7 372 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 HESX1Q9UBX0 185 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 ANAPC7Q9UJX3 599 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 AMFRQ9UKV5 643 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 TMEM110-MUSTN1A8MSY1 372 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 GABRDO14764 452 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 HOXA2O43364 376 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 KIF4AO95239 1232 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 PDCLQ13371 301 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 MAMLD1Q13495 774 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 MESDQ14696 234 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 PTPN20Q4JDL3 420 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 ZNF280BQ86YH2 543 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 CEP112Q8N8E3 955 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 UBA3Q8TBC4 463 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 HASPINQ8TF76 798 aa20.13■□□□□ 0.81
CCDC78-206ENST00000463539 FAM193BQ96PV7 902 aaPredicted RBP20.13■□□□□ 0.81
CCDC78-206ENST00000463539 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.12■□□□□ 0.81
CCDC78-206ENST00000463539 DDHD2O94830 711 aa20.12■□□□□ 0.81
CCDC78-206ENST00000463539 CXCR5P32302 372 aa20.12■□□□□ 0.81
CCDC78-206ENST00000463539 RFC2P35250 354 aa20.12■□□□□ 0.81
CCDC78-206ENST00000463539 GTF2F1P35269 517 aaKnown RBP eCLIP20.12■□□□□ 0.81
CCDC78-206ENST00000463539 LHX1P48742 406 aa20.12■□□□□ 0.81
CCDC78-206ENST00000463539 DNAJC24Q6P3W2 148 aa20.12■□□□□ 0.81
CCDC78-206ENST00000463539 B3GALNT2Q8NCR0 500 aa20.12■□□□□ 0.81
CCDC78-206ENST00000463539 BTBD6Q96KE9 485 aa20.12■□□□□ 0.81
CCDC78-206ENST00000463539 CAPZA3Q96KX2 299 aa20.12■□□□□ 0.81
CCDC78-206ENST00000463539 RNF216Q9NWF9 866 aaPredicted RBP20.12■□□□□ 0.81
CCDC78-206ENST00000463539 DDX43Q9NXZ2 648 aaKnown RBP20.12■□□□□ 0.81
CCDC78-206ENST00000463539 I3L4J1 428 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 ZNF185O15231 689 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 B4GALT3O60512 393 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 CYP4A22Q5TCH4 519 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 COLGALT2Q8IYK4 626 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 CPXM1Q96SM3 734 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 LPIN3Q9BQK8 851 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 PRDM5Q9NQX1 630 aaPredicted RBP20.11■□□□□ 0.81
CCDC78-206ENST00000463539 TIMM13Q9Y5L4 95 aaPredicted RBP20.11■□□□□ 0.81
CCDC78-206ENST00000463539 ALG6Q9Y672 507 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 CCDC130P13994 396 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 ACAT1P24752 427 aaKnown RBP20.11■□□□□ 0.81
CCDC78-206ENST00000463539 BRCC3P46736 316 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 PSMC1P62191 440 aaKnown RBP20.11■□□□□ 0.81
CCDC78-206ENST00000463539 CNKSR3Q6P9H4 555 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 CD300LGQ6UXG3 332 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 TTC30AQ86WT1 665 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 METTL23Q86XA0 190 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 NPAS4Q8IUM7 802 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 C3orf20Q8ND61 904 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 LRRN4CLQ8ND94 238 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 IPO4Q8TEX9 1081 aaKnown RBP20.11■□□□□ 0.81
CCDC78-206ENST00000463539 COG1Q8WTW3 980 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 RSPH1Q8WYR4 309 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 C18orf8Q96DM3 657 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 HES6Q96HZ4 224 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 DSEQ9UL01 958 aa20.11■□□□□ 0.81
CCDC78-206ENST00000463539 ARHGEF37A1IGU5 675 aa20.1■□□□□ 0.81
CCDC78-206ENST00000463539 M0QZQ0 153 aa20.1■□□□□ 0.81
CCDC78-206ENST00000463539 MYO1FO00160 1098 aa20.1■□□□□ 0.81
CCDC78-206ENST00000463539 KCNK3O14649 394 aa20.1■□□□□ 0.81
CCDC78-206ENST00000463539 ITGB1P05556 798 aa20.1■□□□□ 0.81
CCDC78-206ENST00000463539 SETSIPP0DME0 302 aa20.1■□□□□ 0.81
CCDC78-206ENST00000463539 ADORA2BP29275 332 aa20.1■□□□□ 0.81
CCDC78-206ENST00000463539 OR1G1P47890 313 aa20.1■□□□□ 0.81
CCDC78-206ENST00000463539 CKAP4Q07065 602 aaKnown RBP20.1■□□□□ 0.81
CCDC78-206ENST00000463539 IKBKEQ14164 716 aa20.1■□□□□ 0.81
CCDC78-206ENST00000463539 PKDCCQ504Y2 493 aa20.1■□□□□ 0.81
CCDC78-206ENST00000463539 CRIPAKQ8N1N5 446 aa20.1■□□□□ 0.81
CCDC78-206ENST00000463539 SPATA18Q8TC71 538 aa20.1■□□□□ 0.81
CCDC78-206ENST00000463539 SLC2A14Q8TDB8 520 aa20.1■□□□□ 0.81
CCDC78-206ENST00000463539 CASD1Q96PB1 797 aa20.1■□□□□ 0.81
CCDC78-206ENST00000463539 TRIM7Q9C029 511 aa20.1■□□□□ 0.81
CCDC78-206ENST00000463539 ST7Q9NRC1 585 aa20.1■□□□□ 0.81
CCDC78-206ENST00000463539 F8W810 466 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 CTIFO43310 598 aaKnown RBP20.09■□□□□ 0.81
CCDC78-206ENST00000463539 PFKMP08237 780 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 PTPN1P18031 435 aaKnown RBP20.09■□□□□ 0.81
CCDC78-206ENST00000463539 COMTP21964 271 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 GATMP50440 423 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 ANKRD52Q8NB46 1076 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 FEZF2Q8TBJ5 459 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 SUSD3Q96L08 255 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 MRPL9Q9BYD2 267 aaKnown RBP20.09■□□□□ 0.81
CCDC78-206ENST00000463539 MIS12Q9H081 205 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms