RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 GDPD2Q9HCC8 539 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 EHD2Q9NZN4 543 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 MAGEC2Q9UBF1 373 aaPredicted RBP14.03□□□□□ -0.16
HDAC1-203ENST00000463172 TRAF3IP3Q9Y228 551 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 SIT1Q9Y3P8 196 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 PTPRJQ12913 1337 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 WDFY4Q6ZS81 3184 aa14.02□□□□□ -0.16
HDAC1-203ENST00000463172 NUP210Q8TEM1 1887 aaPredicted RBP14.02□□□□□ -0.16
HDAC1-203ENST00000463172 SOBPA7XYQ1 873 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 GABRDO14764 452 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 NCAM2O15394 837 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 TACC1O75410 805 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 SOAT2O75908 522 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 KRT13P13646 458 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 NPR3P17342 541 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 ACAT1P24752 427 aaKnown RBP14.02□□□□□ -0.17
HDAC1-203ENST00000463172 DDX6P26196 483 aaKnown RBP eCLIP14.02□□□□□ -0.17
HDAC1-203ENST00000463172 GNL1P36915 607 aaPredicted RBP14.02□□□□□ -0.17
HDAC1-203ENST00000463172 STARD6P59095 220 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 WDR72Q3MJ13 1102 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 CFAP221Q4G0U5 840 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 SLC44A4Q53GD3 710 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 GPR158Q5T848 1215 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 CEP135Q66GS9 1140 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 CWF19L1Q69YN2 538 aaKnown RBP14.02□□□□□ -0.17
HDAC1-203ENST00000463172 C1orf228Q6PIY5 440 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 TMC8Q8IU68 726 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 GUF1Q8N442 669 aaKnown RBP14.02□□□□□ -0.17
HDAC1-203ENST00000463172 TTC9BQ8N6N2 239 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 GIPC2Q8TF65 315 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 ATOH1Q92858 354 aaPredicted RBP14.02□□□□□ -0.17
HDAC1-203ENST00000463172 CEP295NLQ96MC4 621 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 NELL2Q99435 816 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 LPIN3Q9BQK8 851 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 SYT15Q9BQS2 421 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 LRRC3Q9BY71 257 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 DNAI2Q9GZS0 605 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 GOLPH3LQ9H4A5 285 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 DMAC2Q9NW81 257 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 GTF3C4Q9UKN8 822 aa14.02□□□□□ -0.17
HDAC1-203ENST00000463172 ATP8B3O60423 1300 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 KANSL1LA0AUZ9 987 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 MAN2B1O00754 1011 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 IKBKBO14920 756 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 ZNF263O14978 683 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 MAPK13O15264 365 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 MOSPD3O75425 235 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 GJA1P17302 382 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 ATF6P18850 670 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 NR2F2P24468 414 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 ANXA13P27216 316 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 MAGEA9P43362 315 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 MAGEA11P43364 429 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 FAM160A1Q05DH4 1040 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 NFIL3Q16649 462 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 ZNF699Q32M78 642 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 ZNF667Q5HYK9 610 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 VSTM1Q6UX27 236 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 ZNF852Q6ZMS4 543 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 INTS8Q75QN2 995 aaKnown RBP14.01□□□□□ -0.17
HDAC1-203ENST00000463172 MFSD6LQ8IWD5 586 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 CCDC105Q8IYK2 499 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 CCDC150Q8NCX0 1101 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 OR6B3Q8NGW1 331 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 TMC2Q8TDI7 906 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 CSGALNACT1Q8TDX6 532 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 PARD3BQ8TEW8 1205 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 MRPS31Q92665 395 aaKnown RBP14.01□□□□□ -0.17
HDAC1-203ENST00000463172 BCO2Q9BYV7 579 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 OSBPL6Q9BZF3 934 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 IMPG2Q9BZV3 1241 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 TASP1Q9H6P5 420 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 THG1LQ9NWX6 298 aaKnown RBP14.01□□□□□ -0.17
HDAC1-203ENST00000463172 OBP2AQ9NY56 170 aa14.01□□□□□ -0.17
HDAC1-203ENST00000463172 DENND4CQ5VZ89 1909 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 LRRIQ3A6PVS8 624 aaPredicted RBP14□□□□□ -0.17
HDAC1-203ENST00000463172 HEPACAM2A8MVW5 462 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 TRIM66O15016 1216 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 CST3P01034 146 aaPredicted RBP14□□□□□ -0.17
HDAC1-203ENST00000463172 PRR29P0C7W0 189 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 GLULP15104 373 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 FCARP24071 287 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 WEE1P30291 646 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 GDI1P31150 447 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 PSMC2P35998 433 aaKnown RBP14□□□□□ -0.17
HDAC1-203ENST00000463172 AVPR1AP37288 418 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 CLDN10P78369 228 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 CYP27A1Q02318 531 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 ENPEPQ07075 957 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 TCF15Q12870 199 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 NCOA4Q13772 614 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 GRM2Q14416 872 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 SGSM1Q2NKQ1 1148 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 FAM171BQ6P995 826 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 GAREM2Q75VX8 874 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 LIMS2Q7Z4I7 341 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 OSTM1Q86WC4 334 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 SCN4BQ8IWT1 228 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 DTWD2Q8NBA8 298 aa14□□□□□ -0.17
HDAC1-203ENST00000463172 PJA1Q8NG27 643 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms