RNA–Protein interactions for RNA: ENST00000463094.5

MSH5-210, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-210ENST00000463094 MAN2B1O00754 1011 aa21.32■■□□□ 1
MSH5-210ENST00000463094 MOSPD3O75425 235 aa21.32■■□□□ 1
MSH5-210ENST00000463094 ATF6P18850 670 aa21.32■■□□□ 1
MSH5-210ENST00000463094 VIPR2P41587 438 aa21.32■■□□□ 1
MSH5-210ENST00000463094 NDUFA8P51970 172 aa21.32■■□□□ 1
MSH5-210ENST00000463094 AP3M2P53677 418 aa21.32■■□□□ 1
MSH5-210ENST00000463094 STK4Q13043 487 aa21.32■■□□□ 1
MSH5-210ENST00000463094 BIRC3Q13489 604 aa21.32■■□□□ 1
MSH5-210ENST00000463094 SOWAHAQ2M3V2 549 aa21.32■■□□□ 1
MSH5-210ENST00000463094 VITQ6UXI7 678 aa21.32■■□□□ 1
MSH5-210ENST00000463094 MFSD6LQ8IWD5 586 aa21.32■■□□□ 1
MSH5-210ENST00000463094 LRRC3Q9BY71 257 aa21.32■■□□□ 1
MSH5-210ENST00000463094 ZNF334Q9HCZ1 680 aaPredicted RBP21.32■■□□□ 1
MSH5-210ENST00000463094 HEBP1Q9NRV9 189 aa21.32■■□□□ 1
MSH5-210ENST00000463094 UXTQ9UBK9 157 aaPredicted RBP21.32■■□□□ 1
MSH5-210ENST00000463094 GTF3C4Q9UKN8 822 aa21.32■■□□□ 1
MSH5-210ENST00000463094 MAGED2Q9UNF1 606 aaPredicted RBP21.32■■□□□ 1
MSH5-210ENST00000463094 FRMD4BQ9Y2L6 1034 aa21.32■■□□□ 1
MSH5-210ENST00000463094 DOCK6Q96HP0 2047 aa21.32■■□□□ 1
MSH5-210ENST00000463094 TSC2P49815 1807 aa21.32■■□□□ 1
MSH5-210ENST00000463094 SCN1AP35498 2009 aa21.31■■□□□ 1
MSH5-210ENST00000463094 CALUO43852 315 aaPredicted RBP21.31■■□□□ 1
MSH5-210ENST00000463094 MAGEA9P43362 315 aa21.31■■□□□ 1
MSH5-210ENST00000463094 NUCB2P80303 420 aa21.31■■□□□ 1
MSH5-210ENST00000463094 ARID3BQ8IVW6 561 aaPredicted RBP21.31■■□□□ 1
MSH5-210ENST00000463094 CXorf38Q8TB03 319 aa21.31■■□□□ 1
MSH5-210ENST00000463094 SYAP1Q96A49 352 aaPredicted RBP21.31■■□□□ 1
MSH5-210ENST00000463094 FUBP3Q96I24 572 aaKnown RBP eCLIP21.31■■□□□ 1
MSH5-210ENST00000463094 SYT15Q9BQS2 421 aa21.31■■□□□ 1
MSH5-210ENST00000463094 OSBPL6Q9BZF3 934 aa21.31■■□□□ 1
MSH5-210ENST00000463094 TASP1Q9H6P5 420 aa21.31■■□□□ 1
MSH5-210ENST00000463094 CDH9Q9ULB4 789 aa21.31■■□□□ 1
MSH5-210ENST00000463094 NOTCH4Q99466 2003 aa21.3■■□□□ 1
MSH5-210ENST00000463094 KLRC4O43908 158 aa21.3■■□□□ 1
MSH5-210ENST00000463094 AVPR1AP37288 418 aa21.3■■□□□ 1
MSH5-210ENST00000463094 WDR72Q3MJ13 1102 aa21.3■■□□□ 1
MSH5-210ENST00000463094 GAREM2Q75VX8 874 aa21.3■■□□□ 1
MSH5-210ENST00000463094 SCN4BQ8IWT1 228 aa21.3■■□□□ 1
MSH5-210ENST00000463094 OR6B3Q8NGW1 331 aa21.3■■□□□ 1
MSH5-210ENST00000463094 MRPS31Q92665 395 aaKnown RBP21.3■■□□□ 1
MSH5-210ENST00000463094 CHAMP1Q96JM3 812 aa21.3■■□□□ 1
MSH5-210ENST00000463094 PHOX2BQ99453 314 aa21.3■■□□□ 1
MSH5-210ENST00000463094 LTB4R2Q9NPC1 389 aa21.3■■□□□ 1
MSH5-210ENST00000463094 TMLHEQ9NVH6 421 aa21.3■■□□□ 1
MSH5-210ENST00000463094 THG1LQ9NWX6 298 aaKnown RBP21.3■■□□□ 1
MSH5-210ENST00000463094 MAGEC2Q9UBF1 373 aaPredicted RBP21.3■■□□□ 1
MSH5-210ENST00000463094 PDXKO00764 312 aa21.29■■□□□ 1
MSH5-210ENST00000463094 GABRDO14764 452 aa21.29■■□□□ 1
MSH5-210ENST00000463094 CYP2F1P24903 491 aa21.29■■□□□ 1
MSH5-210ENST00000463094 DDX6P26196 483 aaKnown RBP eCLIP21.29■■□□□ 1
MSH5-210ENST00000463094 ANXA13P27216 316 aa21.29■■□□□ 1
MSH5-210ENST00000463094 ATICP31939 592 aa21.29■■□□□ 1
MSH5-210ENST00000463094 CYP4F8P98187 520 aa21.29■■□□□ 1
MSH5-210ENST00000463094 CYP27A1Q02318 531 aa21.29■■□□□ 1
MSH5-210ENST00000463094 CFAP221Q4G0U5 840 aa21.29■■□□□ 1
MSH5-210ENST00000463094 STXBP5Q5T5C0 1151 aa21.29■■□□□ 1
MSH5-210ENST00000463094 CEP135Q66GS9 1140 aa21.29■■□□□ 1
MSH5-210ENST00000463094 KRBA2Q6ZNG9 492 aa21.29■■□□□ 1
MSH5-210ENST00000463094 KIAA0895Q8NCT3 520 aa21.29■■□□□ 1
MSH5-210ENST00000463094 DDX23Q9BUQ8 820 aaKnown RBP21.29■■□□□ 1
MSH5-210ENST00000463094 TRPV5Q9NQA5 729 aa21.29■■□□□ 1
MSH5-210ENST00000463094 SPATA6Q9NWH7 488 aaPredicted RBP21.29■■□□□ 1
MSH5-210ENST00000463094 NXF1Q9UBU9 619 aaKnown RBP21.29■■□□□ 1
MSH5-210ENST00000463094 FAM237AA0A1B0GTK4 181 aa21.28■■□□□ 1
MSH5-210ENST00000463094 GFRA3O60609 400 aa21.28■■□□□ 1
MSH5-210ENST00000463094 NR3C1P04150 777 aa21.28■■□□□ 1
MSH5-210ENST00000463094 PDGFRBP09619 1106 aa21.28■■□□□ 1
MSH5-210ENST00000463094 CD72P21854 359 aa21.28■■□□□ 1
MSH5-210ENST00000463094 WARSP23381 471 aaKnown RBP21.28■■□□□ 1
MSH5-210ENST00000463094 GNL1P36915 607 aaPredicted RBP21.28■■□□□ 1
MSH5-210ENST00000463094 KPNA1P52294 538 aaPredicted RBP21.28■■□□□ 1
MSH5-210ENST00000463094 C1orf228Q6PIY5 440 aa21.28■■□□□ 1
MSH5-210ENST00000463094 ZC3H14Q6PJT7 736 aaKnown RBP21.28■■□□□ 1
MSH5-210ENST00000463094 OSTM1Q86WC4 334 aa21.28■■□□□ 1
MSH5-210ENST00000463094 SLC9A9Q8IVB4 645 aa21.28■■□□□ 1
MSH5-210ENST00000463094 C1orf210Q8IVY1 113 aa21.28■■□□□ 1
MSH5-210ENST00000463094 MSANTD3Q96H12 275 aa21.28■■□□□ 1
MSH5-210ENST00000463094 GDPD2Q9HCC8 539 aa21.28■■□□□ 1
MSH5-210ENST00000463094 OBP2AQ9NY56 170 aa21.28■■□□□ 1
MSH5-210ENST00000463094 EHD2Q9NZN4 543 aa21.28■■□□□ 1
MSH5-210ENST00000463094 PIAS3Q9Y6X2 628 aa21.28■■□□□ 1
MSH5-210ENST00000463094 CHADO15335 359 aa21.27■■□□□ 1
MSH5-210ENST00000463094 LAMTOR5O43504 91 aa21.27■■□□□ 1
MSH5-210ENST00000463094 ZNF202O95125 648 aa21.27■■□□□ 1
MSH5-210ENST00000463094 CST3P01034 146 aaPredicted RBP21.27■■□□□ 1
MSH5-210ENST00000463094 FAM163BP0C2L3 166 aa21.27■■□□□ 1
MSH5-210ENST00000463094 P4HA1P13674 534 aa21.27■■□□□ 1
MSH5-210ENST00000463094 GLULP15104 373 aa21.27■■□□□ 1
MSH5-210ENST00000463094 TRIM21P19474 475 aaKnown RBP21.27■■□□□ 1
MSH5-210ENST00000463094 RPL13P26373 211 aaKnown RBP21.27■■□□□ 1
MSH5-210ENST00000463094 GRIK1P39086 918 aa21.27■■□□□ 1
MSH5-210ENST00000463094 NBL1P41271 181 aa21.27■■□□□ 1
MSH5-210ENST00000463094 NLRP12P59046 1061 aa21.27■■□□□ 1
MSH5-210ENST00000463094 PSMC1P62191 440 aaKnown RBP21.27■■□□□ 1
MSH5-210ENST00000463094 DDR2Q16832 855 aa21.27■■□□□ 1
MSH5-210ENST00000463094 ZNF699Q32M78 642 aa21.27■■□□□ 1
MSH5-210ENST00000463094 ARHGAP29Q52LW3 1261 aa21.27■■□□□ 1
MSH5-210ENST00000463094 POTEHQ6S545 545 aa21.27■■□□□ 1
MSH5-210ENST00000463094 GPIHBP1Q8IV16 184 aa21.27■■□□□ 1
MSH5-210ENST00000463094 CELF5Q8N6W0 485 aaKnown RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms