RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 NUP43Q8NFH3 380 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 TRIM63Q969Q1 353 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 TMEM209Q96SK2 561 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 ITPAQ9BY32 194 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 FAM83DQ9H4H8 585 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 KCNK9Q9NPC2 374 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 STOML1Q9UBI4 398 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 ZNF212Q9UDV6 495 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 USP21Q9UK80 565 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 SMG5Q9UPR3 1016 aaKnown RBP3.43□□□□□ -1.86
SMC4-203ENST00000462668 TMEM233B4DJY2 109 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 H2AFB1P0C5Y9 115 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 H2AFB2P0C5Z0 115 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 PIM1P11309 404 aaPredicted RBP3.42□□□□□ -1.86
SMC4-203ENST00000462668 PECAM1P16284 738 aaPredicted RBP3.42□□□□□ -1.86
SMC4-203ENST00000462668 CDH2P19022 906 aaPredicted RBP3.42□□□□□ -1.86
SMC4-203ENST00000462668 FPR1P21462 350 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 CYP4F8P98187 520 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 SMAD4Q13485 552 aaKnown RBP3.42□□□□□ -1.86
SMC4-203ENST00000462668 VWA3BQ502W6 1294 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 FAM47AQ5JRC9 791 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 CIAPIN1Q6FI81 312 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 GATAD2AQ86YP4 633 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 YAF2Q8IY57 180 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 SPSB4Q96A44 273 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 WIPF1O43516 503 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 ARP10275 920 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 CSRP2Q16527 193 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 DPP8Q6V1X1 898 aaPredicted RBP3.42□□□□□ -1.86
SMC4-203ENST00000462668 RAB11FIP2Q7L804 512 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 ADGRA1Q86SQ6 560 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 SLC2A12Q8TD20 617 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 WDR92Q96MX6 357 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 ALPK1Q96QP1 1244 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 GPR20Q99678 358 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 BAG1Q99933 345 aaPredicted RBP3.42□□□□□ -1.86
SMC4-203ENST00000462668 EDEM3Q9BZQ6 932 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 USP44Q9H0E7 712 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 C2orf40Q9H1Z8 148 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 TRPV4Q9HBA0 871 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 RBPJLQ9UBG7 517 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 FER1L4A9Z1Z3 1794 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 A0A0G2JNJ9 132 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 ZC3H12DA2A288 527 aaKnown RBP3.42□□□□□ -1.86
SMC4-203ENST00000462668 PIP5K1BO14986 540 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 TBC1D4O60343 1298 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 ITGA10O75578 1167 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 PORP16435 677 aaPredicted RBP3.42□□□□□ -1.86
SMC4-203ENST00000462668 PSMC2P35998 433 aaKnown RBP3.42□□□□□ -1.86
SMC4-203ENST00000462668 SCAPQ12770 1279 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 FAM129CQ86XR2 697 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 IPCEF1Q8WWN9 437 aaPredicted RBP3.42□□□□□ -1.86
SMC4-203ENST00000462668 SCAMP4Q969E2 229 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 NR1H4Q96RI1 486 aaPredicted RBP3.42□□□□□ -1.86
SMC4-203ENST00000462668 NUDT16L1Q9BRJ7 211 aaKnown RBP3.42□□□□□ -1.86
SMC4-203ENST00000462668 BRF2Q9HAW0 419 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 CNNM1Q9NRU3 951 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 ETAA1Q9NY74 926 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 Q9UFV3 132 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 DERAQ9Y315 318 aa3.42□□□□□ -1.86
SMC4-203ENST00000462668 PSPNO60542 156 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 HNRNPA1P09651 372 aaKnown RBP eCLIP3.41□□□□□ -1.86
SMC4-203ENST00000462668 ABCD3P28288 659 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 PSMB10P40306 273 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 SKIDA1Q1XH10 827 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 LMBRD2Q68DH5 695 aaPredicted RBP3.41□□□□□ -1.86
SMC4-203ENST00000462668 CRTC1Q6UUV9 634 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 B4GALNT4Q76KP1 1039 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 ZUFSPQ96AP4 578 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 CCDC120Q96HB5 630 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 PRPF18Q99633 342 aaKnown RBP3.41□□□□□ -1.86
SMC4-203ENST00000462668 IRX2Q9BZI1 471 aaPredicted RBP3.41□□□□□ -1.86
SMC4-203ENST00000462668 TRIM5Q9C035 493 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 BARX1Q9HBU1 254 aaPredicted RBP3.41□□□□□ -1.86
SMC4-203ENST00000462668 PCDH18Q9HCL0 1135 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 FSCN3Q9NQT6 498 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 SLC22A11Q9NSA0 550 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 EPS15L1Q9UBC2 864 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 MORF4L1Q9UBU8 362 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 CNTN6Q9UQ52 1028 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 CEP83Q9Y592 693 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 P4HA2O15460 535 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 MTHFD1P11586 935 aaKnown RBP3.41□□□□□ -1.86
SMC4-203ENST00000462668 PFKLP17858 780 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 IGFBP6P24592 240 aaPredicted RBP3.41□□□□□ -1.86
SMC4-203ENST00000462668 ACSL1P33121 698 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 KRT2P35908 639 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 CPT1AP50416 773 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 DLGAP5Q15398 846 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 ATP2B3Q16720 1220 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 GAGE13Q4V321 117 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 MEX3CQ5U5Q3 659 aaKnown RBP3.41□□□□□ -1.86
SMC4-203ENST00000462668 GGT6Q6P531 493 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 ZSCAN30Q86W11 494 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 DNAJC5GQ8N7S2 189 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 COG8Q96MW5 612 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 PCDHAC1Q9H158 963 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 RRAGCQ9HB90 399 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 ATP8A2Q9NTI2 1148 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 ARGLU1Q9NWB6 273 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms