RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 RIBC1Q8N443 379 aaPredicted RBP17.84■□□□□ 0.45
ACTB-207ENST00000462494 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.84■□□□□ 0.459e-78■■□□□ 11.7
ACTB-207ENST00000462494 TRAPPC12Q8WVT3 735 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 ZBTB10Q96DT7 871 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 ANKRD36BP1Q96IX9 119 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 FAM167AQ96KS9 214 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 INO80BQ9C086 356 aaPredicted RBP17.84■□□□□ 0.45
ACTB-207ENST00000462494 KIF9Q9HAQ2 790 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 PCDHGC3Q9UN70 934 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 ACTL7BQ9Y614 415 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 SSC5DA1L4H1 1573 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 B4GALT5O43286 388 aa17.83■□□□□ 0.45
ACTB-207ENST00000462494 USP2O75604 605 aaPredicted RBP17.83■□□□□ 0.45
ACTB-207ENST00000462494 ARIH2O95376 493 aa17.83■□□□□ 0.45
ACTB-207ENST00000462494 ITGAVP06756 1048 aa17.83■□□□□ 0.45
ACTB-207ENST00000462494 EDNRBP24530 442 aa17.83■□□□□ 0.45
ACTB-207ENST00000462494 HIRAP54198 1017 aaPredicted RBP17.83■□□□□ 0.45
ACTB-207ENST00000462494 CDH8P55286 799 aa17.83■□□□□ 0.45
ACTB-207ENST00000462494 SURF1Q15526 300 aa17.83■□□□□ 0.45
ACTB-207ENST00000462494 PTPN20Q4JDL3 420 aa17.83■□□□□ 0.45
ACTB-207ENST00000462494 RNASEH2BQ5TBB1 312 aaKnown RBP17.83■□□□□ 0.45
ACTB-207ENST00000462494 FAM228AQ86W67 206 aa17.83■□□□□ 0.45
ACTB-207ENST00000462494 JOSD2Q8TAC2 188 aa17.83■□□□□ 0.45
ACTB-207ENST00000462494 SPATC1LQ9H0A9 340 aa17.83■□□□□ 0.45
ACTB-207ENST00000462494 XYLT2Q9H1B5 865 aa17.83■□□□□ 0.45
ACTB-207ENST00000462494 R3HDMLQ9H3Y0 253 aa17.83■□□□□ 0.45
ACTB-207ENST00000462494 SYNCQ9H7C4 482 aa17.83■□□□□ 0.45
ACTB-207ENST00000462494 ECT2Q9H8V3 914 aa17.83■□□□□ 0.45
ACTB-207ENST00000462494 ABLIM1O14639 778 aa17.83■□□□□ 0.44
ACTB-207ENST00000462494 MGRN1O60291 552 aa17.83■□□□□ 0.44
ACTB-207ENST00000462494 PGK2P07205 417 aa17.83■□□□□ 0.44
ACTB-207ENST00000462494 FOXN2P32314 431 aa17.83■□□□□ 0.44
ACTB-207ENST00000462494 PSMC1P62191 440 aaKnown RBP17.83■□□□□ 0.44
ACTB-207ENST00000462494 MKRN3Q13064 507 aaKnown RBP17.83■□□□□ 0.44
ACTB-207ENST00000462494 PKN2Q16513 984 aaKnown RBP17.83■□□□□ 0.44
ACTB-207ENST00000462494 ATF7IP2Q5U623 682 aa17.83■□□□□ 0.44
ACTB-207ENST00000462494 MPZL3Q6UWV2 235 aa17.83■□□□□ 0.44
ACTB-207ENST00000462494 CENPUQ71F23 418 aa17.83■□□□□ 0.44
ACTB-207ENST00000462494 TRABD2AQ86V40 505 aa17.83■□□□□ 0.44
ACTB-207ENST00000462494 C4orf33Q8N1A6 199 aa17.83■□□□□ 0.44
ACTB-207ENST00000462494 EMC1Q8N766 993 aa17.83■□□□□ 0.44
ACTB-207ENST00000462494 PITPNM3Q9BZ71 974 aa17.83■□□□□ 0.44
ACTB-207ENST00000462494 TRABDQ9H4I3 376 aa17.83■□□□□ 0.44
ACTB-207ENST00000462494 RGS17Q9UGC6 210 aaPredicted RBP17.83■□□□□ 0.44
ACTB-207ENST00000462494 BAIAP2L1Q9UHR4 511 aa17.83■□□□□ 0.44
ACTB-207ENST00000462494 CYTH4Q9UIA0 394 aa17.83■□□□□ 0.44
ACTB-207ENST00000462494 STRIP2Q9ULQ0 834 aa17.83■□□□□ 0.44
ACTB-207ENST00000462494 SNCAIPQ9Y6H5 919 aa17.83■□□□□ 0.44
ACTB-207ENST00000462494 TGFB3P10600 412 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 TAC1P20366 129 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 POLR2BP30876 1174 aaKnown RBP17.82■□□□□ 0.44
ACTB-207ENST00000462494 CDH5P33151 784 aaPredicted RBP17.82■□□□□ 0.44
ACTB-207ENST00000462494 PTPN7P35236 360 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 WDR4P57081 412 aaKnown RBP17.82■□□□□ 0.44
ACTB-207ENST00000462494 OTUD4Q01804 1114 aaKnown RBP17.82■□□□□ 0.44
ACTB-207ENST00000462494 CGB2Q6NT52 195 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 NIPA2Q8N8Q9 360 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 NKD2Q969F2 451 aaPredicted RBP17.82■□□□□ 0.44
ACTB-207ENST00000462494 THOC1Q96FV9 657 aaKnown RBP17.82■□□□□ 0.44
ACTB-207ENST00000462494 PCDH9Q9HC56 1237 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 ZBTB42B2RXF5 422 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 CST8O60676 142 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 LRCH4O75427 683 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 IL1R2P27930 398 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 YWHAEP62258 255 aaKnown RBP17.82■□□□□ 0.44
ACTB-207ENST00000462494 TMEM192Q8IY95 271 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 ACTL9Q8TC94 416 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 RMDN2Q96LZ7 410 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 GPR20Q99678 358 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 C2orf40Q9H1Z8 148 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 KLHL14Q9P2G3 628 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 PCSK1NQ9UHG2 260 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 PNMA3Q9UL41 463 aa17.82■□□□□ 0.44
ACTB-207ENST00000462494 C3orf70A6NLC5 250 aaPredicted RBP17.81■□□□□ 0.44
ACTB-207ENST00000462494 CXCL8P10145 99 aa17.81■□□□□ 0.44
ACTB-207ENST00000462494 CTCFP49711 727 aaPredicted RBP17.81■□□□□ 0.44
ACTB-207ENST00000462494 GDF10P55107 478 aa17.81■□□□□ 0.44
ACTB-207ENST00000462494 NCALDP61601 193 aa17.81■□□□□ 0.44
ACTB-207ENST00000462494 SLC25A11Q02978 314 aaKnown RBP17.81■□□□□ 0.44
ACTB-207ENST00000462494 GAD2Q05329 585 aa17.81■□□□□ 0.44
ACTB-207ENST00000462494 NR1H3Q13133 447 aa17.81■□□□□ 0.44
ACTB-207ENST00000462494 MTM1Q13496 603 aa17.81■□□□□ 0.44
ACTB-207ENST00000462494 MTFR1Q15390 333 aa17.81■□□□□ 0.44
ACTB-207ENST00000462494 EEF1DP3Q658K8 133 aa17.81■□□□□ 0.44
ACTB-207ENST00000462494 FITM2Q8N6M3 262 aa17.81■□□□□ 0.44
ACTB-207ENST00000462494 ARFGAP1Q8N6T3 406 aa17.81■□□□□ 0.44
ACTB-207ENST00000462494 PRCCQ92733 491 aaPredicted RBP17.81■□□□□ 0.44
ACTB-207ENST00000462494 SMC6Q96SB8 1091 aa17.81■□□□□ 0.44
ACTB-207ENST00000462494 METTL5Q9NRN9 209 aaKnown RBP17.81■□□□□ 0.44
ACTB-207ENST00000462494 CFAP73A6NFT4 308 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 SIGLEC16A6NMB1 481 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 ALOX15BO15296 676 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 ATP6V1G2O95670 118 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 CD48P09326 243 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 KCNJ2P63252 427 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 E2F5Q15329 346 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 HIF1AQ16665 826 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 HADHQ16836 314 aaKnown RBP17.8■□□□□ 0.44
ACTB-207ENST00000462494 GALNTL6Q49A17 601 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 TSHZ1Q6ZSZ6 1077 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms