RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 TAB2Q9NYJ8 693 aa8.73□□□□□ -1.01
SND1-202ENST00000461056 NXF1Q9UBU9 619 aaKnown RBP8.73□□□□□ -1.01
SND1-202ENST00000461056 CDH22Q9UJ99 828 aa8.73□□□□□ -1.01
SND1-202ENST00000461056 CDH9Q9ULB4 789 aa8.73□□□□□ -1.01
SND1-202ENST00000461056 COG5Q9UP83 839 aa8.73□□□□□ -1.01
SND1-202ENST00000461056 A0A1B0GTH6 734 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 H3BQ06 376 aaPredicted RBP8.72□□□□□ -1.01
SND1-202ENST00000461056 EPHB6O15197 1021 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 RFPL2O75678 378 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 SPATA31D3P0C874 917 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 HOXB8P17481 243 aaPredicted RBP8.72□□□□□ -1.01
SND1-202ENST00000461056 ATF6P18850 670 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 PCSK1P29120 753 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 PBX1P40424 430 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 MTIF2P46199 727 aaKnown RBP8.72□□□□□ -1.01
SND1-202ENST00000461056 COPB1P53618 953 aaKnown RBP8.72□□□□□ -1.01
SND1-202ENST00000461056 CACNA2D1P54289 1103 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 TNNC1P63316 161 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 TFF2Q03403 129 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 PDAP1Q13442 181 aaKnown RBP8.72□□□□□ -1.01
SND1-202ENST00000461056 LLGL2Q6P1M3 1020 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 GJB7Q6PEY0 223 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 SPATA31D4Q6ZUB0 917 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 UNC93AQ86WB7 457 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 GAS2L3Q86XJ1 694 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 PALB2Q86YC2 1186 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 GLYCTKQ8IVS8 523 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 C12orf76Q8N812 135 aaPredicted RBP8.72□□□□□ -1.01
SND1-202ENST00000461056 SLC4A11Q8NBS3 891 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.72□□□□□ -1.01
SND1-202ENST00000461056 MYCBPAPQ8TBZ2 947 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 SHC3Q92529 594 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 CASP10Q92851 521 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 HLA-CQ95604 372 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 PPP2R3CQ969Q6 453 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 SYT15Q9BQS2 421 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 CRACR2AQ9BSW2 395 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 LRRC3Q9BY71 257 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 NAT10Q9H0A0 1025 aaKnown RBP8.72□□□□□ -1.01
SND1-202ENST00000461056 OCEL1Q9H607 264 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 IGFLR1Q9H665 355 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 RTN4Q9NQC3 1192 aaKnown RBP8.72□□□□□ -1.01
SND1-202ENST00000461056 CISHQ9NSE2 258 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 ZDHHC7Q9NXF8 308 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 CLDND1Q9NY35 253 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 GCNT4Q9P109 453 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 CEP72Q9P209 647 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 YIPF1Q9Y548 306 aa8.72□□□□□ -1.01
SND1-202ENST00000461056 BECN2A8MW95 431 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 RNF225M0QZC1 329 aaPredicted RBP8.71□□□□□ -1.02
SND1-202ENST00000461056 C8AP07357 584 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 HNRNPA1P09651 372 aaKnown RBP eCLIP8.71□□□□□ -1.02
SND1-202ENST00000461056 HAPLN1P10915 354 aaPredicted RBP8.71□□□□□ -1.02
SND1-202ENST00000461056 PRKCSHP14314 528 aaPredicted RBP8.71□□□□□ -1.02
SND1-202ENST00000461056 PTPN1P18031 435 aaKnown RBP8.71□□□□□ -1.02
SND1-202ENST00000461056 KCNA5P22460 613 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 GNL1P36915 607 aaPredicted RBP8.71□□□□□ -1.02
SND1-202ENST00000461056 MAGEA11P43364 429 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 KLK7P49862 253 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 NDST1P52848 882 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 RAD23BP54727 409 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 EPHA5P54756 1037 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 PSMC1P62191 440 aaKnown RBP8.71□□□□□ -1.02
SND1-202ENST00000461056 ADCY1Q08828 1119 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 SMARCB1Q12824 385 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 ORC1Q13415 861 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 BMS1Q14692 1282 aaKnown RBP8.71□□□□□ -1.02
SND1-202ENST00000461056 EXOC3L4Q17RC7 722 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 UVSSAQ2YD98 709 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 SLC39A12Q504Y0 691 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 GBP6Q6ZN66 633 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 GPR149Q86SP6 731 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 METTL23Q86XA0 190 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 TMC8Q8IU68 726 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 FUKQ8N0W3 1084 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 B3GALNT2Q8NCR0 500 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 OLIG1Q8TAK6 271 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 SLC7A14Q8TBB6 771 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 C2orf15Q8WU43 125 aaKnown RBP8.71□□□□□ -1.02
SND1-202ENST00000461056 MYLPFQ96A32 169 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 JAKMIP2Q96AA8 810 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 PCED1BQ96HM7 432 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 FUBP3Q96I24 572 aaKnown RBP eCLIP8.71□□□□□ -1.02
SND1-202ENST00000461056 NAP1L5Q96NT1 182 aaPredicted RBP8.71□□□□□ -1.02
SND1-202ENST00000461056 NT5C1BQ96P26 610 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 ERGIC2Q96RQ1 377 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 MMS19Q96T76 1030 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 B3GNT5Q9BYG0 378 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 ADAM7Q9H2U9 754 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 SFXN1Q9H9B4 322 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 PLCB1Q9NQ66 1216 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 AVENQ9NQS1 362 aaPredicted RBP8.71□□□□□ -1.02
SND1-202ENST00000461056 APEX2Q9UBZ4 518 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 GTF3C4Q9UKN8 822 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 USP15Q9Y4E8 981 aaPredicted RBP8.71□□□□□ -1.02
SND1-202ENST00000461056 INSL5Q9Y5Q6 135 aa8.71□□□□□ -1.02
SND1-202ENST00000461056 PLXNA3P51805 1871 aa8.7□□□□□ -1.02
SND1-202ENST00000461056 SMTNL1A8MU46 457 aa8.7□□□□□ -1.02
SND1-202ENST00000461056 TEX33O43247 280 aa8.7□□□□□ -1.02
SND1-202ENST00000461056 AP5Z1O43299 807 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms